Pull Request №13 RosettaCommons/rosetta/main ← tydingcw/rosetta/b_factor_simple_metric Merge: a56f3bb97396edf2ddf8f4510ea54b017d3a3e00←cf7db5922e156a811384f828860ebd6bec02b136 B factor simple metric ---------------- Merge commit message: ran beautifier

• Summary
• integration.mpi 「1」
• integration.release_debug 「3」
• integration 「2」
• performance 「17」
• profile 「3」

Pull Request №19 RosettaCommons/rosetta/main ← lyskov/rosetta/main Merge: 16590e3c17c8caf165ec5828333b2d229cd190e9←08193060cd7160be87937a3724564fade5ea3ef5 regenerate Conda index only on non-Mac platforms ---------------- Merge commit message: regenerate Conda index only on non-Mac platforms

• Summary

Pull Request №18 RosettaCommons/rosetta/main ← roccomoretti/rosetta/fix_bcl_clang Merge: 8d112bda21a9ca7de12417818d676b62de3648bb←3c5e084936f3bad56656880148ce13c1288ae61e Update BCL to correct for Clang compilation ---------------- Merge commit message: Update BCL to correct for Clang compilation The update to the BCL repository resulted in issues when compiling with Clang, which royally messed with the PyRosetta builds. It looks like a small change to the BCL should be able to address this.

• Summary
• linux.clang.bcl.static.build.release
• linux.gcc.bcl.static.build.release

Pull Request №16 RosettaCommons/rosetta/main ← roccomoretti/rosetta/fix_submodule2 Merge: 244726faac3b110193e11bb2c12512deb11b5cb4←9cc8a95cb892e6eeee7ecc8c6c999de9fe6233f8 Attempt to fix the submodule_regression test ---------------- Merge commit message: Use timeout for git fetch.

• Summary

Pull Request №16 RosettaCommons/rosetta/main ← roccomoretti/rosetta/fix_submodule2 Merge: 244726faac3b110193e11bb2c12512deb11b5cb4←5f525f0dec3376b1ea23fa0bb080e6f02164742b Attempt to fix the submodule_regression test ---------------- Merge commit message: Remove remote operations; done by test server.

• Summary

Pull Request №15 RosettaCommons/rosetta/main ← roccomoretti/rosetta/switch_to_bcl_public Merge: a56f3bb97396edf2ddf8f4510ea54b017d3a3e00←6d9c5dfea910616617ed37234a3115147014bab7 Update the BCL to use the most recent version of the public repository. ---------------- Merge commit message: Update to latest BCL, re-run & fix BCL integration to use RosettaCommons/bcl_rosetta

• Summary
• linux.clang.cxx11thread.serialization.python37.PyRosetta.unit
• mac.clang.python38.PyRosetta.unit
• linux.clang.bcl.build.debug
• mac.clang.bcl.build.debug
• linux.clang.bcl.python39.integration.bcl
• integration.mpi 「1」
• integration.release_debug 「2」
• integration 「1」
• scripts.pyrosetta

Pull Request №16 RosettaCommons/rosetta/main ← roccomoretti/rosetta/fix_submodule2 Merge: 244726faac3b110193e11bb2c12512deb11b5cb4←cc4a60d5056e2c129630c6087b908f6b8960585a Attempt to fix the submodule_regression test ---------------- Merge commit message: Merge remote-tracking branch 'origin/main' into fix_submodule2

• Summary
• code_quality.submodule_regression

Pull Request №17 RosettaCommons/rosetta/main ← roccomoretti/rosetta/fix_main_tests Merge: 783d3ed95db62d562267c322db5fdee38229d7a2←0a48f0e642f7d5ce695c7a36b73b08e70f4163cf Fix some currently broken tests. ---------------- Merge commit message: Fix some currently broken tests. There are clang-tidy errors for ImplicitMembraneCoulomb & ImplicitMembraneElecEnergy due to virtual/override. There are running errors for the scientific tests due to a typo I made earlier.

• Summary

Pull Request №16 RosettaCommons/rosetta/main ← roccomoretti/rosetta/fix_submodule2 Merge: 783d3ed95db62d562267c322db5fdee38229d7a2←829d54514bd4fb2c6c9c912d549b8e7ec8cd30c8 Attempt to fix the submodule_regression test ---------------- Merge commit message: Attempt to fix the submodule_regression test A number of submodules are currently failing the submodule_regression test with "NO PRIMARY BRANCH TO TEST!" messages -- this is due to not having the proper origin/main branch to test against. I think this can be fixed by doing a `git fetch` in the submodule after we run a `git submodule sync`, just to make sure the info for the current URL is up-to-date.

