Pushed Revisions

branch: RFdiffusion:commits 「№22」
Commited by: Rocco Moretti
GitHub Pull Request link: 「№233」
Merge: 「820bfdfad」← 「25d250b0d」 code diff
Scheduled at: 2024-04-26 17:07:00.945420

Pull Request №233 RosettaCommons/RFdiffusion/main ← roccomoretti/RFdiffusion/roccomoretti-contig_sample_detail Merge: 820bfdfaded8c260b962dc40a3171eae316b6ce0←25d250b0d09e709f6106d387dd12e3d9086181df Add information about sampled contig ---------------- Merge commit message: Add information about sampled contig In addition to the general contig specification which is being used for the generation, it would also be helpful to monitor what the actual randomly sampled contig is. I believe this change does that: ``` [2024-04-26 13:29:13,350][rfdiffusion.inference.model_runners][INFO] - Using contig: ['10-100/A1083-1083/10-100/A1051-1051/10-100/A1180-1180/10-100'] [2024-04-26 13:29:13,351][rfdiffusion.inference.model_runners][INFO] - Sampled contig: ['53-53/A1083-1083/100-100/A1051-1051/86-86/A1180-1180/22-22'] ```

branch: RFdiffusion:commits 「№21」
Commited by: Junior Martins
GitHub Pull Request link: 「№229」
Merge: 「820bfdfad」← 「8bd29e83d」 code diff
Scheduled at: 2024-04-25 00:14:57.187677

Pull Request №229 RosettaCommons/RFdiffusion/main ← jrom99/RFdiffusion/main Merge: 820bfdfaded8c260b962dc40a3171eae316b6ce0←8bd29e83ddde4a668d2fc6299b6595e38ec00d1b Allow manually setting device name (CUDA/CPU) ---------------- Merge commit message: Add ability to control seed value in deterministic runs

branch: RFdiffusion:commits 「№20」
Commited by: Junior Martins
GitHub Pull Request link: 「№229」
Merge: 「820bfdfad」← 「bb0131247」 code diff
Scheduled at: 2024-04-22 17:19:56.302632

Pull Request №229 RosettaCommons/RFdiffusion/main ← jrom99/RFdiffusion/main Merge: 820bfdfaded8c260b962dc40a3171eae316b6ce0←bb01312473611c9cab00158f545c559db89ad988 Allow manually setting device name (CUDA/CPU) ---------------- Merge commit message: Add config schema type hints

branch: RFdiffusion:commits 「№19」
Commited by: patriksimurka
GitHub Pull Request link: 「№168」
Merge: 「820bfdfad」← 「98dc1539a」 code diff
Scheduled at: 2023-12-07 14:03:59.314090

Pull Request №168 RosettaCommons/RFdiffusion/main ← patriksimurka/RFdiffusion/main Merge: 820bfdfaded8c260b962dc40a3171eae316b6ce0←98dc1539a67b5c9552bd8d42986e160aa5cf031d Fix symmetric oligomer example bug in readme ---------------- Merge commit message: Fix symmetric oligomer example bug in readme

branch: RFdiffusion:commits 「№18」
Commited by: Fatboy
GitHub Pull Request link: 「№156」
Merge: 「820bfdfad」← 「8fa27c861」 code diff
Scheduled at: 2023-11-15 09:27:21.641948

Pull Request №156 main←patch-1 Merge: 820bfdfaded8c260b962dc40a3171eae316b6ce0←8fa27c861c5a7cbf8740cc911c9ff71316a9e151 Update SE3nv.yml ---------------- Merge commit message: Update SE3nv.yml Pytorch-gpu is needed instead of pytorch. It will pull the dependencies on its own.

Pull Request №136 main←joewatchwell-patch-1 Merge: 46c0ef6803df475b10ebe0a9b5cf490002fda7b0←22584a2a7d64e919883f674037b886e269737d7f Update LICENSE ---------------- Merge commit message: Update LICENSE

branch: RFdiffusion:commits 「№16」
Commited by: Joseph Watson
GitHub Pull Request link: 「№126」
Merge: 「46c0ef680」← 「c68e28db2」 code diff
Scheduled at: 2023-09-13 20:17:55.801136

Pull Request №126 main←JW_PR2 Merge: 46c0ef6803df475b10ebe0a9b5cf490002fda7b0←c68e28db2278627ac0d5886e2337e9f6f801bb9d Updated README ---------------- Merge commit message: Updated README

branch: RFdiffusion:commits 「№15」
Commited by: Joseph Watson
GitHub Pull Request link: 「№125」
Merge: 「ba8446eae」← 「7bdc90c9b」 code diff
Scheduled at: 2023-09-13 19:32:06.917082

