Pushed Revisions

branch: RFdiffusion:commits 「№64」
Commited by: woodsh17
GitHub Pull Request link: 「№410」
Merge: 「e22092420」← 「681874e6e」 code diff
Scheduled at: 2025-10-22 16:23:38.705608

Pull Request №410 RosettaCommons/RFdiffusion/main ← RosettaCommons/RFdiffusion/fix_test_diffusion Merge: e22092420281c644b928e64d490044dfca4f9175←681874e6ea19e763a5ccb35d1a434c9b3f6d8179 Fix workflow tests that are failing ---------------- Merge commit message: Reduce length for design_tetrahedral_oligos to 600 to reduce run time

branch: RFdiffusion:commits 「№63」
Commited by: woodsh17
GitHub Pull Request link: 「№410」
Merge: 「e22092420」← 「4d870c07d」 code diff
Scheduled at: 2025-10-22 11:12:16.423251

Pull Request №410 RosettaCommons/RFdiffusion/main ← RosettaCommons/RFdiffusion/fix_test_diffusion Merge: e22092420281c644b928e64d490044dfca4f9175←4d870c07da5e645393ee85a557b41e799d8b6371 Fix workflow tests that are failing ---------------- Merge commit message: In setUpClass check that directory doesn't already exists, so tests do not fail before running examples

branch: RFdiffusion:commits 「№62」
Commited by: woodsh17
GitHub Pull Request link: 「№410」
Merge: 「e22092420」← 「dc1867dad」 code diff
Scheduled at: 2025-10-21 17:34:29.833256

Pull Request №410 RosettaCommons/RFdiffusion/main ← RosettaCommons/RFdiffusion/fix_test_diffusion Merge: e22092420281c644b928e64d490044dfca4f9175←dc1867dadf5f9ac6cb8b97e647eee67f0b6f8d23 Fix workflow tests that are failing ---------------- Merge commit message: Edit main.yml so workflow runs

branch: RFdiffusion:commits 「№61」
Commited by: woodsh17
GitHub Pull Request link: 「№410」
Merge: 「e22092420」← 「56feb3bb4」 code diff
Scheduled at: 2025-10-21 11:12:13.656070

Pull Request №410 RosettaCommons/RFdiffusion/main ← RosettaCommons/RFdiffusion/fix_test_diffusion Merge: e22092420281c644b928e64d490044dfca4f9175←56feb3bb4ab497e656ba185579aed06e5c32647a Fix workflow tests that are failing ---------------- Merge commit message: Remove set pipefail

branch: RFdiffusion:commits 「№60」
Commited by: woodsh17
GitHub Pull Request link: 「№410」
Merge: 「e22092420」← 「a570b2b8b」 code diff
Scheduled at: 2025-10-21 11:02:36.773725

Pull Request №410 RosettaCommons/RFdiffusion/main ← RosettaCommons/RFdiffusion/fix_test_diffusion Merge: e22092420281c644b928e64d490044dfca4f9175←a570b2b8bdce98e979d875cde81d5f9ed0f3d225 Fix workflow tests that are failing ---------------- Merge commit message: Edit main.yml workflow so if an example fails, the test doesn't pass

branch: RFdiffusion:commits 「№59」
Commited by: woodsh17
GitHub Pull Request link: 「№410」
Merge: 「e22092420」← 「260692d6c」 code diff
Scheduled at: 2025-10-20 14:51:24.919391

Pull Request №410 RosettaCommons/RFdiffusion/main ← RosettaCommons/RFdiffusion/fix_test_diffusion Merge: e22092420281c644b928e64d490044dfca4f9175←260692d6c2ce4a565fd60cf636c825c3317cc123 Fix workflow tests that are failing ---------------- Merge commit message: Edits to test_diffusion to make change setUp to setUpClass to make this a class method so examples run only once

branch: RFdiffusion:commits 「№58」
Commited by: woodsh17
GitHub Pull Request link: 「№410」
Merge: 「e22092420」← 「17f315b2d」 code diff
Scheduled at: 2025-10-17 13:50:31.785019

Pull Request №410 RosettaCommons/RFdiffusion/main ← RosettaCommons/RFdiffusion/fix_test_diffusion Merge: e22092420281c644b928e64d490044dfca4f9175←17f315b2de6d84c0ac189164b2c8d5c52fe8ac46 Fix workflow tests that are failing ---------------- Merge commit message: Add index of chunk to test directory name

branch: RFdiffusion:commits 「№57」
Commited by: woodsh17
GitHub Pull Request link: 「№410」
Merge: 「e22092420」← 「a629d43e9」 code diff
Scheduled at: 2025-10-17 12:08:44.195813

Pull Request №410 RosettaCommons/RFdiffusion/main ← RosettaCommons/RFdiffusion/fix_test_diffusion Merge: e22092420281c644b928e64d490044dfca4f9175←a629d43e928409c1e27f5396b376f1bcaca9a3be Fix workflow tests that are failing ---------------- Merge commit message: Add step to cd into tests directory in main.yml

branch: RFdiffusion:commits 「№56」
Commited by: woodsh17
GitHub Pull Request link: 「№410」
Merge: 「e22092420」← 「6d0036b48」 code diff
Scheduled at: 2025-10-17 11:58:41.861471

