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branch: rosetta:commits 「№20735」
Commited by: Sergey Lyskov
GitHub Pull Request link: 「№393」
Merge: 「85949a986」← 「83ea16e4f」  code diff
Scheduled at: 2025-04-11 20:52:01.165244
m1.clang.python311.PyRosetta.unit mac.clang.python311.PyRosetta.unit ubuntu-20.04.clang.cxx11thread.serialization.python311.PyRosetta.unit

Pull Request №393 RosettaCommons/rosetta/main ← lyskov/rosetta/main Merge: 85949a986e33c0ceb97e32afdb09c083e6b7352f←83ea16e4fc16d24a25dc812d63774561979b9c9f update Python-3.11 to 3.11.12 ---------------- Merge commit message: update Python-3.11 to 3.11.12

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branch: rosetta:commits 「№20734」
Commited by: Paul Eisenhuth
GitHub Pull Request link: 「№392」
Merge: 「85949a986」← 「710583166」  code diff
Scheduled at: 2025-04-11 10:18:28.871267
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
PyRosetta.notebook gcc-9.gcc.python37.PyRosetta.unit m1.clang.python38.PyRosetta.unit m1.clang.python39.PyRosetta.unit mac.clang.python310.PyRosetta.unit mac.clang.python38.PyRosetta.unit mac.clang.python39.PyRosetta.unit ubuntu-20.04.clang.python39.PyRosetta.unit ubuntu-22.04.clang.python39.PyRosetta.unit ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit ubuntu.clang.python310.PyRosetta.unit ubuntu.gcc.python312.PyRosetta.unit linux.clang.tensorflow.build.debug mpi mpi.serialization build.header build.levels build.ninja_debug graphics static beautification ubuntu.clang.code_quality.cppcheck ubuntu.gcc.code_quality.cppcheck code_quality.merge_size serialization linux.clang.code_quality.submodule_regression linux.gcc.code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score linux.clang.python312.scripts.pyrosetta ubuntu.clang.python312.scripts.pyrosetta linux.clang.scripts.rosetta.parse ubuntu.clang.scripts.rosetta.parse linux.clang.scripts.rosetta.validate ubuntu.clang.scripts.rosetta.validate linux.clang.scripts.rosetta.verify ubuntu.clang.scripts.rosetta.verify ubuntu-20.04.clang.python39.unit ubuntu-22.04.clang.python39.unit util.apps windows.build.debug windows.build.release

Pull Request №392 RosettaCommons/rosetta/main ← Hackefleisch/rosetta/revold Merge: 85949a986e33c0ceb97e32afdb09c083e6b7352f←71058316655c54ea36086410b58d40a5991d6b84 Revold ---------------- Merge commit message: Merge branch 'main' into revold

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Test: ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit

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Test: ubuntu.gcc.code_quality.merge_size

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Test: linux.gcc.mpi.serialization.integration.mpi

Failed sub-tests (click for more details):
replica_docking
Test: linux.clang.integration.release_debug_no_symbols

Failed sub-tests (click for more details):
features
Test: linux.clang.python312.scripts.pyrosetta

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branch: rosetta:commits 「№20733」
Commited by: Sergey Lyskov
GitHub Pull Request link: 「№388」
Merge: 「695b0f21a」← 「06a392528」  code diff
Scheduled at: 2025-04-08 14:15:14.107897
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
mac.clang.python38.PyRosetta.unit ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit gcc-9.gcc.build.debug mpi mpi.serialization build.header build.levels build.ninja_debug beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.python38.release.PyRosetta.MinSizeRel ubuntu.clang.python38.release.PyRosetta.MinSizeRel release.PyRosetta.conda.Release release.PyRosetta.documentation release.binary linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №388 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/fix-mac-release Merge: 695b0f21aed8ace84a900449ce857ab632f8e4d1←06a392528feec637f0399b183e3aaae16d127216 fix Mac RC release package ---------------- Merge commit message: use core2 instruction set on Mac when compiling on x86

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Test: linux.gcc.mpi.serialization.integration.mpi

Failed sub-tests (click for more details):
replica_docking
Test: linux.clang.tensorflow.integration.tensorflow

Failed sub-tests (click for more details):
tensorflow_manager
Test: mac.clang.python39.integration

