branch: rosetta:release 「№384」
Commited by: Sergey Lyskov
GitHub commit link: 「ca096dac4f43ee5e」
Difference from previous tested commit:  code diff
Commit date: 2024-06-14 18:57:57
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
PyRosetta.unit icc.icc.build.debug mysql postgres mpi mpi.serialization OpenCL build.header build.levels static serialization performance profile linux.clang.python310.release.PyRosetta.Debug linux.clang.python311.release.PyRosetta.Debug linux.clang.python312.release.PyRosetta.Debug linux.clang.python37.release.PyRosetta.Debug linux.clang.python38.release.PyRosetta.Debug linux.clang.python39.release.PyRosetta.Debug linux.clang.python310.release.PyRosetta.MinSizeRel linux.clang.python311.release.PyRosetta.MinSizeRel linux.clang.python312.release.PyRosetta.MinSizeRel linux.clang.python37.release.PyRosetta.MinSizeRel linux.clang.python38.release.PyRosetta.MinSizeRel linux.clang.python39.release.PyRosetta.MinSizeRel m1.clang.python310.release.PyRosetta.MinSizeRel m1.clang.python311.release.PyRosetta.MinSizeRel m1.clang.python312.release.PyRosetta.MinSizeRel m1.clang.python38.release.PyRosetta.MinSizeRel m1.clang.python39.release.PyRosetta.MinSizeRel mac.clang.python310.release.PyRosetta.MinSizeRel mac.clang.python311.release.PyRosetta.MinSizeRel mac.clang.python312.release.PyRosetta.MinSizeRel mac.clang.python38.release.PyRosetta.MinSizeRel mac.clang.python39.release.PyRosetta.MinSizeRel ubuntu.clang.python310.release.PyRosetta.MinSizeRel ubuntu.clang.python311.release.PyRosetta.MinSizeRel ubuntu.clang.python312.release.PyRosetta.MinSizeRel ubuntu.clang.python37.release.PyRosetta.MinSizeRel ubuntu.clang.python38.release.PyRosetta.MinSizeRel ubuntu.clang.python39.release.PyRosetta.MinSizeRel linux.clang.cxx11thread.serialization.python310.release.PyRosetta.Release linux.clang.cxx11thread.serialization.python311.release.PyRosetta.Release linux.clang.cxx11thread.serialization.python312.release.PyRosetta.Release linux.clang.cxx11thread.serialization.python38.release.PyRosetta.Release linux.clang.cxx11thread.serialization.python39.release.PyRosetta.Release linux.clang.python310.release.PyRosetta.Release linux.clang.python311.release.PyRosetta.Release linux.clang.python312.release.PyRosetta.Release linux.clang.python37.release.PyRosetta.Release linux.clang.python38.release.PyRosetta.Release linux.clang.python39.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python310.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python311.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python39.release.PyRosetta.Release m1.clang.python310.release.PyRosetta.Release m1.clang.python311.release.PyRosetta.Release m1.clang.python312.release.PyRosetta.Release m1.clang.python38.release.PyRosetta.Release m1.clang.python39.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python310.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python311.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python312.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python38.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python39.release.PyRosetta.Release mac.clang.python310.release.PyRosetta.Release mac.clang.python311.release.PyRosetta.Release mac.clang.python312.release.PyRosetta.Release mac.clang.python38.release.PyRosetta.Release mac.clang.python39.release.PyRosetta.Release ubuntu.clang.cxx11thread.serialization.python310.release.PyRosetta.Release ubuntu.clang.cxx11thread.serialization.python311.release.PyRosetta.Release ubuntu.clang.cxx11thread.serialization.python312.release.PyRosetta.Release ubuntu.clang.cxx11thread.serialization.python38.release.PyRosetta.Release ubuntu.clang.cxx11thread.serialization.python39.release.PyRosetta.Release ubuntu.clang.python310.release.PyRosetta.Release ubuntu.clang.python311.release.PyRosetta.Release ubuntu.clang.python312.release.PyRosetta.Release ubuntu.clang.python37.release.PyRosetta.Release ubuntu.clang.python38.release.PyRosetta.Release ubuntu.clang.python39.release.PyRosetta.Release linux.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python37.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python38.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python38.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release release.PyRosetta.documentation linux.gcc.static.release.binary m1.clang.static.release.binary mac.clang.static.release.binary ubuntu.gcc.static.release.binary release.rosetta.documentation release.source scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify m1.clang.python39.unit util.apps

fix PyRosetta builds (#69)

...


