Pull Request №658 RosettaCommons/rosetta/main ← klimaj/rosetta/cache_efficiency Merge: 068bd85322153b1ddc5a354f8cf0633a5631e9fa←66b0d28dfe545a6914a0091669329be4b7fd8bc4 Improving `Pose.cache` dictionary getter and setter performance ---------------- Merge commit message: Initial commit

• Summary
• ubuntu-20.04.clang.cxx11thread.serialization.python310.PyRosetta.unit 「5」
• ubuntu-20.04.clang.cxx11thread.serialization.python311.PyRosetta.unit 「5」
• ubuntu-20.04.clang.cxx11thread.serialization.python312.PyRosetta.unit 「5」
• ubuntu-20.04.clang.cxx11thread.serialization.python313.PyRosetta.unit 「5」
• ubuntu-20.04.clang.cxx11thread.serialization.python314.PyRosetta.unit 「5」
• ubuntu-20.04.clang.cxx11thread.serialization.python39.PyRosetta.unit 「5」
• ubuntu-20.04.gcc.cxx11thread.serialization.python310.PyRosetta.unit 「5」
• ubuntu-20.04.gcc.cxx11thread.serialization.python311.PyRosetta.unit 「5」
• ubuntu-20.04.gcc.cxx11thread.serialization.python312.PyRosetta.unit 「5」
• ubuntu-20.04.gcc.cxx11thread.serialization.python313.PyRosetta.unit 「5」
• ubuntu-20.04.gcc.cxx11thread.serialization.python314.PyRosetta.unit 「5」
• ubuntu-20.04.gcc.cxx11thread.serialization.python39.PyRosetta.unit 「5」

Pull Request №99 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/bcov/hbond_graph_pyrosetta Merge: 068bd85322153b1ddc5a354f8cf0633a5631e9fa←ddf7f266d6f8416a677818c4fc4127f1fd59e49a Made hbond graph pyrosetta compatible ---------------- Merge commit message: Merge remote-tracking branch 'origin/main' into bcov/hbond_graph_pyrosetta

• Summary
• ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit 「2」
• integration.mpi 「2」
• integration.tensorflow 「1」

Pull Request №627 RosettaCommons/rosetta/main ← jderiz/rosetta/jderiz/feature/add_interface_AB_HL_option_to_cartesian_ddg Merge: 597b55d6600c3939574ffee30a4469b26c3337bd←8867af51577392850881227fcc4305c68a368114 Jderiz/feature/add Docking Protocol-like interface definition option to cartesian ddg ---------------- Merge commit message: Merge branch 'RosettaCommons:main' into jderiz/feature/add_interface_AB_HL_option_to_cartesian_ddg

• Summary
• integration.mpi 「2」
• integration.release_debug 「0」
• integration.tensorflow 「1」
• integration.thread 「0」
• integration.torch
• integration 「0」
• performance 「0」
• profile 「0」
• linux.clang.score 「0」
• linux.gcc.score 「0」
• mac.clang.score 「0」
• scripts.pyrosetta

Pull Request №657 RosettaCommons/rosetta/main ← klimaj/rosetta/docstrings2 Merge: ac1c89d42bb0c2942c3a91382a8ec42d65e96275←d37c3d550cf404034d90b65ea58c557655395d75 Clean up PyRosetta Sphinx documentation ---------------- Merge commit message: Initial commit

• Summary

Pull Request №655 RosettaCommons/rosetta/main ← klimaj/rosetta/security_patch Merge: ea526b88894f2552c8fa2e3efd3603716034cd6a←87d8e415bb38ef536a1765ec0f37d2c81af29baf Quick update: change which HKDF function is used by HMAC-SHA256 verification machinery in PyRosettaCluster ---------------- Merge commit message: git pull origin main

• Summary

Pull Request №655 RosettaCommons/rosetta/main ← klimaj/rosetta/security_patch Merge: b166af21f0776040bd54a021d8c7fd264cd99bfa←b493fcbb63beffbeeddbe3ba6dd25b90a61ba5c4 Quick update: change which HKDF function is used by HMAC-SHA256 verification machinery in PyRosettaCluster ---------------- Merge commit message: Update version

• Summary

Pull Request №648 RosettaCommons/rosetta/main ← klimaj/rosetta/unittests3 Merge: b166af21f0776040bd54a021d8c7fd264cd99bfa←bb803ff3a4ce2ffd2662d6bdea80ef847511e387 Split T900_distributed.py module into separate sub-tests ---------------- Merge commit message: Update warning/error messages in relevant unit tests from merged PR #646

• Summary

Pull Request №648 RosettaCommons/rosetta/main ← klimaj/rosetta/unittests3 Merge: 47f3ee8eecf722cf09d8adbc44898160976e9f8a←7fabb1c946e94cc85ea21cdb3880a6124f321952 Testing PR #636 variant: non-streaming grandchild processes (with subprocess.getstatusoutput) with os.fork model in self-test.py ---------------- Merge commit message: Revert "Disable T914 tests" This reverts commit 0cabcf55f3c6e19454444800a9f1779439a2cac1.

