Pushed Revisions

branch: master 「№61288」
Commited by: Andy Watkins
GitHub commit link: 「e5f9e998efdb2d32」「№4689」
Difference from previous tested commit: code diff
Commit date: 2020-05-25 19:34:11

Merge pull request #4689 from RosettaCommons/everyday847/reimagine_rna getting RNA protocols off their island

branch: master 「№61287」
Commited by: Andy Watkins
GitHub commit link: 「122f5c958a089e6b」「№4723」
Difference from previous tested commit: code diff
Commit date: 2020-05-24 16:08:11

Merge pull request #4723 from RosettaCommons/everyday847/rna_cluster_show_n_clusters rna_cluster: Show number of resulting clusters

branch: master 「№61286」
Commited by: Bobby Langan
GitHub commit link: 「c3272bc12863b00a」「№4722」
Difference from previous tested commit: code diff
Commit date: 2020-05-20 21:57:50

Merge pull request #4722 from RosettaCommons/BobbyLangan/remove-python-prints Changing python print() to logging.info() in h5_fragment_store

branch: master 「№61285」
Commited by: Diego del Alamo
GitHub commit link: 「29e67ca8330a882f」「№4720」
Difference from previous tested commit: code diff
Commit date: 2020-05-20 17:43:14

Merge pull request #4720 from RosettaCommons/epr_deer_clangtidy_fix Minor quality edits to EPR code (clangtidy)

branch: master 「№61284」
Commited by: Rocco Moretti
GitHub commit link: 「cb360c57ed4ba63d」「№4716」
Difference from previous tested commit: code diff
Commit date: 2020-05-20 12:59:13

Merge pull request #4716 from RosettaCommons/roccomoretti/master_fixes Handful of fixes to the integration tests. There were some minor issue with various integration tests which were leading to test "breakage" in master on the test server. Address these.

branch: master 「№61283」
Commited by: Teun Hoevenaars
GitHub commit link: 「312d3c746a5d4176」「№4707」
Difference from previous tested commit: code diff
Commit date: 2020-05-19 11:08:20

Merge pull request #4707 from RosettaCommons/teunhoevenaars/loopmodel_min_refiner_chi fix set_chi bug in MinimizationRefiner

branch: master 「№61282」
Commited by: Jack Maguire
GitHub commit link: 「9085d7abc1f4f3b1」「№4711」
Difference from previous tested commit: code diff
Commit date: 2020-05-18 21:21:49

Merge pull request #4711 from RosettaCommons/JackMaguire/Fix Multistage XML bug @jadolfbr caught this mistake in the MRS XML over the weekend. Lazy copy/pasting on my part. Thanks Jared!

branch: master 「№61281」
Commited by: Vikram K. Mulligan
GitHub commit link: 「e15db9dfea7768d5」
Difference from previous tested commit: code diff
Commit date: 2020-05-18 17:25:40

branch: master 「№61280」
Commited by: Vikram K. Mulligan
GitHub commit link: 「64d08bbfc5fc178d」「№4698」
Difference from previous tested commit: code diff
Commit date: 2020-05-18 13:26:56

Merge pull request #4698 from RosettaCommons/vmullig/tweak_simple_cycpep_predict_sci_test_threshold Tweak thresholds on simple_cycpep_predict scientific test a bit. The recent weak to the Dunbrack libraries seems to have made simple_cycpep_predict a little bit slower (less than 10%). As such, the simple_cycpep_predict scientific test frequently fails just because it isn't sampling as much as expected. This PR relaxes the sampling threshold just a bit, since I think we'll just have to accept the slight slowdown.

branch: master 「№61279」
Commited by: Jeliazko Jeliazkov
GitHub commit link: 「3affa540053198df」「№4632」
Difference from previous tested commit: code diff
Commit date: 2020-05-17 10:56:12

Merge pull request #4632 from RosettaCommons/lqtza/RAb_blast_filter_updates RAb and SD Filter/Option Updates

branch: master 「№61278」
Commited by: Brian Weitzner
GitHub commit link: 「b32ceb649fe213b8」「№4705」
Difference from previous tested commit: code diff
Commit date: 2020-05-15 21:58:17

Merge pull request #4705 from RosettaCommons/weitzner/pose-bindings-hotfix Add missing `numpy` imports

branch: master 「№61277」
Commited by: Daniel Farrell
GitHub commit link: 「fb07838599362f9b」「№4683」
Difference from previous tested commit: code diff
Commit date: 2020-05-14 14:01:53

Merge pull request #4683 from RosettaCommons/danpf/fix_es_int_test update loop_grower_N_term_symm integration test

branch: master 「№61276」
Commited by: Sergey Lyskov
GitHub commit link: 「c522e9e9054813e6」「№4697」
Difference from previous tested commit: code diff
Commit date: 2020-05-14 12:55:54

Merge pull request #4697 from RosettaCommons/revert-4687-klimaj/distributed_logging Revert "Small fixes to pyrosetta.distributed logging" (was #4687)

branch: master 「№61275」
Commited by: Jack Maguire
GitHub commit link: 「cf2ae46593191e96」「№4694」
Difference from previous tested commit: code diff
Commit date: 2020-05-14 10:15:25

Merge pull request #4694 from RosettaCommons/JackMaguire/FixExtrasEverything Fixing compiler errors in clang-10.clang.cxx11thread.mpi.serialization.tensorflow.build.debug Thanks Rocco!

branch: master 「№61274」
Commited by: Jack Maguire
GitHub commit link: 「e2350dd0f620a514」「№4696」
Difference from previous tested commit: code diff
Commit date: 2020-05-13 17:08:54

Merge pull request #4696 from RosettaCommons/JackMaguire/FixOtherTests Denoisifying the smart annealer integration test. This seems to work - thanks for the review Rocco!

branch: master 「№61273」
Commited by: Frank DiMaio
GitHub commit link: 「6a0c75187100c700」「№4695」
Difference from previous tested commit: code diff
Commit date: 2020-05-13 14:19:16

Merge pull request #4695 from RosettaCommons/dimaio/gcc74_fix Fix maybe-uninitialized bug with gcc7.4

Legend:

queued	Queued Test
queued for comparison	Test finished running but not yet compared
running	Test is Running right now
comparing	Test results is now comparing with previous results
finished	Test is finished without errors
failed	Test failed
build Failed	Test could not be run because build failed
script failed	Test results is unknow because test-script failed
canceled	Test was canceled