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branch: master 「№60392」
Commited by: Brian Coventry
GitHub commit link: 「6451916311cc3abf」 「№3452」
Difference from previous tested commit:  code diff
Commit date: 2018-09-10 16:04:31

Merge pull request #3452 from RosettaCommons/bcov/MoveRotamerSets Move RotamerSetsBase from core/pack/pack_rotamers to core/pose

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branch: master 「№60391」
Commited by: Steven Lewis
GitHub commit link: 「4971e924ce60bb4f」 「№3456」
Difference from previous tested commit:  code diff
Commit date: 2018-09-10 15:04:59

Merge pull request #3456 from RosettaCommons/smlewis/rosetta_options_dot_why rosetta_options.why

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branch: master 「№60390」
Commited by: Jared Adolf-Bryfogle
GitHub commit link: 「2376c8a73af3b9b9」 「№3227」
Difference from previous tested commit:  code diff
Commit date: 2018-09-10 13:08:06

Merge pull request #3227 from RosettaCommons/jadolfbr/simple_graft_movers Fix simple graft mover XSDs This fixes ReplaceRegionMover's XSD and RS interface which was broken after the XRW. This also fixes InsertPoseIntoPoseMover, and updates the XSD documentation. Add an integration test for the RS interface (the core code is unit-tested)

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branch: master 「№60389」
Commited by: Brian Coventry
GitHub commit link: 「531def18639be99b」 「№3454」
Difference from previous tested commit:  code diff
Commit date: 2018-09-10 11:56:49

Merge pull request #3454 from RosettaCommons/bcov/ApproxHBondStuff Performance related addition to AtomLevelHBondGraph

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branch: master 「№60388」
Commited by: Jared Adolf-Bryfogle
GitHub commit link: 「303b63412a08f031」 「№3462」
Difference from previous tested commit:  code diff
Commit date: 2018-09-10 11:55:39

Merge pull request #3462 from RosettaCommons/jadolfbr/design_profile_test Profile design without probabilities This PR adds an option to do antibody design using profiles, but without AA probabilities (other than 0). This can increase variability in designs and its being used to make the unit tests deterministic.

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branch: master 「№60387」
Commited by: longxing
GitHub commit link: 「e62e50409b1b2d83」 「№3457」
Difference from previous tested commit:  code diff
Commit date: 2018-09-07 14:46:30

Merge pull request #3457 from RosettaCommons/longxing/hotspots Add specific label for each hotspot in the motifgraft mover

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branch: master 「№60386」
Commited by: Alex Ford
GitHub commit link: 「0bac2147dade58da」 「№3455」
Difference from previous tested commit:  code diff
Commit date: 2018-09-07 14:39:33

Merge pull request #3455 from RosettaCommons/fordas/buildkite_tagged_builds Update buildkite hooks for tag targets.

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branch: master 「№60385」
Commited by: Brian Coventry
GitHub commit link: 「bfff0b7f9c51b0d1」 「№3453」
Difference from previous tested commit:  code diff
Commit date: 2018-09-07 13:58:43

Merge pull request #3453 from RosettaCommons/bcov/AtomicDepthTweaks AtomicDepth: Changed scale factor to resolution

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branch: master 「№60384」
Commited by: Sergey Lyskov
GitHub commit link: 「31f47f338a2559db」 「№3411」
Difference from previous tested commit:  code diff
Commit date: 2018-09-07 12:41:42

Merge pull request #3411 from RosettaCommons/sergey/scientific Adding blueprint for step-by-step scientific tests, adding relax tests prototypes

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branch: master 「№60383」
Commited by: Brian Weitzner
GitHub commit link: 「d34a046333265b24」 「№3449」
Difference from previous tested commit:  code diff
Commit date: 2018-09-07 08:29:59

Merge pull request #3449 from RosettaCommons/weitzner/pyrosetta_clean_init Clean up the pyrosetta __init__

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branch: master 「№60382」
Commited by: Sergey Lyskov
GitHub commit link: 「5837139b99e4df81」 「№3450」
Difference from previous tested commit:  code diff
Commit date: 2018-09-06 19:37:21

Merge pull request #3450 from RosettaCommons/sergey/binder updating Binder submodule

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branch: master 「№60381」
Commited by: Jack Maguire
GitHub commit link: 「8acfef923fe0a0c7」
Difference from previous tested commit:  code diff
Commit date: 2018-09-06 18:08:31

Adding a residue selector that applies to native poses I'm adding a residue selector that wraps around another residue selector and applies it to the native pose instead of the given pose. You can read more about it here: https://www.rosettacommons.org/docs/latest/scripting_documentation/RosettaScripts/ResidueSelectors/ResidueSelectors#other_nativeselector Thanks to @jadolfbr for the review and @roccomoretti for tips/comments

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branch: master 「№60380」
Commited by: Sergey Lyskov
GitHub commit link: 「51cbad3fa0a99da0」
Difference from previous tested commit:  code diff
Commit date: 2018-09-05 19:07:46

triggering clean rebuild

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branch: master 「№60379」
Commited by: Brian Weitzner
GitHub commit link: 「2c6f16738e4cd1bf」 「№3442」
Difference from previous tested commit:  code diff
Commit date: 2018-09-05 12:31:25

Merge pull request #3442 from RosettaCommons/weitzner/clean_pyrosetta_toolbox clean pyrosetta toolbox

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branch: master 「№60378」
Commited by: Jack Maguire
GitHub commit link: 「29885ce3fbc78fbf」
Difference from previous tested commit:  code diff
Commit date: 2018-09-04 18:57:15

Trivial change to some Residue functions There are two-dozen functions in conformation::Residue that take an int and pass it to an equivalent method in chemical::ResidueType. The ResidueType functions take a Size instead of an int, so I am updating the Residue functions to take the same type. Thanks to @lyskov for the review!

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branch: master 「№60377」
Commited by: Sergey Lyskov
GitHub commit link: 「dd8ad33baabe5426」 「№3441」
Difference from previous tested commit:  code diff
Commit date: 2018-09-02 19:41:46

Merge pull request #3441 from RosettaCommons/sergey/binder Updating Binder, adding support for variadic templates.

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