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branch: rosetta:commits 「№20846」
Commited by: Jason C. Klima
GitHub Pull Request link: 「№430」
Merge: 「931f7d904」← 「d19679eda」 code diff
Scheduled at: 2025-06-30 20:20:34.436469

Pull Request №430 RosettaCommons/rosetta/main ← klimaj/rosetta/scores Merge: 931f7d9046b1ae0a0b62c826dea7edc4a33f52ab←d19679edaa0974ef2ff7a3e1b761029e70910b3f Enable Pose.scores dictionary to store arbitrary python objects ---------------- Merge commit message: Minor tweaks to docstrings

Summary

...

branch: rosetta:commits 「№20845」
Commited by: Rocco Moretti
GitHub Pull Request link: 「№450」
Merge: 「a0cefad01」← 「c69897378」 code diff
Scheduled at: 2025-06-30 18:45:27.447694

	linux.clang	linux.gcc	linux.srlz	mac.clang
debug
release
unit

Pull Request №450 RosettaCommons/rosetta/main ← roccomoretti/rosetta/gemmi Merge: a0cefad01b3959ae8327a8931f5ad8c3fad27ea9←c69897378123c64ad142606a91c765b9dbec9221 Update mmCIF parsing ---------------- Merge commit message: Fix join() overload issues.

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Test: linux.clang.integration.release_debug_no_symbols

Failed sub-tests (click for more details):
InterfaceAnalyzer_ligand cyclization features jd2test_PDBin_mmCIFout jd2test_PDBin_mmCIFout_extra_data_separate jd2test_mmCIFIO ligand_motif_identification mmtfIO_score_test pymol_cif restype_converter simple_grafting_movers simple_metrics_b_factor simple_metrics_per_residue

Test: mac.clang.python39.integration

Failed sub-tests (click for more details):
InterfaceAnalyzer_ligand jd2test_PDBin_mmCIFout jd2test_PDBin_mmCIFout_extra_data_separate jd2test_mmCIFIO ligand_motif_identification mmtfIO_score_test pymol_cif restype_converter simple_grafting_movers simple_metrics_b_factor simple_metrics_per_residue

Test: linux.clang.performance

Failed sub-tests (click for more details):
instantiate_modules_packer_palettes

Test: linux.clang.python312.scripts.pyrosetta

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branch: rosetta:commits 「№20844」
Commited by: Jason C. Klima
GitHub Pull Request link: 「№430」
Merge: 「931f7d904」← 「428e0fba6」 code diff
Scheduled at: 2025-06-30 14:54:09.577578

Pull Request №430 RosettaCommons/rosetta/main ← klimaj/rosetta/scores Merge: 931f7d9046b1ae0a0b62c826dea7edc4a33f52ab←428e0fba61dcb3526e236a90be4d3ed9aa557eec Enable Pose.scores dictionary to store arbitrary python objects ---------------- Merge commit message: Update docstrings

Summary

...

branch: rosetta:commits 「№20843」
Commited by: Jason C. Klima
GitHub Pull Request link: 「№430」
Merge: 「931f7d904」← 「5e6155426」 code diff
Scheduled at: 2025-06-29 19:39:04.644944

Pull Request №430 RosettaCommons/rosetta/main ← klimaj/rosetta/scores Merge: 931f7d9046b1ae0a0b62c826dea7edc4a33f52ab←5e615542651935ed00101c77ac7bdbfa85526cc0 Enable Pose.scores dictionary to store arbitrary python objects ---------------- Merge commit message: Update docstrings

Summary

...

branch: rosetta:commits 「№20842」
Commited by: Jason C. Klima
GitHub Pull Request link: 「№430」
Merge: 「931f7d904」← 「d1c110fef」 code diff
Scheduled at: 2025-06-29 17:26:20.504935