branch: rosetta:release 「№383」
Commited by: Noora Azadvari
GitHub commit link: 「7e25e4a52fb93e5a」
Difference from previous tested commit:  code diff
Commit date: 2024-05-29 13:50:19
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
PyRosetta.unit icc.icc.build.debug mysql postgres mpi mpi.serialization OpenCL build.header build.levels static serialization performance profile linux.clang.python310.release.PyRosetta.Debug linux.clang.python311.release.PyRosetta.Debug linux.clang.python312.release.PyRosetta.Debug linux.clang.python37.release.PyRosetta.Debug linux.clang.python38.release.PyRosetta.Debug linux.clang.python39.release.PyRosetta.Debug linux.clang.python310.release.PyRosetta.MinSizeRel linux.clang.python311.release.PyRosetta.MinSizeRel linux.clang.python312.release.PyRosetta.MinSizeRel linux.clang.python37.release.PyRosetta.MinSizeRel linux.clang.python38.release.PyRosetta.MinSizeRel linux.clang.python39.release.PyRosetta.MinSizeRel m1.clang.python310.release.PyRosetta.MinSizeRel m1.clang.python311.release.PyRosetta.MinSizeRel m1.clang.python312.release.PyRosetta.MinSizeRel m1.clang.python38.release.PyRosetta.MinSizeRel m1.clang.python39.release.PyRosetta.MinSizeRel mac.clang.python310.release.PyRosetta.MinSizeRel mac.clang.python311.release.PyRosetta.MinSizeRel mac.clang.python312.release.PyRosetta.MinSizeRel mac.clang.python38.release.PyRosetta.MinSizeRel mac.clang.python39.release.PyRosetta.MinSizeRel ubuntu.clang.python310.release.PyRosetta.MinSizeRel ubuntu.clang.python311.release.PyRosetta.MinSizeRel ubuntu.clang.python312.release.PyRosetta.MinSizeRel ubuntu.clang.python37.release.PyRosetta.MinSizeRel ubuntu.clang.python38.release.PyRosetta.MinSizeRel ubuntu.clang.python39.release.PyRosetta.MinSizeRel linux.clang.python310.release.PyRosetta.Release linux.clang.python311.release.PyRosetta.Release linux.clang.python312.release.PyRosetta.Release linux.clang.python37.release.PyRosetta.Release linux.clang.python38.release.PyRosetta.Release linux.clang.python39.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python310.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python311.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python39.release.PyRosetta.Release m1.clang.python310.release.PyRosetta.Release m1.clang.python311.release.PyRosetta.Release m1.clang.python312.release.PyRosetta.Release m1.clang.python38.release.PyRosetta.Release m1.clang.python39.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python310.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python311.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python312.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python38.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python39.release.PyRosetta.Release mac.clang.python310.release.PyRosetta.Release mac.clang.python311.release.PyRosetta.Release mac.clang.python312.release.PyRosetta.Release mac.clang.python38.release.PyRosetta.Release mac.clang.python39.release.PyRosetta.Release ubuntu.clang.python310.release.PyRosetta.Release ubuntu.clang.python311.release.PyRosetta.Release ubuntu.clang.python312.release.PyRosetta.Release ubuntu.clang.python37.release.PyRosetta.Release ubuntu.clang.python38.release.PyRosetta.Release ubuntu.clang.python39.release.PyRosetta.Release linux.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python37.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python38.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python38.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release release.PyRosetta.documentation linux.gcc.static.release.binary m1.clang.static.release.binary mac.clang.static.release.binary ubuntu.gcc.static.release.binary release.rosetta.documentation release.source scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify m1.clang.python39.unit util.apps

set a prefix for util files (#57) The prefix is the argument passed via class_name. It is added in the description of --class_name.

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branch: rosetta:release 「№382」
Commited by: Claiborne Tydings
GitHub commit link: 「ec708a4c40449ea4」
Difference from previous tested commit:  code diff
Commit date: 2024-05-07 15:50:27
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
PyRosetta.unit icc.icc.build.debug mysql postgres mpi mpi.serialization OpenCL build.header build.levels static serialization performance profile linux.clang.python310.release.PyRosetta.Debug linux.clang.python311.release.PyRosetta.Debug linux.clang.python312.release.PyRosetta.Debug linux.clang.python37.release.PyRosetta.Debug linux.clang.python38.release.PyRosetta.Debug linux.clang.python39.release.PyRosetta.Debug linux.clang.python310.release.PyRosetta.MinSizeRel linux.clang.python311.release.PyRosetta.MinSizeRel linux.clang.python312.release.PyRosetta.MinSizeRel linux.clang.python37.release.PyRosetta.MinSizeRel linux.clang.python38.release.PyRosetta.MinSizeRel linux.clang.python39.release.PyRosetta.MinSizeRel m1.clang.python310.release.PyRosetta.MinSizeRel m1.clang.python311.release.PyRosetta.MinSizeRel m1.clang.python312.release.PyRosetta.MinSizeRel m1.clang.python38.release.PyRosetta.MinSizeRel m1.clang.python39.release.PyRosetta.MinSizeRel mac.clang.python310.release.PyRosetta.MinSizeRel mac.clang.python311.release.PyRosetta.MinSizeRel mac.clang.python312.release.PyRosetta.MinSizeRel mac.clang.python38.release.PyRosetta.MinSizeRel mac.clang.python39.release.PyRosetta.MinSizeRel ubuntu.clang.python310.release.PyRosetta.MinSizeRel ubuntu.clang.python311.release.PyRosetta.MinSizeRel ubuntu.clang.python312.release.PyRosetta.MinSizeRel ubuntu.clang.python37.release.PyRosetta.MinSizeRel ubuntu.clang.python38.release.PyRosetta.MinSizeRel ubuntu.clang.python39.release.PyRosetta.MinSizeRel linux.clang.python310.release.PyRosetta.Release linux.clang.python311.release.PyRosetta.Release linux.clang.python312.release.PyRosetta.Release linux.clang.python37.release.PyRosetta.Release linux.clang.python38.release.PyRosetta.Release linux.clang.python39.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python310.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python311.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python39.release.PyRosetta.Release m1.clang.python310.release.PyRosetta.Release m1.clang.python311.release.PyRosetta.Release m1.clang.python312.release.PyRosetta.Release m1.clang.python38.release.PyRosetta.Release m1.clang.python39.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python310.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python311.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python312.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python38.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python39.release.PyRosetta.Release mac.clang.python310.release.PyRosetta.Release mac.clang.python311.release.PyRosetta.Release mac.clang.python312.release.PyRosetta.Release mac.clang.python38.release.PyRosetta.Release mac.clang.python39.release.PyRosetta.Release ubuntu.clang.python310.release.PyRosetta.Release ubuntu.clang.python311.release.PyRosetta.Release ubuntu.clang.python312.release.PyRosetta.Release ubuntu.clang.python37.release.PyRosetta.Release ubuntu.clang.python38.release.PyRosetta.Release ubuntu.clang.python39.release.PyRosetta.Release linux.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python37.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python38.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python38.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release release.PyRosetta.documentation linux.gcc.static.release.binary m1.clang.static.release.binary mac.clang.static.release.binary ubuntu.gcc.static.release.binary release.rosetta.documentation release.source scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify m1.clang.python39.unit util.apps

