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branch: rosetta:commits 「№20551」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「ec708a4c4」← 「e805eb7bd」  code diff
Scheduled at: 2024-10-04 12:38:35.018630
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
linux.clang.cxx11thread.serialization.python37.PyRosetta.unit mac.clang.python310.PyRosetta.unit mac.clang.python38.PyRosetta.unit mac.clang.python39.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug graphics static beautification ubuntu.clang.code_quality.cppcheck ubuntu.gcc.code_quality.cppcheck code_quality.merge_size serialization linux.clang.code_quality.submodule_regression linux.gcc.code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: ec708a4c40449ea419c8fcac0d507440400bf75f←e805eb7bd2c890a788dfaa4e324a0535d87309cb Updated Ligand Motifs Code ---------------- Merge commit message: fixing location of funal return statement to be in correct location

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branch: rosetta:commits 「№20550」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「ec708a4c4」← 「1936c5cbc」  code diff
Scheduled at: 2024-10-04 12:33:05.916581
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
linux.clang.cxx11thread.serialization.python37.PyRosetta.unit mac.clang.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug static beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: ec708a4c40449ea419c8fcac0d507440400bf75f←1936c5cbc4bfa9afdf518b31106010b558cffff0 Updated Ligand Motifs Code ---------------- Merge commit message: fixing old variable conventions. Also making mymap pass into evaluate_motifs_of_pose as not const, because you can't use the [] operator on a const map

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branch: rosetta:commits 「№20549」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「ec708a4c4」← 「96c1434e1」  code diff
Scheduled at: 2024-10-04 12:19:57.734969
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
linux.clang.cxx11thread.serialization.python37.PyRosetta.unit mac.clang.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug static beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: ec708a4c40449ea419c8fcac0d507440400bf75f←96c1434e15e8ea10ccbbc660cf86c661ab303b57 Updated Ligand Motifs Code ---------------- Merge commit message: adding extra_pose_info_util to ILM.cc so that it can utilize add_comment. Also fixing bad variable naming where I accentally called the function instead of vector

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branch: rosetta:commits 「№20548」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「ec708a4c4」← 「ba0bf0ae0」  code diff
Scheduled at: 2024-10-04 12:12:44.473601
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
linux.clang.cxx11thread.serialization.python37.PyRosetta.unit mac.clang.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug graphics static beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: ec708a4c40449ea419c8fcac0d507440400bf75f←ba0bf0ae0bd393f638812ad68fdf15f714ef8ea3 Updated Ligand Motifs Code ---------------- Merge commit message: missing semicolon missing semicolon#

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branch: rosetta:commits 「№20547」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「ec708a4c4」← 「7ae51212d」  code diff
Scheduled at: 2024-10-04 12:08:39.697721
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
linux.clang.cxx11thread.serialization.python37.PyRosetta.unit mac.clang.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug graphics static beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: ec708a4c40449ea419c8fcac0d507440400bf75f←7ae51212d4c96a768c7274e2ddbed0741e32b84a Updated Ligand Motifs Code ---------------- Merge commit message: incliding motif_utils.hh to the ILM.hh file since it uses the motif_atoms type_def

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branch: rosetta:commits 「№20546」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「ec708a4c4」← 「6a070a6c5」  code diff
Scheduled at: 2024-10-04 12:01:51.460447
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
build.ninja_debug graphics static windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: ec708a4c40449ea419c8fcac0d507440400bf75f←6a070a6c5e5549e7daf02a2a5bb11b99165a2cbb Updated Ligand Motifs Code ---------------- Merge commit message: substantial update that moves the placed ligand motif collection code into a public function in a identify ligand motifs object

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branch: rosetta:commits 「№20545」
Commited by: Sergey Lyskov
GitHub Pull Request link: 「№187」
Merge: 「ba06f1143」← 「0afbe4394」  code diff
Scheduled at: 2024-10-04 11:00:49.974123
PyRosetta.notebook gcc-9.gcc.python37.PyRosetta.unit linux.clang.cxx11thread.serialization.python310.PyRosetta.unit linux.clang.cxx11thread.serialization.python37.PyRosetta.unit linux.clang.python310.PyRosetta.unit linux.gcc.python312.PyRosetta.unit m1.clang.python38.PyRosetta.unit m1.clang.python39.PyRosetta.unit mac.clang.python310.PyRosetta.unit mac.clang.python38.PyRosetta.unit mac.clang.python39.PyRosetta.unit ubuntu-20.04.clang.python39.PyRosetta.unit ubuntu-22.04.clang.python39.PyRosetta.unit ubuntu.clang.cxx11thread.serialization.python310.PyRosetta.unit ubuntu-20.04.clang.python39.unit ubuntu-22.04.clang.python39.unit