Failed sub-tests (click for more details):
revold
Test: linux.clang.python38.release.PyRosetta.MinSizeRel

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branch: rosetta:commits 「№20732」
Commited by: Ari Benjamin Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「74f819c4d」← 「1298fde85」  code diff
Scheduled at: 2025-04-04 14:45:11.238915
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
mac.clang.python310.PyRosetta.unit mac.clang.python38.PyRosetta.unit mac.clang.python39.PyRosetta.unit ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug graphics static beautification ubuntu.clang.code_quality.cppcheck ubuntu.gcc.code_quality.cppcheck code_quality.merge_size serialization linux.clang.code_quality.submodule_regression linux.gcc.code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score linux.clang.python312.scripts.pyrosetta ubuntu.clang.python312.scripts.pyrosetta linux.clang.scripts.rosetta.parse ubuntu.clang.scripts.rosetta.parse linux.clang.scripts.rosetta.validate ubuntu.clang.scripts.rosetta.validate linux.clang.scripts.rosetta.verify ubuntu.clang.scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: 74f819c4dd58142810833fb8e63211f2974ee342←1298fde858856152300a5d4b072b28448924a54c Updated Ligand Motifs Code ---------------- Merge commit message: ran cleaner on the proteingrid script for beautification

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Test: ubuntu.gcc.code_quality.merge_size

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Test: linux.clang.python312.scripts.pyrosetta

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branch: rosetta:commits 「№20731」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「74f819c4d」← 「736453477」  code diff
Scheduled at: 2025-04-04 14:43:15.567354
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
mac.clang.python38.PyRosetta.unit ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: 74f819c4dd58142810833fb8e63211f2974ee342←736453477c64c0a95b520818e101d7b769207c41 Updated Ligand Motifs Code ---------------- Merge commit message: adding additional debug statements, since I have started to pinpoint where the segfault is

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branch: rosetta:commits 「№20730」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「74f819c4d」← 「26269c5aa」  code diff
Scheduled at: 2025-04-04 13:04:37.655591
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
mac.clang.python38.PyRosetta.unit ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: 74f819c4dd58142810833fb8e63211f2974ee342←26269c5aa429198f70918f9b09511d842b8767cb Updated Ligand Motifs Code ---------------- Merge commit message: adding breakpoints to try to catch where the wrap function breaks in the release integration test

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Test: ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit

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Test: linux.gcc.code_quality.beautification

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Test: ubuntu.gcc.code_quality.merge_size

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branch: rosetta:commits 「№20729」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「74f819c4d」← 「f974b9c9e」  code diff
Scheduled at: 2025-04-04 11:34:05.985906
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
mac.clang.python38.PyRosetta.unit ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug graphics static beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: 74f819c4dd58142810833fb8e63211f2974ee342←f974b9c9eb50496811cd1b1c522e2fa0110f4ae7 Updated Ligand Motifs Code ---------------- Merge commit message: adding additional guardrails to the coordinate determination in wrap function

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Test: linux.gcc.code_quality.beautification

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Test: ubuntu.gcc.code_quality.merge_size

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branch: rosetta:commits 「№20728」
Commited by: Ginsparg
GitHub commit link: 「eb335bbef6d6c316」
Difference from previous tested commit:  code diff
Commit date: 2025-04-03 21:18:52
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
build.ninja_debug graphics static beautification integration.mpi integration.release_debug integration linux.clang.score linux.gcc.score mac.clang.score windows.build.debug windows.build.release

uploading these likely better cleaned files so that we pass beautification this time

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branch: rosetta:commits 「№20727」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「74f819c4d」← 「eb335bbef」  code diff
Scheduled at: 2025-04-03 17:22:13.560613
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
mac.clang.python38.PyRosetta.unit ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug graphics static beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: 74f819c4dd58142810833fb8e63211f2974ee342←eb335bbef6d6c316ce39cc03c8dca6ea8f2c8ac3 Updated Ligand Motifs Code ---------------- Merge commit message: uploading these likely better cleaned files so that we pass beautification this time

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Test: ubuntu.gcc.code_quality.merge_size