Pull Request №430 RosettaCommons/rosetta/main ← klimaj/rosetta/scores Merge: 931f7d9046b1ae0a0b62c826dea7edc4a33f52ab←d1c110fefc7383ec4b19a3d31994586d623b0bcc Enable Pose.scores dictionary to store arbitrary python objects ---------------- Merge commit message: Update version

Summary

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branch: rosetta:commits 「№20841」
Commited by: Jason C. Klima
GitHub Pull Request link: 「№430」
Merge: 「a0cefad01」← 「9dab061af」 code diff
Scheduled at: 2025-06-29 16:07:57.746415

Pull Request №430 RosettaCommons/rosetta/main ← klimaj/rosetta/scores Merge: a0cefad01b3959ae8327a8931f5ad8c3fad27ea9←9dab061af371ab035172a8b5b3984b33f6b7de21 Enable Pose.scores dictionary to store arbitrary python objects ---------------- Merge commit message: Fix warning

Summary

...

branch: rosetta:commits 「№20840」
Commited by: Jason C. Klima
GitHub Pull Request link: 「№430」
Merge: 「a0cefad01」← 「6b75b061b」 code diff
Scheduled at: 2025-06-29 02:10:35.936046

Pull Request №430 RosettaCommons/rosetta/main ← klimaj/rosetta/scores Merge: a0cefad01b3959ae8327a8931f5ad8c3fad27ea9←6b75b061b2c134959218d64a3677787a7a54edbf Enable Pose.scores dictionary to store arbitrary python objects ---------------- Merge commit message: Add deprecation warning to pose.scores

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Test: ubuntu-20.04.clang.cxx11thread.serialization.python310.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.clang.cxx11thread.serialization.python311.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.clang.cxx11thread.serialization.python312.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.clang.cxx11thread.serialization.python313.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.clang.cxx11thread.serialization.python38.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.clang.cxx11thread.serialization.python39.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.gcc.cxx11thread.serialization.python310.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.gcc.cxx11thread.serialization.python311.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.gcc.cxx11thread.serialization.python312.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.gcc.cxx11thread.serialization.python313.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.gcc.cxx11thread.serialization.python38.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.gcc.cxx11thread.serialization.python39.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

branch: rosetta:commits 「№20839」
Commited by: Jason C. Klima
GitHub Pull Request link: 「№430」
Merge: 「a0cefad01」← 「4dac34001」 code diff
Scheduled at: 2025-06-28 18:59:21.773172

Pull Request №430 RosettaCommons/rosetta/main ← klimaj/rosetta/scores Merge: a0cefad01b3959ae8327a8931f5ad8c3fad27ea9←4dac340019d7c792e3d929a6393e75e5a43f627a Enable Pose.scores dictionary to store arbitrary python objects ---------------- Merge commit message: Change pose.scores to pose.cache

...

Test: ubuntu-20.04.clang.cxx11thread.serialization.python310.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.clang.cxx11thread.serialization.python311.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.clang.cxx11thread.serialization.python312.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.clang.cxx11thread.serialization.python313.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.clang.cxx11thread.serialization.python38.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.clang.cxx11thread.serialization.python39.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.gcc.cxx11thread.serialization.python310.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.gcc.cxx11thread.serialization.python311.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.gcc.cxx11thread.serialization.python312.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.gcc.cxx11thread.serialization.python313.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.gcc.cxx11thread.serialization.python38.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

Test: ubuntu-20.04.gcc.cxx11thread.serialization.python39.PyRosetta.unit

Failed sub-tests (click for more details):
T900_distributed

branch: rosetta:commits 「№20838」
Commited by: Jason C. Klima
GitHub Pull Request link: 「№430」
Merge: 「a0cefad01」← 「02e4bfab0」 code diff
Scheduled at: 2025-06-28 18:10:49.720897

Pull Request №430 RosettaCommons/rosetta/main ← klimaj/rosetta/scores Merge: a0cefad01b3959ae8327a8931f5ad8c3fad27ea9←02e4bfab07f78c89de2363f5c468c7e798de38f5 Enable Pose.scores dictionary to store arbitrary python objects ---------------- Merge commit message: Remove numpy dependency for non-serialization builds

...

