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branch: benchmark 「№278」
Commited by: Sergey Lyskov
GitHub commit link: 「5659369fcbcef33d」
Difference from previous tested commit:  code diff
Commit date: 2017-09-08 15:20:46

Updating parallel.py so it could be used as library. Adding rosetta_scripts_scripts submodule.

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branch: benchmark 「№277」
Commited by: Sergey Lyskov
GitHub commit link: 「d8cbfbdb8668287a」
Difference from previous tested commit:  code diff
Commit date: 2017-08-27 13:37:15

fixing app_function2 test

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branch: benchmark 「№276」
Commited by: Sergey Lyskov
GitHub commit link: 「24753a6b042f6752」
Difference from previous tested commit:  code diff
Commit date: 2017-08-26 17:11:08

Adding log-key for passed sub-tests

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branch: benchmark 「№275」
Commited by: Sergey Lyskov
GitHub commit link: 「6e2103ec94cd87db」
Difference from previous tested commit:  code diff
Commit date: 2017-08-26 14:28:27

Switching py.test to use JSON API

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branch: benchmark 「№274」
Commited by: Sergey Lyskov
GitHub commit link: 「705b3a8e2bf0aef9」
Difference from previous tested commit:  code diff
Commit date: 2017-08-26 12:10:47

fixing run_pyrosetta_test

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branch: benchmark 「№273」
Commited by: Sergey Lyskov
GitHub commit link: 「0634a774604ecc33」
Difference from previous tested commit:  code diff
Commit date: 2017-08-25 21:42:41

Adding 'scripts' benchmark-script for testing Rosetta/PyRosetta scripts submodules. Adding pyrosetta_scripts submodule.

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branch: benchmark 「№272」
Commited by: Sergey Lyskov
GitHub commit link: 「0ddf0a8af1786492」
Difference from previous tested commit:  code diff
Commit date: 2017-08-24 16:10:48

Updating configuration option for Python-2.7 on Ubuntu

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branch: benchmark 「№271」
Commited by: Sergey Lyskov
GitHub commit link: 「c202122fac60902b」
Difference from previous tested commit:  code diff
Commit date: 2017-08-19 13:20:47

Fixing source/tools/build/site.settings.release. @roccomoretti could you please check if these changes is ok with you?

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branch: benchmark 「№270」
Commited by: Sergey Lyskov
GitHub commit link: 「fa22e751847fa037」
Difference from previous tested commit:  code diff
Commit date: 2017-08-17 21:15:18

Adding more fields to '.release.json'. Refactoring version.py to use release marker if found.

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branch: benchmark 「№269」
Commited by: Sergey Lyskov
GitHub commit link: 「276230d151d76ca3」
Difference from previous tested commit:  code diff
Commit date: 2017-08-17 18:39:48

Refactoring release script so it add appropriate Binder revision into release package and also mark 'release' revisions with `.release.json`. Refactoring PyRosetta build script so do not try to checkout Binder submodule if release package is detected. Updating `build` test documentation, adding explanation for common platforms.

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branch: benchmark 「№268」
Commited by: Danny Farrell
GitHub commit link: 「bd5f76db16ffa9ae」
Difference from previous tested commit:  code diff
Commit date: 2017-08-16 20:39:18

Fixed PyRosetta build error When compiling PyRosetta you could sometimes fail due to this error: /suppscr/dimaio/danpf/git/Rosetta/master/source/src/protocols/floppy_tail/FloppyTailMover.cc:371:32: error: default initialization of an object of const type 'const std::set<core::Size>' (aka 'const set<unsigned long>') without a user-provided default constructor std::set < core::Size > const empty; //easier to add empty sets to the vector than construct-then-add This commit fixes that.

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branch: benchmark 「№267」
Commited by: Sergey Lyskov
GitHub commit link: 「2d218bf124046c63」
Difference from previous tested commit:  code diff
Commit date: 2017-07-26 14:44:36

Adding extra constraint to Condor HPC driver so profile/performance jobs will only be routed to particular nodes. This should solve instability issues that we observed lately.

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branch: benchmark 「№266」
Commited by: Brian Weitzner
GitHub commit link: 「a5912fb039f00383」
Difference from previous tested commit:  code diff
Commit date: 2017-07-25 20:59:43

Update reorder_chains.py Now with support for gzipped files (input and output). Just give the script filename ending with .pdb.gz and it (the script) will do the rest.

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branch: benchmark 「№265」
Commited by: Vikram K. Mulligan
GitHub commit link: 「b7f55a05be40f101」 「№2145」
Difference from previous tested commit:  code diff
Commit date: 2017-05-31 01:55:07

Merge pull request #2145 from RosettaCommons/vmullig/correct_xsd_info Correct some XSD information I've seen a few instances of incorrect descriptions in XSD stuff. This pull request corrects some of that.

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branch: benchmark 「№264」
Commited by: Sergey Lyskov
GitHub commit link: 「fcb89ac9ab30f447」
Difference from previous tested commit:  code diff
Commit date: 2017-05-30 14:46:50

Updating Context::sort_binders so it print clear error message and exit instead of throwing the exception.

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branch: benchmark 「№263」
Commited by: Sergey Lyskov
GitHub commit link: 「ea8af99eb179dbe8」 「№2282」
Difference from previous tested commit:  code diff
Commit date: 2017-05-24 17:39:14

Merge pull request #2282 from RosettaCommons/sergey/f Updating PyMOLMover so UDP address and port could be set from XML scripts

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