• Summary

Pull Request №648 RosettaCommons/rosetta/main ← klimaj/rosetta/unittests3 Merge: 47f3ee8eecf722cf09d8adbc44898160976e9f8a←0cabcf55f3c6e19454444800a9f1779439a2cac1 Testing PR #636 variant: non-streaming grandchild processes (with subprocess.getstatusoutput) with os.fork model in self-test.py ---------------- Merge commit message: Disable T914 tests

• Summary

Pull Request №648 RosettaCommons/rosetta/main ← klimaj/rosetta/unittests3 Merge: 47f3ee8eecf722cf09d8adbc44898160976e9f8a←97f39364706fd44ae5e3b5deb6091b122887cc2b Testing PR #636 variant: non-streaming grandchild processes (with subprocess.getstatusoutput) with os.fork model in self-test.py ---------------- Merge commit message: Break file descriptor inheritance chain for stdout with stdout=subprocess.PIPE

• Summary
• ubuntu-20.04.clang.cxx11thread.serialization.python314.PyRosetta.unit
• ubuntu-20.04.gcc.cxx11thread.serialization.python39.PyRosetta.unit
• ubuntu-22.04.clang.cxx11thread.serialization.python314.PyRosetta.unit

Pull Request №648 RosettaCommons/rosetta/main ← klimaj/rosetta/unittests3 Merge: 47f3ee8eecf722cf09d8adbc44898160976e9f8a←f1cb348c42fdecdcddd42554333220ccfe8cd19d Testing PR #636 variant: non-streaming grandchild processes (with subprocess.getstatusoutput) with os.fork model in self-test.py ---------------- Merge commit message: Set verbose=False

• Summary
• ubuntu-20.04.clang.cxx11thread.serialization.python310.PyRosetta.unit
• ubuntu-20.04.gcc.cxx11thread.serialization.python310.PyRosetta.unit
• ubuntu-20.04.gcc.cxx11thread.serialization.python313.PyRosetta.unit
• ubuntu-22.04.clang.cxx11thread.serialization.python313.PyRosetta.unit
• ubuntu-24.04.clang.cxx11thread.serialization.python314.PyRosetta.unit

Pull Request №648 RosettaCommons/rosetta/main ← klimaj/rosetta/unittests3 Merge: 47f3ee8eecf722cf09d8adbc44898160976e9f8a←2669509485a064e62199872a0f48ef64d250fb76 Testing PR #636 variant: non-streaming grandchild processes (with subprocess.getstatusoutput) with os.fork model in self-test.py ---------------- Merge commit message: Clean up help message

• Summary
• ubuntu-20.04.gcc.cxx11thread.serialization.python39.PyRosetta.unit
• ubuntu-22.04.gcc.cxx11thread.serialization.python312.PyRosetta.unit
• ubuntu-24.04.gcc.cxx11thread.serialization.python39.PyRosetta.unit

Pull Request №649 RosettaCommons/rosetta/main ← klimaj/rosetta/unittests4 Merge: 47f3ee8eecf722cf09d8adbc44898160976e9f8a←b2029631fe036d1267b428782ca832cd308120c1 Testing PR #636 variant: streaming grandchild processes with os.fork model in self-test.py ---------------- Merge commit message: Testing self-test.py -j1 to bypass os.fork model

• Summary

Pull Request №648 RosettaCommons/rosetta/main ← klimaj/rosetta/unittests3 Merge: 47f3ee8eecf722cf09d8adbc44898160976e9f8a←2f6cdb5b4d1f599c3529cb07fa3d923fec78181b Testing PR #636 variant: non-streaming grandchild processes (with subprocess.getstatusoutput) with os.fork model in self-test.py ---------------- Merge commit message: Testing self-test.py -j1 to bypass os.fork model

• Summary

Pull Request №647 RosettaCommons/rosetta/main ← klimaj/rosetta/unittests2 Merge: 47f3ee8eecf722cf09d8adbc44898160976e9f8a←5a4cd479187cf87ceb3808c405b5e583e6557ec7 Testing PR #636 variant: non-streaming grandchild processes with os.fork model in self-test.py ---------------- Merge commit message: Testing self-test.py -j1 to bypass os.fork model

• Summary

Pull Request №653 RosettaCommons/rosetta/main ← klimaj/rosetta/unittests6 Merge: 47f3ee8eecf722cf09d8adbc44898160976e9f8a←cd74e327360c1fd86eaffaaad2bbe248dfd5d464 Testing PR #636 variant: non-streaming grandchild processes (with subprocess.getstatusoutput) run serially with os.fork model in self-test.py, and subprocess.run in T917 ---------------- Merge commit message: Reverting run_subprocess function in T917 to a subprocess.run call

• Summary
• ubuntu-22.04.gcc.cxx11thread.serialization.python310.PyRosetta.unit
• ubuntu-22.04.gcc.cxx11thread.serialization.python39.PyRosetta.unit
• ubuntu-24.04.gcc.cxx11thread.serialization.python313.PyRosetta.unit

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