• Summary
• code_quality.submodule_regression

Pull Request №15 RosettaCommons/rosetta/main ← roccomoretti/rosetta/switch_to_bcl_public Merge: a56f3bb97396edf2ddf8f4510ea54b017d3a3e00←0de95108ac580a1eb81aacc57fac9cab0baa427f Update the BCL to use the most recent version of the public repository. ---------------- Merge commit message: Update integration test hooks to run the bcl integration tests.

• Summary
• linux.clang.cxx11thread.serialization.python37.PyRosetta.unit
• mac.clang.python38.PyRosetta.unit
• build.ninja_debug
• code_quality.submodule_regression
• integration.bcl
• integration.mpi 「1」
• integration.release_debug 「1」
• integration.tensorflow 「1」
• integration 「1」
• scripts.pyrosetta
• windows.build.debug
• windows.build.release

Pull Request №15 RosettaCommons/rosetta/main ← roccomoretti/rosetta/switch_to_bcl_public Merge: a56f3bb97396edf2ddf8f4510ea54b017d3a3e00←f2c27a06fcee354856bc3aacbc6981d6e3a53dad Update the BCL to use the most recent version of the public repository. ---------------- Merge commit message: Fix merge conflicts

• Summary
• linux.clang.cxx11thread.serialization.python37.PyRosetta.unit
• mac.clang.python38.PyRosetta.unit
• linux.clang.bcl.build.debug
• linux.gcc.bcl.build.debug
• mac.clang.bcl.build.debug
• ubuntu.clang.bcl.build.debug
• ubuntu.gcc.bcl.build.debug
• build.ninja_debug
• integration.mpi 「1」
• integration.release_debug 「2」
• integration 「1」
• scripts.pyrosetta
• windows.build.debug
• windows.build.release

Pull Request №14 RosettaCommons/rosetta/main ← roccomoretti/rosetta/pilot_app_trim Merge: a56f3bb97396edf2ddf8f4510ea54b017d3a3e00←273b3c6c2d5541e01b645c0d72d97db7b5d714ff Clean up pilot apps ---------------- Merge commit message: Clean up pilot apps Especially now that we'll be exposing pilot apps to 'regular' users with the open repo, we probably don't need to be compiling all the pilot apps we are. The general concept here is that if the app isn't tested with an integration test, it probably isn't important enough to be generally compiled. If you're seeing this in the future (e.g. from a git blame) feel free to uncomment any of these apps, but I'd HIGHLY recommend also adding an integration test with a short sample run, to avoid this sort of issue in the future.

• Summary
• integration.mpi 「1」

fixed typo

• Summary

Pull Request №13 RosettaCommons/rosetta/main ← tydingcw/rosetta/b_factor_simple_metric Merge: a56f3bb97396edf2ddf8f4510ea54b017d3a3e00←a7a5495bf824bbd3fb7a8b4e32b286aed1954917 B factor simple metric ---------------- Merge commit message: fixed typo

• Summary
• beautification
• code_quality.submodule_regression
• integration.mpi 「1」
• integration.release_debug 「3」
• integration 「2」

Pull Request №13 RosettaCommons/rosetta/main ← tydingcw/rosetta/b_factor_simple_metric Merge: a56f3bb97396edf2ddf8f4510ea54b017d3a3e00←115930360802117f19c77b40c12fa64f16bd7b11 B factor simple metric ---------------- Merge commit message: added serialization

• Summary
• linux.clang.cxx11thread.serialization.python37.PyRosetta.unit
• linux.gcc.cxx11thread.serialization.build.debug
• mpi.serialization
• beautification
• serialization 「1」
• integration.mpi
• integration.release_debug 「3」
• linux.gcc.cxx11thread.serialization.unit

Pull Request №13 RosettaCommons/rosetta/main ← tydingcw/rosetta/b_factor_simple_metric Merge: a56f3bb97396edf2ddf8f4510ea54b017d3a3e00←638529d44b72bde7ede8619ac8125a328845699f B factor simple metric ---------------- Merge commit message: Added integration test, now checking that atom name exists before getting bfactor

• Summary
• beautification
• serialization 「1」
• code_quality.submodule_regression
• integration.mpi 「1」
• integration.release_debug 「3」
• integration 「2」

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