Crosslinker Mover lanthionine (#24) This is the code to enable lanthipeptide modeling in Rosetta. Crosslinker updated to include lanthionine and methyllanthionine connections. -This includes D/L ALA steriochem for lanthionine and D/L and 3 R/S steriochem for methylanthionine (B(L/D)(R/S)) Dehydrated amino acid patches for DBU and DHU were updated/added The AmbiguouosNMRDistanceConstraints were updated to work for NCAA (hardcoding was generalized) Additionally, I noticed that the thioether lariat in simple cyc pep predict only samples cis omega bonds for the N terminal residue. I changed this to trans, which should be energetically preferred.

...


branch: rosetta:release 「№381」
Commited by: Rocco Moretti
GitHub commit link: 「a34b73c40fe9c615」
Difference from previous tested commit:  code diff
Commit date: 2024-05-02 17:22:03
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
PyRosetta.unit icc.icc.build.debug mysql postgres mpi mpi.serialization OpenCL build.header build.levels static serialization performance profile linux.clang.python310.release.PyRosetta.Debug linux.clang.python311.release.PyRosetta.Debug linux.clang.python312.release.PyRosetta.Debug linux.clang.python37.release.PyRosetta.Debug linux.clang.python38.release.PyRosetta.Debug linux.clang.python39.release.PyRosetta.Debug linux.clang.python310.release.PyRosetta.MinSizeRel linux.clang.python311.release.PyRosetta.MinSizeRel linux.clang.python312.release.PyRosetta.MinSizeRel linux.clang.python37.release.PyRosetta.MinSizeRel linux.clang.python38.release.PyRosetta.MinSizeRel linux.clang.python39.release.PyRosetta.MinSizeRel m1.clang.python310.release.PyRosetta.MinSizeRel m1.clang.python311.release.PyRosetta.MinSizeRel m1.clang.python312.release.PyRosetta.MinSizeRel m1.clang.python38.release.PyRosetta.MinSizeRel m1.clang.python39.release.PyRosetta.MinSizeRel mac.clang.python310.release.PyRosetta.MinSizeRel mac.clang.python311.release.PyRosetta.MinSizeRel mac.clang.python312.release.PyRosetta.MinSizeRel mac.clang.python38.release.PyRosetta.MinSizeRel mac.clang.python39.release.PyRosetta.MinSizeRel ubuntu.clang.python310.release.PyRosetta.MinSizeRel ubuntu.clang.python311.release.PyRosetta.MinSizeRel ubuntu.clang.python312.release.PyRosetta.MinSizeRel ubuntu.clang.python37.release.PyRosetta.MinSizeRel ubuntu.clang.python38.release.PyRosetta.MinSizeRel ubuntu.clang.python39.release.PyRosetta.MinSizeRel linux.clang.python310.release.PyRosetta.Release linux.clang.python311.release.PyRosetta.Release linux.clang.python312.release.PyRosetta.Release linux.clang.python37.release.PyRosetta.Release linux.clang.python38.release.PyRosetta.Release linux.clang.python39.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python310.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python311.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python39.release.PyRosetta.Release m1.clang.python310.release.PyRosetta.Release m1.clang.python311.release.PyRosetta.Release m1.clang.python312.release.PyRosetta.Release m1.clang.python38.release.PyRosetta.Release m1.clang.python39.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python310.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python311.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python312.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python38.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python39.release.PyRosetta.Release mac.clang.python310.release.PyRosetta.Release mac.clang.python311.release.PyRosetta.Release mac.clang.python312.release.PyRosetta.Release mac.clang.python38.release.PyRosetta.Release mac.clang.python39.release.PyRosetta.Release ubuntu.clang.python310.release.PyRosetta.Release ubuntu.clang.python311.release.PyRosetta.Release ubuntu.clang.python312.release.PyRosetta.Release ubuntu.clang.python37.release.PyRosetta.Release ubuntu.clang.python38.release.PyRosetta.Release ubuntu.clang.python39.release.PyRosetta.Release linux.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python37.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python38.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python38.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release release.PyRosetta.documentation linux.gcc.static.release.binary m1.clang.static.release.binary mac.clang.static.release.binary ubuntu.gcc.static.release.binary release.rosetta.documentation release.source scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify m1.clang.python39.unit util.apps

Fix pre-compile script calls on Windows build (#58) The windows build test on the test server doesn't seem to be updating options appropriately. It looks like the issue is that the *.sh files aren't being properly called -- adding "bash" to the front of them allows them to run properly.