Pull Request №187 RosettaCommons/rosetta/main ← lyskov/rosetta/pyrosetta Merge: ba06f11430f370c2f265737635ed98d9f0323f27←0afbe43946cc862ba58b83cb1e31b2bf649c0e45 PyRosetta, preliminary PR to add Python-3.13 support ---------------- Merge commit message: trigger clean build

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branch: rosetta:commits 「№20544」
Commited by: Sergey Lyskov
GitHub Pull Request link: 「№187」
Merge: 「ba06f1143」← 「e3ea63558」  code diff
Scheduled at: 2024-10-03 22:48:36.076011
PyRosetta.notebook gcc-9.gcc.python37.PyRosetta.unit linux.clang.cxx11thread.serialization.python37.PyRosetta.unit linux.clang.python310.PyRosetta.unit linux.gcc.python312.PyRosetta.unit m1.clang.python38.PyRosetta.unit m1.clang.python39.PyRosetta.unit mac.clang.python310.PyRosetta.unit mac.clang.python38.PyRosetta.unit mac.clang.python39.PyRosetta.unit ubuntu-20.04.clang.python39.PyRosetta.unit ubuntu-22.04.clang.python39.PyRosetta.unit ubuntu-20.04.clang.python39.unit ubuntu-22.04.clang.python39.unit

Pull Request №187 RosettaCommons/rosetta/main ← lyskov/rosetta/pyrosetta Merge: ba06f11430f370c2f265737635ed98d9f0323f27←e3ea635588807bb40051d9cfea57d7460f2812b6 PyRosetta, preliminary PR to add Python-3.13 support ---------------- Merge commit message: update Pybind11 to v2.13

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branch: rosetta:commits 「№20543」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「ec708a4c4」← 「5ecca6bc8」  code diff
Scheduled at: 2024-10-03 13:30:22.247742
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
linux.clang.cxx11thread.serialization.python37.PyRosetta.unit mac.clang.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug graphics static beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: ec708a4c40449ea419c8fcac0d507440400bf75f←5ecca6bc8be14b3b8f4b3eeb05d32c295d2a4b09 Updated Ligand Motifs Code ---------------- Merge commit message: fixing variable usage

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branch: rosetta:commits 「№20542」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「ec708a4c4」← 「ad8af88bd」  code diff
Scheduled at: 2024-10-03 13:18:41.716509
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
linux.clang.cxx11thread.serialization.python37.PyRosetta.unit mac.clang.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug graphics static beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: ec708a4c40449ea419c8fcac0d507440400bf75f←ad8af88bd678f8ea38e39f793971649a517065be Updated Ligand Motifs Code ---------------- Merge commit message: fixing syntax

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branch: rosetta:commits 「№20541」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「ec708a4c4」← 「874b90430」  code diff
Scheduled at: 2024-10-03 13:09:03.420717
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
linux.clang.cxx11thread.serialization.python37.PyRosetta.unit mac.clang.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug graphics static beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: ec708a4c40449ea419c8fcac0d507440400bf75f←874b904307da9da0ebf8c265043a26060b1f8a8e Updated Ligand Motifs Code ---------------- Merge commit message: moving hash_motif_library_into_map() and motif_atoms typedef to motif_utils and out of LDS, as this functionality is likely better to make accessible beyond LDS

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branch: rosetta:commits 「№20540」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「ec708a4c4」← 「ad64deea3」  code diff
Scheduled at: 2024-09-25 18:39:05.049159
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
linux.clang.cxx11thread.serialization.python37.PyRosetta.unit mac.clang.python310.PyRosetta.unit mac.clang.python38.PyRosetta.unit mac.clang.python39.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug graphics static beautification ubuntu.clang.code_quality.cppcheck ubuntu.gcc.code_quality.cppcheck code_quality.merge_size serialization linux.clang.code_quality.submodule_regression linux.gcc.code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: ec708a4c40449ea419c8fcac0d507440400bf75f←ad64deea3f0a1906a43439a217bc6468e77856ad Updated Ligand Motifs Code ---------------- Merge commit message: Merge branch 'updated_ligand_discovery_search_code_ag_may_2024' of https://github.com/RosettaCommons/rosetta into updated_ligand_discovery_search_code_ag_may_2024