Test: gcc-9.gcc.python37.PyRosetta.unit

Failed sub-tests (click for more details):
T300_PyJobDistributor

Test: mac.clang.python310.PyRosetta.unit

Failed sub-tests (click for more details):
T300_PyJobDistributor

Test: mac.clang.python311.PyRosetta.unit

Failed sub-tests (click for more details):
T300_PyJobDistributor

Test: mac.clang.python38.PyRosetta.unit

Failed sub-tests (click for more details):
T300_PyJobDistributor

Test: mac.clang.python39.PyRosetta.unit

Failed sub-tests (click for more details):
T300_PyJobDistributor

Test: ubuntu-20.04.clang.cxx11thread.serialization.python313.PyRosetta.unit

Failed sub-tests (click for more details):
T300_PyJobDistributor T900_distributed

Test: ubuntu-20.04.clang.python39.PyRosetta.unit

Failed sub-tests (click for more details):
T300_PyJobDistributor

Test: ubuntu.clang.python310.PyRosetta.unit

Failed sub-tests (click for more details):
T300_PyJobDistributor

Test: ubuntu.gcc.python312.PyRosetta.unit

Failed sub-tests (click for more details):
T300_PyJobDistributor

branch: rosetta:commits 「№20837」
Commited by: Jason C. Klima
GitHub Pull Request link: 「№430」
Merge: 「a0cefad01」← 「7b3dc3be1」 code diff
Scheduled at: 2025-06-28 17:44:23.387082

Pull Request №430 RosettaCommons/rosetta/main ← klimaj/rosetta/scores Merge: a0cefad01b3959ae8327a8931f5ad8c3fad27ea9←7b3dc3be1ede2445014ae187d32cc58a844890e1 Enable Pose.scores dictionary to store arbitrary python objects ---------------- Merge commit message: Add pose.cache unit tests

...

Test: gcc-9.gcc.python37.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: m1.clang.python38.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: mac.clang.python38.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: ubuntu-20.04.clang.cxx11thread.serialization.python313.PyRosetta.unit

Failed sub-tests (click for more details):
T300_PyJobDistributor T900_distributed

Test: ubuntu-20.04.clang.cxx11thread.serialization.python38.PyRosetta.unit

Failed sub-tests (click for more details):
T300_PyJobDistributor T900_distributed

Test: ubuntu-20.04.clang.python39.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: ubuntu-22.04.clang.python39.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: ubuntu.clang.python310.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: ubuntu.clang.python38.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: ubuntu.gcc.python312.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

branch: rosetta:commits 「№20836」
Commited by: Rocco Moretti
GitHub Pull Request link: 「№450」
Merge: 「a0cefad01」← 「dd61edab9」 code diff
Scheduled at: 2025-06-27 18:36:37.991205

	linux.clang	linux.gcc	linux.srlz	mac.clang
debug
release
unit

Pull Request №450 RosettaCommons/rosetta/main ← roccomoretti/rosetta/gemmi Merge: a0cefad01b3959ae8327a8931f5ad8c3fad27ea9←dd61edab9846657848b9b056b0202ea3dd1468a3 Update mmCIF parsing ---------------- Merge commit message: Turn off Gemmi wrapping to see if we can fix the PyRosetta build.

...