Pull Request №410 RosettaCommons/RFdiffusion/main ← RosettaCommons/RFdiffusion/fix_test_diffusion Merge: e22092420281c644b928e64d490044dfca4f9175←6d0036b4809704b412012c194db8c694432da810 Fix workflow tests that are failing ---------------- Merge commit message: Fix typo in main.yml in test_diffusion options

branch: RFdiffusion:commits 「№55」
Commited by: woodsh17
GitHub Pull Request link: 「№410」
Merge: 「e22092420」← 「a9b748be3」 code diff
Scheduled at: 2025-10-14 12:48:43.177110

Pull Request №410 RosettaCommons/RFdiffusion/main ← RosettaCommons/RFdiffusion/fix_test_diffusion Merge: e22092420281c644b928e64d490044dfca4f9175←a9b748be37b34792043b195e955dec5270da8b77 Fix workflow tests that are failing ---------------- Merge commit message: Add print statement to list failed examples

branch: RFdiffusion:commits 「№54」
Commited by: woodsh17
GitHub Pull Request link: 「№410」
Merge: 「e22092420」← 「778f8d4b2」 code diff
Scheduled at: 2025-10-10 16:35:31.278221

Pull Request №410 RosettaCommons/RFdiffusion/main ← RosettaCommons/RFdiffusion/fix_test_diffusion Merge: e22092420281c644b928e64d490044dfca4f9175←778f8d4b28f7cfd6e54c61c76ffd47de6d38bd2a Fix workflow tests that are failing ---------------- Merge commit message: Fix input_pdb path in design_macrocyclic_binder and fix incorrect call to res in test_diffusion.py

branch: RFdiffusion:commits 「№53」
Commited by: woodsh17
GitHub Pull Request link: 「№410」
Merge: 「e22092420」← 「f43a81d59」 code diff
Scheduled at: 2025-10-10 15:00:17.064384

Pull Request №410 RosettaCommons/RFdiffusion/main ← RosettaCommons/RFdiffusion/fix_test_diffusion Merge: e22092420281c644b928e64d490044dfca4f9175←f43a81d59d6999759667db97269d0fea3693c277 Fix workflow tests that are failing ---------------- Merge commit message: Changing number of designs for examples from 10 to 2 to speed up tests

branch: RFdiffusion:commits 「№52」
Commited by: woodsh17
GitHub Pull Request link: 「№410」
Merge: 「e22092420」← 「a45c3f9da」 code diff
Scheduled at: 2025-10-10 14:50:49.886066

Pull Request №410 RosettaCommons/RFdiffusion/main ← RosettaCommons/RFdiffusion/fix_test_diffusion Merge: e22092420281c644b928e64d490044dfca4f9175←a45c3f9da7cfd5d3733d33d142ed8e980a7cf6b3 Fix workflow tests that are failing ---------------- Merge commit message: Fail tests when example scripts exit non-zero

branch: RFdiffusion:commits 「№51」
Commited by: woodsh17
GitHub Pull Request link: 「№410」
Merge: 「e22092420」← 「2d157302d」 code diff
Scheduled at: 2025-10-10 10:49:08.022276

Pull Request №410 RosettaCommons/RFdiffusion/main ← RosettaCommons/RFdiffusion/fix_test_diffusion Merge: e22092420281c644b928e64d490044dfca4f9175←2d157302d341c3d8b8d8ef2e02a955d419f51e55 Fix workflow tests that are failing ---------------- Merge commit message: Adjusting command format for design_macrocyclic_binder.sh and design_macrocyclic_monomer.sh

branch: RFdiffusion:commits 「№50」
Commited by: woodsh17
GitHub Pull Request link: 「№409」
Merge: 「e22092420」← 「caa732e2e」 code diff
Scheduled at: 2025-09-29 14:38:28.405945

Pull Request №409 RosettaCommons/RFdiffusion/main ← RosettaCommons/RFdiffusion/idx_pdb_scaffoldedsampler Merge: e22092420281c644b928e64d490044dfca4f9175←caa732e2e181853acf333082136e1eb83a18cb6e Fix: Conditionally pass idx_pdb to writepdb to avoid AttributeError with SelfConditioning/ScaffoldedSampler ---------------- Merge commit message: Add conditional statement for including sampler.idx_pdb for writepdb since ScaffoldedSampler.sample_init() doesn't set idx_pdb.

branch: RFdiffusion:commits 「№49」
Commited by: Ruizhi Peng
GitHub Pull Request link: 「№407」
Merge: 「e22092420」← 「5636b67f1」 code diff
Scheduled at: 2025-09-28 00:26:51.733086

Pull Request №407 RosettaCommons/RFdiffusion/main ← RuizhiPeng/RFdiffusion/main Merge: e22092420281c644b928e64d490044dfca4f9175←5636b67f1418525067be733398157f2815a14251 Fix cyclic_reses error when doing scaffoldguided.scaffoldguided=True ---------------- Merge commit message: Delete rfdiffusion/inference/inference directory wrong upload

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