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Test: ubuntu.gcc.code_quality.merge_size

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Test: linux.clang.tensorflow.integration.tensorflow

Failed sub-tests (click for more details):
Test: linux.gcc.cxx11thread.integration.thread

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Test: torch.clang.torch.python39.integration.torch

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Test: mac.clang.python39.integration

Failed sub-tests (click for more details):
include_cc_check ligand_motif_discovery
Test: linux.clang.performance

Failed sub-tests (click for more details):
Test: linux.clang.profile

Failed sub-tests (click for more details):
Test: linux.clang.score

Failed sub-tests (click for more details):
Test: linux.gcc.score

Failed sub-tests (click for more details):
Test: mac.clang.score

Failed sub-tests (click for more details):


branch: rosetta:commits 「№20539」
Commited by: Ari Benjamin Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「ec708a4c4」← 「cf6ac522d」  code diff
Scheduled at: 2024-09-25 18:08:18.503810
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
linux.clang.cxx11thread.serialization.python37.PyRosetta.unit mac.clang.python310.PyRosetta.unit mac.clang.python38.PyRosetta.unit mac.clang.python39.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug graphics static beautification ubuntu.clang.code_quality.cppcheck ubuntu.gcc.code_quality.cppcheck code_quality.merge_size serialization linux.clang.code_quality.submodule_regression linux.gcc.code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: ec708a4c40449ea419c8fcac0d507440400bf75f←cf6ac522d4c777a2443d44ed34f12cbd4f7894c1 Updated Ligand Motifs Code ---------------- Merge commit message: beautifying the lds app, which I guess just wasn't mentioned in a previous call of beautification test...

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Test: linux.clang.build.header

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Test: ubuntu.gcc.code_quality.merge_size

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Test: linux.clang.performance

Failed sub-tests (click for more details):
Test: linux.clang.score

Failed sub-tests (click for more details):
Test: linux.gcc.score

Failed sub-tests (click for more details):


branch: rosetta:commits 「№20538」
Commited by: Ari Benjamin Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「ec708a4c4」← 「d6467d622」  code diff
Scheduled at: 2024-09-25 17:42:06.095367
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
linux.clang.cxx11thread.serialization.python37.PyRosetta.unit mac.clang.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug graphics static beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: ec708a4c40449ea419c8fcac0d507440400bf75f←d6467d62263e5a3bbc953a1c0045607880ae9960 Updated Ligand Motifs Code ---------------- Merge commit message: ran beautifier on these scripts

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Test: linux.clang.build.header

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Test: linux.gcc.code_quality.beautification

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Test: linux.clang.performance

Failed sub-tests (click for more details):
Test: linux.clang.score

Failed sub-tests (click for more details):


branch: rosetta:commits 「№20537」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「ec708a4c4」← 「81430b42b」  code diff
Scheduled at: 2024-09-25 17:25:01.334748
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
linux.clang.cxx11thread.serialization.python37.PyRosetta.unit mac.clang.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug beautification code_quality.beautify code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: ec708a4c40449ea419c8fcac0d507440400bf75f←81430b42b43970dfc764d6993990c4ace074db11 Updated Ligand Motifs Code ---------------- Merge commit message: doing some cleaning

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Test: linux.gcc.code_quality.beautify

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branch: rosetta:commits 「№20536」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「ec708a4c4」← 「3d3e2946e」  code diff
Scheduled at: 2024-09-25 17:22:58.251269
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
linux.clang.cxx11thread.serialization.python37.PyRosetta.unit mac.clang.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: ec708a4c40449ea419c8fcac0d507440400bf75f←3d3e2946e6e1e3f1bf866e3a4f2167e3fe83395b Updated Ligand Motifs Code ---------------- Merge commit message: cleaning the code that resets working_pose_ after either succeeding or failing to produce a good placement (occurs after high_res_dock, which modifies the residues in the pose and we do not want that to stay between placements)

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Test: linux.clang.build.header

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