Test: ubuntu.gcc.code_quality.merge_size

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Test: linux.gcc.mpi.serialization.integration.mpi

Failed sub-tests (click for more details):
replica_docking

Test: linux.clang.integration.release_debug_no_symbols

Failed sub-tests (click for more details):
InterfaceAnalyzer_ligand cyclization features jd2test_PDBin_mmCIFout jd2test_PDBin_mmCIFout_extra_data_separate jd2test_mmCIFIO ligand_motif_identification mmtfIO_score_test pymol_cif restype_converter simple_grafting_movers simple_metrics_b_factor simple_metrics_per_residue

Test: mac.clang.python39.integration

Failed sub-tests (click for more details):
InterfaceAnalyzer_ligand jd2test_PDBin_mmCIFout jd2test_PDBin_mmCIFout_extra_data_separate jd2test_mmCIFIO ligand_motif_identification mmtfIO_score_test pymol_cif restype_converter simple_grafting_movers simple_metrics_b_factor simple_metrics_per_residue

Test: linux.clang.performance

Failed sub-tests (click for more details):
instantiate_modules_packer_palettes

Test: mac.clang.unit

Failed sub-tests (click for more details):
protocols:Regex_based_cdr_detection_tests:test_cdr_regions_detection

Test: ubuntu-20.04.clang.python39.unit

Failed sub-tests (click for more details):
protocols:Regex_based_cdr_detection_tests:test_cdr_regions_detection

Test: ubuntu-22.04.clang.python39.unit

Failed sub-tests (click for more details):
protocols:Regex_based_cdr_detection_tests:test_cdr_regions_detection

branch: rosetta:commits 「№20835」
Commited by: Rocco Moretti
GitHub Pull Request link: 「№450」
Merge: 「a0cefad01」← 「a9c1912c8」 code diff
Scheduled at: 2025-06-27 11:55:14.648632

	linux.clang	linux.gcc	linux.srlz	mac.clang
debug
release
unit

Pull Request №450 RosettaCommons/rosetta/main ← roccomoretti/rosetta/gemmi Merge: a0cefad01b3959ae8327a8931f5ad8c3fad27ea9←a9c1912c8502fa623f8c6e0491a20c6a2018e6f8 Update mmCIF parsing ---------------- Merge commit message: Forgotten file, cppcheck issues & beautification

...

Test: mac.clang.python38.PyRosetta.unit

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Test: ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit

View log

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Test: ubuntu.gcc.code_quality.merge_size

View log

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Test: linux.gcc.mpi.serialization.integration.mpi

Failed sub-tests (click for more details):
replica_docking

Test: linux.clang.integration.release_debug_no_symbols

Failed sub-tests (click for more details):
InterfaceAnalyzer_ligand cyclization features jd2test_PDBin_mmCIFout jd2test_PDBin_mmCIFout_extra_data_separate jd2test_mmCIFIO ligand_motif_identification mmtfIO_score_test pymol_cif restype_converter simple_grafting_movers simple_metrics_b_factor simple_metrics_per_residue

Test: mac.clang.python39.integration

Failed sub-tests (click for more details):
InterfaceAnalyzer_ligand jd2test_PDBin_mmCIFout jd2test_PDBin_mmCIFout_extra_data_separate jd2test_mmCIFIO ligand_motif_identification mmtfIO_score_test pymol_cif restype_converter simple_grafting_movers simple_metrics_b_factor simple_metrics_per_residue

Test: linux.clang.performance

Failed sub-tests (click for more details):
instantiate_modules_packer_palettes

Test: ubuntu-20.04.clang.python312.scripts.pyrosetta

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Test: mac.clang.unit

Failed sub-tests (click for more details):
protocols:Regex_based_cdr_detection_tests:test_cdr_regions_detection

branch: rosetta:commits 「№20834」
Commited by: Jason C. Klima
GitHub Pull Request link: 「№430」
Merge: 「a0cefad01」← 「77832bbec」 code diff
Scheduled at: 2025-06-26 20:09:48.791941

Pull Request №430 RosettaCommons/rosetta/main ← klimaj/rosetta/scores Merge: a0cefad01b3959ae8327a8931f5ad8c3fad27ea9←77832bbece03f0e3d2c3b58f63eb869aa7417660 Enable Pose.scores dictionary to store arbitrary python objects ---------------- Merge commit message: Add warnings for setPoseExtraScore float value precision change, type casting, and possible UnicodeDecodeError

...

