run_multi_step_test for mp_f19_decoy_discrimination failed while running 2.analyze.py...Aborting!
Running 2.analyze.py...
Command line: cd /home/benchmark/w/rosetta-2.hpc-b/T/main-62109.828715.ubuntu-20.04.clang.python36.scientific.mp_f19_decoy_discrimination.0 && unset __PYVENV_LAUNCHER__ && . /home/benchmark/w/rosetta-2.hpc-b/prefix/ubuntu-20.04/rosetta-2/ubuntu-20.04/python_virtual_environments/python-3.6/262fdc7a14abf110eabe39a6a19bf0fe/bin/activate && python 2.analyze.py
Loaded variables from 1.submit.output.json: dict_keys(['debug', 'extension', 'nstruct', 'rosetta_dir', 'targets', 'testname', 'working_dir'])
ls: cannot access '/home/benchmark/w/rosetta-2.hpc-b/T/main-62109.828715.ubuntu-20.04.clang.python36.scientific.mp_f19_decoy_discrimination.0/output/vatp/*_0001.pdb': No such file or directory
Traceback (most recent call last):
File "2.analyze.py", line 56, in <module>
get_refined = subprocess.check_output(f'ls {working_dir}/output/{target}/*_0001.pdb', shell=True).decode("utf-8").split('\n')
File "/home/benchmark/w/rosetta-2.hpc-b/prefix/ubuntu-20.04/rosetta-2/ubuntu-20.04/python-3.6.gcc/c4d35af457743a916293a15272dc5359/lib/python3.6/subprocess.py", line 356, in check_output
**kwargs).stdout
File "/home/benchmark/w/rosetta-2.hpc-b/prefix/ubuntu-20.04/rosetta-2/ubuntu-20.04/python-3.6.gcc/c4d35af457743a916293a15272dc5359/lib/python3.6/subprocess.py", line 438, in run
output=stdout, stderr=stderr)
subprocess.CalledProcessError: Command 'ls /home/benchmark/w/rosetta-2.hpc-b/T/main-62109.828715.ubuntu-20.04.clang.python36.scientific.mp_f19_decoy_discrimination.0/output/vatp/*_0001.pdb' returned non-zero exit status 2.