...


branch: rosetta:release 「№380」
Commited by: Rocco Moretti
GitHub commit link: 「117e2f6f543b0d8d」
Difference from previous tested commit:  code diff
Commit date: 2024-04-29 12:38:30
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
PyRosetta.unit icc.icc.build.debug mysql postgres mpi mpi.serialization OpenCL build.header build.levels static serialization performance profile linux.clang.python310.release.PyRosetta.Debug linux.clang.python311.release.PyRosetta.Debug linux.clang.python312.release.PyRosetta.Debug linux.clang.python37.release.PyRosetta.Debug linux.clang.python38.release.PyRosetta.Debug linux.clang.python39.release.PyRosetta.Debug linux.clang.python310.release.PyRosetta.MinSizeRel linux.clang.python311.release.PyRosetta.MinSizeRel linux.clang.python312.release.PyRosetta.MinSizeRel linux.clang.python37.release.PyRosetta.MinSizeRel linux.clang.python38.release.PyRosetta.MinSizeRel linux.clang.python39.release.PyRosetta.MinSizeRel m1.clang.python310.release.PyRosetta.MinSizeRel m1.clang.python311.release.PyRosetta.MinSizeRel m1.clang.python312.release.PyRosetta.MinSizeRel m1.clang.python38.release.PyRosetta.MinSizeRel m1.clang.python39.release.PyRosetta.MinSizeRel mac.clang.python310.release.PyRosetta.MinSizeRel mac.clang.python311.release.PyRosetta.MinSizeRel mac.clang.python312.release.PyRosetta.MinSizeRel mac.clang.python38.release.PyRosetta.MinSizeRel mac.clang.python39.release.PyRosetta.MinSizeRel ubuntu.clang.python310.release.PyRosetta.MinSizeRel ubuntu.clang.python311.release.PyRosetta.MinSizeRel ubuntu.clang.python312.release.PyRosetta.MinSizeRel ubuntu.clang.python37.release.PyRosetta.MinSizeRel ubuntu.clang.python38.release.PyRosetta.MinSizeRel ubuntu.clang.python39.release.PyRosetta.MinSizeRel linux.clang.python310.release.PyRosetta.Release linux.clang.python311.release.PyRosetta.Release linux.clang.python312.release.PyRosetta.Release linux.clang.python37.release.PyRosetta.Release linux.clang.python38.release.PyRosetta.Release linux.clang.python39.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python310.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python311.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python39.release.PyRosetta.Release m1.clang.python310.release.PyRosetta.Release m1.clang.python311.release.PyRosetta.Release m1.clang.python312.release.PyRosetta.Release m1.clang.python38.release.PyRosetta.Release m1.clang.python39.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python310.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python311.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python312.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python38.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python39.release.PyRosetta.Release mac.clang.python310.release.PyRosetta.Release mac.clang.python311.release.PyRosetta.Release mac.clang.python312.release.PyRosetta.Release mac.clang.python38.release.PyRosetta.Release mac.clang.python39.release.PyRosetta.Release ubuntu.clang.python310.release.PyRosetta.Release ubuntu.clang.python311.release.PyRosetta.Release ubuntu.clang.python312.release.PyRosetta.Release ubuntu.clang.python37.release.PyRosetta.Release ubuntu.clang.python38.release.PyRosetta.Release ubuntu.clang.python39.release.PyRosetta.Release linux.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python37.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python38.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python38.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release release.PyRosetta.documentation linux.gcc.static.release.binary m1.clang.static.release.binary mac.clang.static.release.binary ubuntu.gcc.static.release.binary release.rosetta.documentation release.source scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify m1.clang.python39.unit util.apps

Update SCons for compilation with Python 3.12 (#54) Python 3.12 removed the imp module, which means our current SCons 3.0.4 doesn't work with it. Upgrading to SCons 4 will fix this. However, this removes support for building with Python 2.7 -- I think at this point this is acceptable, as anyone compiling Rosetta will likely have a Python3 version installed for RFDiffusion, etc. anyway. Additionally, the error message printed is relatively user friendly: ``` scons: *** SCons version 4.2.0 does not run under Python version 2.7. Python >= 3.5 is required. ``` SCons 4.2.0 was selected as it's the last version which supports Python 3.5 -- I don't know how many people that will actually help, but we don't need to be bleeding edge. Some additional files were changed to address warning messages with a Python 3.12 build. (Note that the current external/scons-local directory was deleted and then re-created from the official download. No manual changes were made, save for deleting some unnecessary documentation files.)