Test: gcc-9.gcc.python37.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: m1.clang.python310.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: m1.clang.python311.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: m1.clang.python312.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: m1.clang.python313.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: m1.clang.python38.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: m1.clang.python39.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: mac.clang.python310.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: mac.clang.python311.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: mac.clang.python312.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: mac.clang.python313.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: mac.clang.python38.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: mac.clang.python39.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: ubuntu-20.04.clang.python39.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: ubuntu-22.04.clang.python39.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: ubuntu.clang.python310.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: ubuntu.clang.python311.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: ubuntu.clang.python312.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: ubuntu.clang.python313.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: ubuntu.clang.python38.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: ubuntu.clang.python39.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: ubuntu.gcc.python310.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: ubuntu.gcc.python311.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: ubuntu.gcc.python312.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: ubuntu.gcc.python313.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: ubuntu.gcc.python38.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

Test: ubuntu.gcc.python39.PyRosetta.unit

Failed sub-tests (click for more details):
C001_Carbohydrates_Demo01 D010_Pose_structure D020_Pose_scoring D030_Fold_tree D040_Movemap D050_Packer_task D060_Folding D070_Refinement D080_Loop_modeling D090_Ala_scan D100_Docking D110_DNA_interface D120_Ligand_interface T000_Imports T005_Bindings T006_Options T007_TracerIO T008_Serialization T009_Exceptions T010_LoadPDB T020_Pose_Bindings T040_Types T100_basic T110_numeric T120_core.RotamerSets T121_core.ResidueSelector T150_PyMOL_Integration T150_core.misc.lkball T190_Bindings_Utility T200_Scoring T201_Scoring_pre_talaris T220_AtomAtomPairEnergies T250_Constraints T300_PyJobDistributor T400_Refinement T500_Packing T600_Docking T650_LoopsKIC T660_LoopBuilding T700_FoldTree T800_ClassicRelax T850_SubClassing T860_SubClassing_EnergyMethods T870_SubClassing_EnergyMethods2 T880_Other T900_distributed Workshop2test Workshop3test Workshop4test Workshop5test Workshop6test Workshop7test Workshop8test Workshop9_my_shapes Workshop9test

branch: rosetta:commits 「№20833」
Commited by: Rocco Moretti
GitHub Pull Request link: 「№450」
Merge: 「a0cefad01」← 「3233817a0」 code diff
Scheduled at: 2025-06-26 19:22:35.787088

	linux.clang	linux.gcc	linux.srlz	mac.clang
debug
release
unit

Pull Request №450 RosettaCommons/rosetta/main ← roccomoretti/rosetta/gemmi Merge: a0cefad01b3959ae8327a8931f5ad8c3fad27ea9←3233817a0e306be4aa6b385b8db008761c4d842f Update mmCIF parsing ---------------- Merge commit message: Fix unused variable

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Test: mac.clang.python38.PyRosetta.unit

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Test: ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit

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Test: linux.gcc.code_quality.beautification

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Test: ubuntu.gcc.code_quality.cppcheck

Failed sub-tests (click for more details):
core/chemical/mmCIF/mmCIFParser.cc

Test: ubuntu.gcc.code_quality.merge_size

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Test: linux.gcc.mpi.serialization.integration.mpi

Failed sub-tests (click for more details):
replica_docking

Test: linux.clang.integration.release_debug_no_symbols

Failed sub-tests (click for more details):
InterfaceAnalyzer_ligand features jd2test_PDBin_mmCIFout jd2test_PDBin_mmCIFout_extra_data_separate jd2test_mmCIFIO ligand_motif_identification mmtfIO_score_test pymol_cif restype_converter simple_grafting_movers simple_metrics_b_factor simple_metrics_per_residue

