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branch: master 「№61976」
Commited by: Rhiju Das
GitHub commit link: 「2c586ea176bef82a」 「№6324」
Difference from previous tested commit:  code diff
Commit date: 2023-01-25 15:55:36

Merge pull request #6324 from RosettaCommons/rhiju/swm_revisit_jan2023 hotfix to stepwise monte carlo

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branch: master 「№61975」
Commited by: Ari Benjamin Ginsparg
GitHub commit link: 「a800cb78f0ac3bfb」 「№6323」
Difference from previous tested commit:  code diff
Commit date: 2023-01-23 11:16:42

Merge pull request #6323 from RosettaCommons/ligand_motifs_protocol2 Post-merge fixed to ligand_motifs_protocol2 PR

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branch: master 「№61974」
Commited by: Jack Maguire
GitHub commit link: 「35f325df8b7eab55」 「№6322」
Difference from previous tested commit:  code diff
Commit date: 2023-01-18 17:04:22

Merge pull request #6322 from RosettaCommons/JackMaguire/noemail Removing my email address from doxygen briefs before going open

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branch: master 「№61973」
Commited by: Sergey Lyskov
GitHub commit link: 「1e90b58800192841」 「№6321」
Difference from previous tested commit:  code diff
Commit date: 2023-01-18 16:55:03

Merge pull request #6321 from RosettaCommons/sergey/binder updating Binder and fixing PyRosetta build

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branch: master 「№61972」
Commited by: Ari Benjamin Ginsparg
GitHub commit link: 「7c4a85949f8221bd」 「№6317」
Difference from previous tested commit:  code diff
Commit date: 2023-01-18 12:03:04

Merge pull request #6317 from RosettaCommons/ligand_motifs_protocol2 This merge introduces protocols/motifs/IdentifyLigandMotifs.cc/hh and a public app to use it apps/public/motif_ligand_discovery/identify_ligand_motifs.cc. This protocol allows the user to collect motifs from a protein-ligand system.

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branch: master 「№61971」
Commited by: Sergey Lyskov
GitHub commit link: 「4bdfac92d43cb6fd」
Difference from previous tested commit:  code diff
Commit date: 2023-01-17 13:42:56

dummy commit to trigger test run

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branch: master 「№61970」
Commited by: Ari Benjamin Ginsparg
GitHub commit link: 「201d7639f91f369d」 「№6306」
Difference from previous tested commit:  code diff
Commit date: 2022-12-07 17:15:33

Merge pull request #6306 from RosettaCommons/LDM_fix Fix to my previous merge that threw errors on post0merge tests. Also addresses an issue introduced in protocols/ligand_docking/HighResDocker.cc where a variable was erroneously initially declared as true (and should have been false).

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branch: master 「№61969」
Commited by: Guangfeng Zhou
GitHub commit link: 「1543fb77d1296876」 「№6307」
Difference from previous tested commit:  code diff
Commit date: 2022-12-05 12:58:43

Merge pull request #6307 from RosettaCommons/guangfeng/galiganddock_bugfix Fixed a bug for multires ligand docking

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branch: master 「№61968」
Commited by: Ari Benjamin Ginsparg
GitHub commit link: 「32909a2488c9eccb」 「№6111」
Difference from previous tested commit:  code diff
Commit date: 2022-11-30 11:03:03

Merge pull request #6111 from RosettaCommons/LigandDiscoveryMerge Merging in new protocol for motifs-based ligand docking in main/source/src/protocols/motifs/LigandDiscoverySearch.cc. Public app to run the script located in main/source/src/apps/public/motif_ligand_discovery/ligand_discovery_search_protocol.cc. Integration test that uses the app with the protocol found at main/tests/integration/tests/ligand_motif_discovery.

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branch: master 「№61967」
Commited by: Rhiju Das
GitHub commit link: 「d2aee95a6b7bf6ee」 「№6295」
Difference from previous tested commit:  code diff
Commit date: 2022-11-23 16:33:36

Merge pull request #6295 from RosettaCommons/rhiju/no_reload_rna_suite_potential use ScoringManager to prevent re-loading lots of copies of rna_suite_potential in RNA_SuiteEnergy.cc

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branch: master 「№61966」
Commited by: Sergey Lyskov
GitHub commit link: 「38399f611a5e4636」
Difference from previous tested commit:  code diff
Commit date: 2022-11-18 19:29:46

increasing PyRosetta unit tests timeouts on AARCH64

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branch: master 「№61965」
Commited by: Sergey Lyskov
GitHub commit link: 「6288c6abd90c8bd9」
Difference from previous tested commit:  code diff
Commit date: 2022-11-16 13:00:52

increasing PyRosetta unit tests timeouts on AARCH64

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branch: master 「№61964」
Commited by: Rocco Moretti
GitHub commit link: 「f0c6fca0e2fae270」 「№6297」
Difference from previous tested commit:  code diff
Commit date: 2022-11-16 12:41:29

Merge pull request #6297 from RosettaCommons/roccomoretti/fix_master Fix broken tests in master. Fix a number of broken tests in master.

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branch: master 「№61963」
Commited by: Kevin Drew
GitHub commit link: 「de16a55b0dc5944b」 「№6294」
Difference from previous tested commit:  code diff
Commit date: 2022-11-15 11:18:37

Merge pull request #6294 from RosettaCommons/ksdrew/cmaes_seed_bugfix Fix bug with how seed is set in CMAES init

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branch: master 「№61962」
Commited by: Ameya Harmalkar
GitHub commit link: 「5cc00f57500f094f」 「№6132」
Difference from previous tested commit:  code diff
Commit date: 2022-11-13 16:57:50

Merge pull request #6132 from RosettaCommons/AmeyaHarmalkar/MixedMonteCarloMover Add a MixedMonteCarlo Mover in Rosetta for ResolutionExchange

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branch: master 「№61961」
Commited by: Guangfeng Zhou
GitHub commit link: 「f324497aee89485b」 「№6004」
Difference from previous tested commit:  code diff
Commit date: 2022-11-10 18:03:26

Merge pull request #6004 from RosettaCommons/guangfeng/galiganddock_update2 Bugfixes

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