...


branch: rosetta:release 「№379」
Commited by: Rocco Moretti
GitHub commit link: 「baad48240e60f121」
Difference from previous tested commit:  code diff
Commit date: 2024-04-24 12:34:17
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
PyRosetta.unit icc.icc.build.debug mysql postgres mpi mpi.serialization OpenCL build.header build.levels static serialization performance profile linux.clang.python310.release.PyRosetta.Debug linux.clang.python311.release.PyRosetta.Debug linux.clang.python312.release.PyRosetta.Debug linux.clang.python37.release.PyRosetta.Debug linux.clang.python38.release.PyRosetta.Debug linux.clang.python39.release.PyRosetta.Debug linux.clang.python310.release.PyRosetta.MinSizeRel linux.clang.python311.release.PyRosetta.MinSizeRel linux.clang.python312.release.PyRosetta.MinSizeRel linux.clang.python37.release.PyRosetta.MinSizeRel linux.clang.python38.release.PyRosetta.MinSizeRel linux.clang.python39.release.PyRosetta.MinSizeRel m1.clang.python310.release.PyRosetta.MinSizeRel m1.clang.python311.release.PyRosetta.MinSizeRel m1.clang.python312.release.PyRosetta.MinSizeRel m1.clang.python38.release.PyRosetta.MinSizeRel m1.clang.python39.release.PyRosetta.MinSizeRel mac.clang.python310.release.PyRosetta.MinSizeRel mac.clang.python311.release.PyRosetta.MinSizeRel mac.clang.python312.release.PyRosetta.MinSizeRel mac.clang.python38.release.PyRosetta.MinSizeRel mac.clang.python39.release.PyRosetta.MinSizeRel ubuntu.clang.python310.release.PyRosetta.MinSizeRel ubuntu.clang.python311.release.PyRosetta.MinSizeRel ubuntu.clang.python312.release.PyRosetta.MinSizeRel ubuntu.clang.python37.release.PyRosetta.MinSizeRel ubuntu.clang.python38.release.PyRosetta.MinSizeRel ubuntu.clang.python39.release.PyRosetta.MinSizeRel linux.clang.python310.release.PyRosetta.Release linux.clang.python311.release.PyRosetta.Release linux.clang.python312.release.PyRosetta.Release linux.clang.python37.release.PyRosetta.Release linux.clang.python38.release.PyRosetta.Release linux.clang.python39.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python310.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python311.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python39.release.PyRosetta.Release m1.clang.python310.release.PyRosetta.Release m1.clang.python311.release.PyRosetta.Release m1.clang.python312.release.PyRosetta.Release m1.clang.python38.release.PyRosetta.Release m1.clang.python39.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python310.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python311.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python312.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python38.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python39.release.PyRosetta.Release mac.clang.python310.release.PyRosetta.Release mac.clang.python311.release.PyRosetta.Release mac.clang.python312.release.PyRosetta.Release mac.clang.python38.release.PyRosetta.Release mac.clang.python39.release.PyRosetta.Release ubuntu.clang.python310.release.PyRosetta.Release ubuntu.clang.python311.release.PyRosetta.Release ubuntu.clang.python312.release.PyRosetta.Release ubuntu.clang.python37.release.PyRosetta.Release ubuntu.clang.python38.release.PyRosetta.Release ubuntu.clang.python39.release.PyRosetta.Release linux.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python37.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python38.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python38.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release release.PyRosetta.documentation linux.gcc.static.release.binary m1.clang.static.release.binary mac.clang.static.release.binary ubuntu.gcc.static.release.binary release.rosetta.documentation release.source scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify m1.clang.python39.unit util.apps

Update benchmark scripts for Python3.12. (#51) Python 3.12 gets rid of the imp module. Moreover, it gets rid of imp.load_source() altogether. We thus need to change around how we do the magic 'import from parent directory' statement. There are also a few other things which were popping up warnings when I ran things locally.