Test: mac.clang.python39.integration

Failed sub-tests (click for more details):
InterfaceAnalyzer_ligand jd2test_PDBin_mmCIFout jd2test_PDBin_mmCIFout_extra_data_separate jd2test_mmCIFIO ligand_motif_identification mmtfIO_score_test pymol_cif restype_converter simple_grafting_movers simple_metrics_b_factor simple_metrics_per_residue

Test: linux.clang.performance

Failed sub-tests (click for more details):
instantiate_modules_packer_palettes

Test: ubuntu-20.04.clang.python36.scientific.protein_data_bank_diagnostic.cif

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Test: ubuntu-20.04.clang.python312.scripts.pyrosetta

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Test: mac.clang.unit

Failed sub-tests (click for more details):
protocols:Regex_based_cdr_detection_tests:test_cdr_regions_detection

branch: rosetta:commits 「№20832」
Commited by: Rocco Moretti
GitHub Pull Request link: 「№450」
Merge: 「a0cefad01」← 「142355538」 code diff
Scheduled at: 2025-06-26 19:02:24.781406

	linux.clang	linux.gcc	linux.srlz	mac.clang
debug
release
unit

Pull Request №450 RosettaCommons/rosetta/main ← roccomoretti/rosetta/gemmi Merge: a0cefad01b3959ae8327a8931f5ad8c3fad27ea9←142355538e0937b320e988e86b9ee168d26701ae Update mmCIF parsing ---------------- Merge commit message: We should be catching poses with zero residues in the diagnostic test. Some of them are 'legitimate' (e.g. calpha only structures), but some errors can sneak through by just ignoring content.

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Test: ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit

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Test: linux.clang.build.debug

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Test: linux.gcc.build.debug

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Test: linux.gcc.cxx11thread.serialization.build.debug

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Test: linux.gcc.mpi.build.debug

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Test: linux.gcc.mpi.serialization.build.debug

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Test: linux.clang.build.ninja_debug

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Test: linux.gcc.code_quality.beautification

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Test: linux.gcc.mpi.serialization.integration.mpi

Failed sub-tests (click for more details):
replica_docking

Test: linux.clang.integration.release_debug_no_symbols

Failed sub-tests (click for more details):
InterfaceAnalyzer_ligand cyclization ddG_of_mutation features jd2test_PDBin_mmCIFout jd2test_PDBin_mmCIFout_extra_data_separate jd2test_mmCIFIO ligand_motif_identification mmtfIO_score_test pymol_cif restype_converter simple_grafting_movers simple_metrics_b_factor simple_metrics_per_residue

Test: linux.gcc.cxx11thread.integration.thread

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Test: linux.clang.performance

Failed sub-tests (click for more details):
instantiate_modules_packer_palettes

Test: linux.clang.unit

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Test: linux.gcc.cxx11thread.serialization.unit

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Test: linux.gcc.unit

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Test: mac.clang.unit

Failed sub-tests (click for more details):
protocols:Regex_based_cdr_detection_tests:test_cdr_regions_detection

branch: rosetta:commits 「№20831」
Commited by: Jason C. Klima
GitHub Pull Request link: 「№431」
Merge: 「a0cefad01」← 「e71ced13f」 code diff
Scheduled at: 2025-06-24 20:37:28.656050

Pull Request №431 RosettaCommons/rosetta/main ← klimaj/rosetta/pose_io Merge: a0cefad01b3959ae8327a8931f5ad8c3fad27ea9←e71ced13f721ebd0dadb6b027f0872a3a200b891 Enhance pyrosetta and pyrosetta.distributed I/O interfaces ---------------- Merge commit message: Test args and kwargs with pose_from_pdbstring

Summary

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Legend:

queued	Queued Test
queued for comparison	Test finished running but not yet compared
running	Test is Running right now
comparing	Test results is now comparing with previous results
finished	Test is finished without errors
failed	Test failed
build Failed	Test could not be run because build failed
script failed	Test results is unknow because test-script failed
canceled	Test was canceled