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branch: rosetta:commits 「№20726」
Commited by: Ginsparg
GitHub commit link: 「747ff007b21726e1」
Difference from previous tested commit:  code diff
Commit date: 2025-04-03 20:12:52
code_quality.beautify

ran cleaner on files

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branch: rosetta:commits 「№20725」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「74f819c4d」← 「747ff007b」  code diff
Scheduled at: 2025-04-03 16:15:13.837888
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
mac.clang.python38.PyRosetta.unit ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug graphics static beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: 74f819c4dd58142810833fb8e63211f2974ee342←747ff007b21726e145f002eb7f2bdae48cac020f Updated Ligand Motifs Code ---------------- Merge commit message: ran cleaner on files

Rosetta Benchmark 2 weeks
Tests for this revision was automatically canceled because newer set of tests for pull-request №59 was submitted!
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Test: ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit

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Test: linux.gcc.code_quality.beautification

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Test: ubuntu.gcc.code_quality.merge_size

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branch: rosetta:commits 「№20724」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「74f819c4d」← 「fb596fa26」  code diff
Scheduled at: 2025-04-03 16:06:45.831535
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
mac.clang.python38.PyRosetta.unit ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: 74f819c4dd58142810833fb8e63211f2974ee342←fb596fa26ec004e69a801ce966cab099af497678 Updated Ligand Motifs Code ---------------- Merge commit message: adjusting integration test flag file to drop the differential ratio cutoff from 0.15 to 0.10 to account for the bug that was fixed with calculation of sub area volume. Since the sub areas are larger, the placed ligand occupies less, and so the differential should be lower to still catch the same ligand placements

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branch: rosetta:commits 「№20723」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「74f819c4d」← 「2aa9cf948」  code diff
Scheduled at: 2025-04-03 15:46:34.836606
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
mac.clang.python38.PyRosetta.unit ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: 74f819c4dd58142810833fb8e63211f2974ee342←2aa9cf948d0692046753bd9c650ec3c30bf68332 Updated Ligand Motifs Code ---------------- Merge commit message: attempting revert from commit before I broke getting the expected outputs

Rosetta Benchmark 2 weeks
Tests for this revision was automatically canceled because newer set of tests for pull-request №59 was submitted!
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branch: rosetta:commits 「№20722」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「74f819c4d」← 「ddf4b627a」  code diff
Scheduled at: 2025-04-03 15:38:54.273854
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
mac.clang.python38.PyRosetta.unit ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: 74f819c4dd58142810833fb8e63211f2974ee342←ddf4b627a968b986a5dfaa7130d23a329a03d853 Updated Ligand Motifs Code ---------------- Merge commit message: attemptign to revert, because I lost an expected placement

Rosetta Benchmark 2 weeks
Tests for this revision was automatically canceled because newer set of tests for pull-request №59 was submitted!
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branch: rosetta:commits 「№20721」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「74f819c4d」← 「cdad13c16」  code diff
Scheduled at: 2025-04-03 15:20:37.653299
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
mac.clang.python38.PyRosetta.unit ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: 74f819c4dd58142810833fb8e63211f2974ee342←cdad13c1633e8d33408a1d4c04664aa4af067d57 Updated Ligand Motifs Code ---------------- Merge commit message: removing debug cout statements to prepare for final review, now that this is likely working

Rosetta Benchmark 2 weeks
Tests for this revision was automatically canceled because newer set of tests for pull-request №59 was submitted!
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branch: rosetta:commits 「№20720」
Commited by: Ginsparg
GitHub Pull Request link: 「№59」
Merge: 「74f819c4d」← 「8f912b9bf」  code diff
Scheduled at: 2025-04-03 15:03:01.610776
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
mac.clang.python38.PyRosetta.unit ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №59 RosettaCommons/rosetta/main ← RosettaCommons/rosetta/updated_ligand_discovery_search_code_ag_may_2024 Merge: 74f819c4dd58142810833fb8e63211f2974ee342←8f912b9bf916a4ffd6a4c75164b6ef7723612695 Updated Ligand Motifs Code ---------------- Merge commit message: temporarily removing clash statement, it may be broken

Rosetta Benchmark 2 weeks
Tests for this revision was automatically canceled because newer set of tests for pull-request №59 was submitted!
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