branch: rosetta:release 「№378」
Commited by: Moritz Ertelt
GitHub commit link: 「bc4dfa1b240a4138」
Difference from previous tested commit:  code diff
Commit date: 2024-04-16 11:39:11
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
PyRosetta.unit icc.icc.build.debug mysql postgres mpi mpi.serialization OpenCL build.header build.levels static serialization performance profile linux.clang.python310.release.PyRosetta.Debug linux.clang.python311.release.PyRosetta.Debug linux.clang.python312.release.PyRosetta.Debug linux.clang.python37.release.PyRosetta.Debug linux.clang.python38.release.PyRosetta.Debug linux.clang.python39.release.PyRosetta.Debug linux.clang.python310.release.PyRosetta.MinSizeRel linux.clang.python311.release.PyRosetta.MinSizeRel linux.clang.python312.release.PyRosetta.MinSizeRel linux.clang.python37.release.PyRosetta.MinSizeRel linux.clang.python38.release.PyRosetta.MinSizeRel linux.clang.python39.release.PyRosetta.MinSizeRel m1.clang.python310.release.PyRosetta.MinSizeRel m1.clang.python311.release.PyRosetta.MinSizeRel m1.clang.python312.release.PyRosetta.MinSizeRel m1.clang.python38.release.PyRosetta.MinSizeRel m1.clang.python39.release.PyRosetta.MinSizeRel mac.clang.python310.release.PyRosetta.MinSizeRel mac.clang.python311.release.PyRosetta.MinSizeRel mac.clang.python312.release.PyRosetta.MinSizeRel mac.clang.python38.release.PyRosetta.MinSizeRel mac.clang.python39.release.PyRosetta.MinSizeRel ubuntu.clang.python310.release.PyRosetta.MinSizeRel ubuntu.clang.python311.release.PyRosetta.MinSizeRel ubuntu.clang.python312.release.PyRosetta.MinSizeRel ubuntu.clang.python37.release.PyRosetta.MinSizeRel ubuntu.clang.python38.release.PyRosetta.MinSizeRel ubuntu.clang.python39.release.PyRosetta.MinSizeRel linux.clang.python310.release.PyRosetta.Release linux.clang.python311.release.PyRosetta.Release linux.clang.python312.release.PyRosetta.Release linux.clang.python37.release.PyRosetta.Release linux.clang.python38.release.PyRosetta.Release linux.clang.python39.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python310.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python311.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python39.release.PyRosetta.Release m1.clang.python310.release.PyRosetta.Release m1.clang.python311.release.PyRosetta.Release m1.clang.python312.release.PyRosetta.Release m1.clang.python38.release.PyRosetta.Release m1.clang.python39.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python310.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python311.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python312.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python38.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python39.release.PyRosetta.Release mac.clang.python310.release.PyRosetta.Release mac.clang.python311.release.PyRosetta.Release mac.clang.python312.release.PyRosetta.Release mac.clang.python38.release.PyRosetta.Release mac.clang.python39.release.PyRosetta.Release ubuntu.clang.python310.release.PyRosetta.Release ubuntu.clang.python311.release.PyRosetta.Release ubuntu.clang.python312.release.PyRosetta.Release ubuntu.clang.python37.release.PyRosetta.Release ubuntu.clang.python38.release.PyRosetta.Release ubuntu.clang.python39.release.PyRosetta.Release linux.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python37.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python38.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python38.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release release.PyRosetta.documentation linux.gcc.static.release.binary m1.clang.static.release.binary mac.clang.static.release.binary ubuntu.gcc.static.release.binary release.rosetta.documentation release.source scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify m1.clang.python39.unit util.apps

QOL update to the PerResidueEsmProbabilitiesMetric (#26) This short PR: * Adds the proper citation for ESM * Adds some checks for NaNs/Infs to the Perplexity/softmax calculation * fixes a typo in MIFST.cc * Prevents an error in SampleSequenceFromProbabilities when calling the SimpleThreadingMover without mutations * Fixes const behavior in SampleSequenceFromProbabilities --------- Co-authored-by: moritzertelt <moritz.ertelt@gmail.com>

...


branch: rosetta:release 「№377」
Commited by: Sergey Lyskov
GitHub commit link: 「d972b59c530a12af」
Difference from previous tested commit:  code diff
Commit date: 2024-04-02 19:06:29
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
PyRosetta.unit icc.icc.build.debug mysql postgres mpi mpi.serialization OpenCL build.header build.levels static serialization performance profile linux.clang.python310.release.PyRosetta.Debug linux.clang.python311.release.PyRosetta.Debug linux.clang.python312.release.PyRosetta.Debug linux.clang.python37.release.PyRosetta.Debug linux.clang.python38.release.PyRosetta.Debug linux.clang.python39.release.PyRosetta.Debug linux.clang.python310.release.PyRosetta.MinSizeRel linux.clang.python311.release.PyRosetta.MinSizeRel linux.clang.python312.release.PyRosetta.MinSizeRel linux.clang.python37.release.PyRosetta.MinSizeRel linux.clang.python38.release.PyRosetta.MinSizeRel linux.clang.python39.release.PyRosetta.MinSizeRel m1.clang.python310.release.PyRosetta.MinSizeRel m1.clang.python311.release.PyRosetta.MinSizeRel m1.clang.python312.release.PyRosetta.MinSizeRel m1.clang.python38.release.PyRosetta.MinSizeRel m1.clang.python39.release.PyRosetta.MinSizeRel mac.clang.python310.release.PyRosetta.MinSizeRel mac.clang.python311.release.PyRosetta.MinSizeRel mac.clang.python312.release.PyRosetta.MinSizeRel mac.clang.python38.release.PyRosetta.MinSizeRel mac.clang.python39.release.PyRosetta.MinSizeRel ubuntu.clang.python310.release.PyRosetta.MinSizeRel ubuntu.clang.python311.release.PyRosetta.MinSizeRel ubuntu.clang.python312.release.PyRosetta.MinSizeRel ubuntu.clang.python37.release.PyRosetta.MinSizeRel ubuntu.clang.python38.release.PyRosetta.MinSizeRel ubuntu.clang.python39.release.PyRosetta.MinSizeRel linux.clang.python310.release.PyRosetta.Release linux.clang.python311.release.PyRosetta.Release linux.clang.python312.release.PyRosetta.Release linux.clang.python37.release.PyRosetta.Release linux.clang.python38.release.PyRosetta.Release linux.clang.python39.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python310.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python311.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python39.release.PyRosetta.Release m1.clang.python310.release.PyRosetta.Release m1.clang.python311.release.PyRosetta.Release m1.clang.python312.release.PyRosetta.Release m1.clang.python38.release.PyRosetta.Release m1.clang.python39.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python310.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python311.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python312.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python38.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python39.release.PyRosetta.Release mac.clang.python310.release.PyRosetta.Release mac.clang.python311.release.PyRosetta.Release mac.clang.python312.release.PyRosetta.Release mac.clang.python38.release.PyRosetta.Release mac.clang.python39.release.PyRosetta.Release ubuntu.clang.python310.release.PyRosetta.Release ubuntu.clang.python311.release.PyRosetta.Release ubuntu.clang.python312.release.PyRosetta.Release ubuntu.clang.python37.release.PyRosetta.Release ubuntu.clang.python38.release.PyRosetta.Release ubuntu.clang.python39.release.PyRosetta.Release linux.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python37.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python38.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python38.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release release.PyRosetta.documentation linux.gcc.static.release.binary m1.clang.static.release.binary mac.clang.static.release.binary ubuntu.gcc.static.release.binary release.rosetta.documentation release.source scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify m1.clang.python39.unit util.apps

fix PyRosetta build on Ubuntu-22.04 (#45)

