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branch: master 「№58548」
Commited by: Andrew Watkins
GitHub commit link: 「e0c92d8b8bec711e」
Difference from previous tested commit:  code diff
Commit date: 2016-03-12 15:13:18

Accidentally broke unit test build; sorry

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branch: master 「№58547」
Commited by: Andrew Watkins
GitHub commit link: 「be890a9da1a7c2fb」 「№1175」
Difference from previous tested commit:  code diff
Commit date: 2016-03-12 14:52:51

Merge pull request #1175 from RosettaCommons/talaris2014_default Set talaris2014 as default scoring function

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branch: master 「№58546」
Commited by: Steve Bertolani
GitHub commit link: 「bec6bae3640ab4f9」 「№1160」
Difference from previous tested commit:  code diff
Commit date: 2016-03-12 13:24:08

Merge pull request #1160 from RosettaCommons/sjbertolani/unrecognized_atom_record_in_pyrosetta This adds a python wrapper for the std:vector< core::pose::UnrecognizedAtomRecords> container. You can now access the data and iterate on the container in pyrosetta. No test changes expected.

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branch: master 「№58545」
Commited by: Andrew Watkins
GitHub commit link: 「a9fef9aed8c32a69」 「№1177」
Difference from previous tested commit:  code diff
Commit date: 2016-03-11 16:30:13

Merge pull request #1177 from RosettaCommons/remove_cc_includes No more .cc includes (anywhere but, potentially, pilot apps). Integration test changes are only the Known Bad Changers. No issues elsewhere.

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branch: master 「№58544」
Commited by: Vikram K. Mulligan
GitHub commit link: 「4becdbee2101f074」 「№1174」
Difference from previous tested commit:  code diff
Commit date: 2016-03-11 16:12:42

Merge pull request #1174 from RosettaCommons/vmullig/genkic_tweaks Tweaking GenKIC defaults to avoid memory issue Changing default closure_attempts for GenKIC to 100 (from 2000). Users reported memory issues with default settings.

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branch: master 「№58543」
Commited by: Tom Linsky
GitHub commit link: 「3eb2837039425dec」 「№1171」
Difference from previous tested commit:  code diff
Commit date: 2016-03-11 12:56:12

Merge pull request #1171 from RosettaCommons/tlinsky/constraint_generator Add ConstraintGenerator base class Integration test changes expected for inverse_rotamer_remodel and pna integration tests due to different tracer output (because a class name changed)

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branch: master 「№58542」
Commited by: Vikram K. Mulligan
GitHub commit link: 「093e71a1bc2872d8」 「№1173」
Difference from previous tested commit:  code diff
Commit date: 2016-03-11 11:37:25

Merge pull request #1173 from RosettaCommons/vmullig/fix_irritating_error_message Fix "false" error messages in GenericMonteCarlo mover. The GenericMonteCarlo mover throws an error message that only reads, "false", if the user provides certain bad inputs. This is completely non-informative. This fixes that.

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branch: master 「№58541」
Commited by: Frank DiMaio
GitHub commit link: 「412581f296e79f9c」 「№1172」
Difference from previous tested commit:  code diff
Commit date: 2016-03-10 17:40:13

Merge pull request #1172 from RosettaCommons/dimaio/lkb_trie_v_trie_bugfixes Two minor bugfixes for trie-vs-trie scoring with lk-ball.

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branch: master 「№58540」
Commited by: Tom Linsky
GitHub commit link: 「aede021688fe1d9b」 「№1170」
Difference from previous tested commit:  code diff
Commit date: 2016-03-09 21:06:37

Merge pull request #1170 from RosettaCommons/tlinsky/ss_selector_xml_option Change name of 'dssp' xml option in SecondaryStructure selector

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branch: master 「№58539」
Commited by: Tom Linsky
GitHub commit link: 「25d18d039c296f6c」 「№1163」
Difference from previous tested commit:  code diff
Commit date: 2016-03-09 21:05:33

Merge pull request #1163 from RosettaCommons/tlinsky/matcher_resselector Improved residue selector usage in MatcherMover

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branch: master 「№58538」
Commited by: Frank DiMaio
GitHub commit link: 「a8d45b2c71c5233c」 「№1167」
Difference from previous tested commit:  code diff
Commit date: 2016-03-09 13:21:43

Merge pull request #1167 from RosettaCommons/dimaio/SymmInfo_bugfix Fixing a long-standing bug in the intra-subunit remapping logic in SymmetryInfo::update_nmonomer_jumps.

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branch: master 「№58537」
Commited by: Vikram K. Mulligan
GitHub commit link: 「9c4389d3cb09d9ab」
Difference from previous tested commit:  code diff
Commit date: 2016-03-09 13:03:38

Another mistake in pilot app fixed.

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branch: master 「№58536」
Commited by: Vikram K. Mulligan
GitHub commit link: 「a16337e2111b79fc」
Difference from previous tested commit:  code diff
Commit date: 2016-03-09 12:53:50

Adding some options to a pilot app. No test changes expected (or possible).

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branch: master 「№58535」
Commited by: Vikram K. Mulligan
GitHub commit link: 「334dba6e140730c5」
Difference from previous tested commit:  code diff
Commit date: 2016-03-08 21:34:00

Tweaking a pilot app.

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branch: master 「№58534」
Commited by: Tom Linsky
GitHub commit link: 「f8e96f43603eb1c5」 「№1159」
Difference from previous tested commit:  code diff
Commit date: 2016-03-08 18:42:39

Merge pull request #1159 from RosettaCommons/tlinsky/reg_primary_sequence_neighborhood_selector Add missing registrator for PrimarySequenceNeighborhood residue selector

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branch: master 「№58533」
Commited by: Tom Linsky
GitHub commit link: 「7f4ba121fd9cc155」 「№1149」
Difference from previous tested commit:  code diff
Commit date: 2016-03-08 16:07:29

Merge pull request #1149 from RosettaCommons/tlinsky/removeresidues_selector Add residue selector support to DeleteRegionMover

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