Pull Request №125 main←JW_PR2 Merge: ba8446eae0fb80c121829a67d3464772cc827f01←7bdc90c9b7b3a251119bfac8a632d7d219022701 Implemented inpaint_str and added example ---------------- Merge commit message: Implemented inpaint_str and added example

branch: RFdiffusion:commits 「№14」
Commited by: Javier Castellanos
GitHub Pull Request link: 「№117」
Merge: 「ba8446eae」← 「c5877f3ff」 code diff
Scheduled at: 2023-09-01 02:02:41.347148

Pull Request №117 main←dockerfile-conda Merge: ba8446eae0fb80c121829a67d3464772cc827f01←c5877f3ffb1d34476c423e4da666326d19186e90 Update Dockerfile to use conda ---------------- Merge commit message: added linker path for singularity

branch: RFdiffusion:commits 「№13」
Commited by: Javier Castellanos
GitHub Pull Request link: 「№117」
Merge: 「ba8446eae」← 「013de05eb」 code diff
Scheduled at: 2023-08-31 18:15:20.559108

Pull Request №117 main←dockerfile-conda Merge: ba8446eae0fb80c121829a67d3464772cc827f01←013de05eb76554cfd8e9391fb762e435da3de106 Update Dockerfile to use conda ---------------- Merge commit message: Update Dockerfile to use conda

branch: RFdiffusion:commits 「№12」
Commited by: Joseph Watson
GitHub Pull Request link: 「№96」
Merge: 「9149e5395」← 「c9ba72d90」 code diff
Scheduled at: 2023-07-25 13:36:42.479140

Pull Request №96 main←JW_PR Merge: 9149e5395a33e8b365782b34a91c09e0f29e8117←c9ba72d90fb5614d81ed122429563927aa9af932 Added p53 scaffolding example ---------------- Merge commit message: Added input pdb for p53 case

branch: RFdiffusion:commits 「№11」
Commited by: Javier Castellanos
GitHub Pull Request link: 「№90」
Merge: 「5606075d4」← 「c7de35b4d」 code diff
Scheduled at: 2023-07-20 18:31:30.336397

Pull Request №90 main←patch-1 Merge: 5606075d45bd23aa60785024b203ed6b0f6d2cd0←c7de35b4d3948e8e5b5c6d62a7991a1ad3f9293c Fixed incorrect variable name in contig parsing ---------------- Merge commit message: Fixed incorrect variable name in contig parsing

branch: RFdiffusion:commits 「№10」
Commited by: Sergey Lyskov
GitHub Pull Request link: 「№83」
Merge: 「9da13dc5b」← 「a29ac4da8」 code diff
Scheduled at: 2023-06-27 15:49:35.005203

Pull Request №83 main←sergey/fixing_design_ppi_scaffolded_test Merge: 9da13dc5b37eb2eb52593cc0d318c8937cdcf0f7←a29ac4da85bf238a2c43858a04fcc7e4335e1969 updating rosetta-ci scripts to fix design_ppi_scaffolded test ---------------- Merge commit message: updating rosetta-ci test script, adding unpacking ppi scaffolds

branch: RFdiffusion:commits 「№9」
Commited by: Sergey Lyskov
GitHub Pull Request link: 「№82」
Merge: 「9da13dc5b」← 「19400c6fd」 code diff
Scheduled at: 2023-06-27 15:17:33.696515

Pull Request №82 main←benchmark Merge: 9da13dc5b37eb2eb52593cc0d318c8937cdcf0f7←19400c6fddfe0a1ed5bd8d58dbf6a0ea46942bf3 updating rosetta-ci scripts to fix design_ppi_scaffolded test ---------------- Merge commit message: Merge remote-tracking branch 'origin/main' into benchmark

branch: RFdiffusion:commits 「№8」
Commited by: Rocco Moretti
GitHub Pull Request link: 「№81」
Merge: 「b4f4c264a」← 「c51bc053d」 code diff
Scheduled at: 2023-06-27 11:27:01.318896

Pull Request №81 main←roccomoretti/model_dir Merge: b4f4c264a7256ae8e90182fb60f51edcf331dbff←c51bc053d54c990dedb481dbae91c91750dd922d Update install instructions for model directory location. ---------------- Merge commit message: Update install instructions for model directory location. Be more specific about the location of the models directory. Addresses issue #80

branch: RFdiffusion:commits 「№7」
Commited by: Nick Randolph
GitHub Pull Request link: 「№72」
Merge: 「25e9cda15」← 「c442cde75」 code diff
Scheduled at: 2023-06-12 21:59:33.257482

Pull Request №72 main←arg_swap Merge: 25e9cda1546a0df850700256d9b9304415602c3a←c442cde754b6ff4703c993666d76925240d29609 Swapped arguments when creating SymGen ---------------- Merge commit message: Fixed model_only_neighbors typo

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