...


branch: rosetta:release 「№376」
Commited by: Sergey Lyskov
GitHub commit link: 「2ed86d439d51d2fb」
Difference from previous tested commit:  code diff
Commit date: 2024-04-02 14:02:03
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
PyRosetta.unit icc.icc.build.debug mysql postgres mpi mpi.serialization build.header build.levels static serialization performance profile linux.clang.python310.release.PyRosetta.Debug linux.clang.python311.release.PyRosetta.Debug linux.clang.python312.release.PyRosetta.Debug linux.clang.python37.release.PyRosetta.Debug linux.clang.python38.release.PyRosetta.Debug linux.clang.python39.release.PyRosetta.Debug linux.clang.python310.release.PyRosetta.MinSizeRel linux.clang.python311.release.PyRosetta.MinSizeRel linux.clang.python312.release.PyRosetta.MinSizeRel linux.clang.python37.release.PyRosetta.MinSizeRel linux.clang.python38.release.PyRosetta.MinSizeRel linux.clang.python39.release.PyRosetta.MinSizeRel m1.clang.python310.release.PyRosetta.MinSizeRel m1.clang.python311.release.PyRosetta.MinSizeRel m1.clang.python312.release.PyRosetta.MinSizeRel m1.clang.python38.release.PyRosetta.MinSizeRel m1.clang.python39.release.PyRosetta.MinSizeRel ubuntu.clang.python310.release.PyRosetta.MinSizeRel ubuntu.clang.python311.release.PyRosetta.MinSizeRel ubuntu.clang.python312.release.PyRosetta.MinSizeRel ubuntu.clang.python37.release.PyRosetta.MinSizeRel ubuntu.clang.python38.release.PyRosetta.MinSizeRel ubuntu.clang.python39.release.PyRosetta.MinSizeRel linux.clang.python310.release.PyRosetta.Release linux.clang.python311.release.PyRosetta.Release linux.clang.python312.release.PyRosetta.Release linux.clang.python37.release.PyRosetta.Release linux.clang.python38.release.PyRosetta.Release linux.clang.python39.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python310.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python311.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python39.release.PyRosetta.Release m1.clang.python310.release.PyRosetta.Release m1.clang.python311.release.PyRosetta.Release m1.clang.python312.release.PyRosetta.Release m1.clang.python38.release.PyRosetta.Release m1.clang.python39.release.PyRosetta.Release ubuntu.clang.python310.release.PyRosetta.Release ubuntu.clang.python311.release.PyRosetta.Release ubuntu.clang.python312.release.PyRosetta.Release ubuntu.clang.python37.release.PyRosetta.Release ubuntu.clang.python38.release.PyRosetta.Release ubuntu.clang.python39.release.PyRosetta.Release linux.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python37.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python38.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release release.PyRosetta.documentation linux.gcc.static.release.binary m1.clang.static.release.binary ubuntu.gcc.static.release.binary release.rosetta.documentation release.source scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify m1.clang.python39.unit util.apps

rename torch extras and defines (#43) * rename torch extras and defines * fix integration tests

...


branch: rosetta:release 「№375」
Commited by: Sergey Lyskov
GitHub commit link: 「59f5585377a7bc55」
Difference from previous tested commit:  code diff
Commit date: 2024-03-29 20:58:38
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
PyRosetta.unit icc.icc.build.debug mysql postgres mpi mpi.serialization OpenCL build.header build.levels static serialization performance profile linux.clang.python310.release.PyRosetta.Debug linux.clang.python311.release.PyRosetta.Debug linux.clang.python312.release.PyRosetta.Debug linux.clang.python37.release.PyRosetta.Debug linux.clang.python38.release.PyRosetta.Debug linux.clang.python39.release.PyRosetta.Debug linux.clang.python310.release.PyRosetta.MinSizeRel linux.clang.python311.release.PyRosetta.MinSizeRel linux.clang.python312.release.PyRosetta.MinSizeRel linux.clang.python37.release.PyRosetta.MinSizeRel linux.clang.python38.release.PyRosetta.MinSizeRel linux.clang.python39.release.PyRosetta.MinSizeRel m1.clang.python310.release.PyRosetta.MinSizeRel m1.clang.python311.release.PyRosetta.MinSizeRel m1.clang.python312.release.PyRosetta.MinSizeRel m1.clang.python38.release.PyRosetta.MinSizeRel m1.clang.python39.release.PyRosetta.MinSizeRel mac.clang.python310.release.PyRosetta.MinSizeRel mac.clang.python311.release.PyRosetta.MinSizeRel mac.clang.python312.release.PyRosetta.MinSizeRel mac.clang.python38.release.PyRosetta.MinSizeRel mac.clang.python39.release.PyRosetta.MinSizeRel ubuntu.clang.python310.release.PyRosetta.MinSizeRel ubuntu.clang.python311.release.PyRosetta.MinSizeRel ubuntu.clang.python312.release.PyRosetta.MinSizeRel ubuntu.clang.python37.release.PyRosetta.MinSizeRel ubuntu.clang.python38.release.PyRosetta.MinSizeRel ubuntu.clang.python39.release.PyRosetta.MinSizeRel linux.clang.python310.release.PyRosetta.Release linux.clang.python311.release.PyRosetta.Release linux.clang.python312.release.PyRosetta.Release linux.clang.python37.release.PyRosetta.Release linux.clang.python38.release.PyRosetta.Release linux.clang.python39.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python310.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python311.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python39.release.PyRosetta.Release m1.clang.python310.release.PyRosetta.Release m1.clang.python311.release.PyRosetta.Release m1.clang.python312.release.PyRosetta.Release m1.clang.python38.release.PyRosetta.Release m1.clang.python39.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python310.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python311.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python312.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python38.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python39.release.PyRosetta.Release mac.clang.python310.release.PyRosetta.Release mac.clang.python311.release.PyRosetta.Release mac.clang.python312.release.PyRosetta.Release mac.clang.python38.release.PyRosetta.Release mac.clang.python39.release.PyRosetta.Release ubuntu.clang.python310.release.PyRosetta.Release ubuntu.clang.python311.release.PyRosetta.Release ubuntu.clang.python312.release.PyRosetta.Release ubuntu.clang.python37.release.PyRosetta.Release ubuntu.clang.python38.release.PyRosetta.Release ubuntu.clang.python39.release.PyRosetta.Release linux.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python37.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python38.release.PyRosetta.conda.Release linux.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python310.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python311.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python38.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python39.release.PyRosetta.conda.Release release.PyRosetta.documentation linux.gcc.static.release.binary m1.clang.static.release.binary mac.clang.static.release.binary ubuntu.gcc.static.release.binary release.rosetta.documentation release.source scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify m1.clang.python39.unit util.apps

update documentation and remove deprecated scripts (#41) * Update README.md * add reference docker files * add reference Docker files readme * remove deprecated Conda setup and instructions * remove PyRosetta deprecated build option and update readme

...


branch: rosetta:release 「№374」
Commited by: Steffen Möller
GitHub commit link: 「3e4fc2129edccfa8」
Difference from previous tested commit:  code diff
Commit date: 2024-03-22 14:08:18
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
PyRosetta.unit icc.icc.build.debug mysql postgres mpi mpi.serialization OpenCL build.header build.levels static serialization performance profile linux.clang.python310.release.PyRosetta.Debug linux.clang.python311.release.PyRosetta.Debug linux.clang.python312.release.PyRosetta.Debug linux.clang.python37.release.PyRosetta.Debug linux.clang.python38.release.PyRosetta.Debug linux.clang.python39.release.PyRosetta.Debug linux.clang.python310.release.PyRosetta.MinSizeRel linux.clang.python311.release.PyRosetta.MinSizeRel linux.clang.python312.release.PyRosetta.MinSizeRel linux.clang.python37.release.PyRosetta.MinSizeRel linux.clang.python38.release.PyRosetta.MinSizeRel linux.clang.python39.release.PyRosetta.MinSizeRel m1.clang.python310.release.PyRosetta.MinSizeRel m1.clang.python311.release.PyRosetta.MinSizeRel m1.clang.python312.release.PyRosetta.MinSizeRel m1.clang.python38.release.PyRosetta.MinSizeRel m1.clang.python39.release.PyRosetta.MinSizeRel mac.clang.python310.release.PyRosetta.MinSizeRel mac.clang.python311.release.PyRosetta.MinSizeRel mac.clang.python312.release.PyRosetta.MinSizeRel mac.clang.python38.release.PyRosetta.MinSizeRel mac.clang.python39.release.PyRosetta.MinSizeRel ubuntu.clang.python310.release.PyRosetta.MinSizeRel ubuntu.clang.python311.release.PyRosetta.MinSizeRel ubuntu.clang.python312.release.PyRosetta.MinSizeRel ubuntu.clang.python37.release.PyRosetta.MinSizeRel ubuntu.clang.python38.release.PyRosetta.MinSizeRel ubuntu.clang.python39.release.PyRosetta.MinSizeRel linux.clang.python310.release.PyRosetta.Release linux.clang.python311.release.PyRosetta.Release linux.clang.python312.release.PyRosetta.Release linux.clang.python37.release.PyRosetta.Release linux.clang.python38.release.PyRosetta.Release linux.clang.python39.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python310.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python311.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.Release m1.clang.cxx11thread.serialization.python39.release.PyRosetta.Release m1.clang.python310.release.PyRosetta.Release m1.clang.python311.release.PyRosetta.Release m1.clang.python312.release.PyRosetta.Release m1.clang.python38.release.PyRosetta.Release m1.clang.python39.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python310.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python311.release.PyRosetta.Release mac.clang.cxx11thread.serialization.python312.release.PyRosetta.Release