Test: mac.clang.python39.integration 「view this page in B3 βῆτα server」
Branch: master 「revision: №62022」
Test files: 「file-system-view」 「file-list-view」
Daemon: takeshi     Started at: 2023-06-30 09:16:38     Run time: 0:53:03      State: failed

Failed sub-tests (click for more details):
energy_based_clustering_alpha_aa_scorefile mp_dock mp_dock_ensemble

AddConstraintsToCurrentConformationMover AlignPDBInfoToSequences AlterSpecDisruption AnchorFinder AnchoredDesign AnchoredPDBCreator BFactorSelector BuildPeptide CCD_loop_closure CCS_PARCS ConsensusLoopDesign ContactMolecularSurface DARC_electrostatics DARC_make_ray_files DARC_sampling_on_the_fly DARC_shapeonly DNA_methylation DumpTrajectoryEnergy DumpTrajectoryEnergy_packing Enzrevert_xml FilterReportAsPoseExtraScoresMover FlipChirality FloppyTail HDXEnergy HOW_TO_MAKE_TESTS HelixBendFilter InterfaceAnalyzer InterfaceAnalyzer_allscores InterfaceAnalyzer_bothpack InterfaceAnalyzer_ligand InterfaceAnalyzer_prepack InterfaceAnalyzer_resfile InterfaceAnalyzer_tracer InterfaceDdG KIC_refine KIC_vicinity KIC_with_fragments LayerDesign LayerDesign_symm LayerSelector LoopAnalyzer LoopLengthChange ModifyVariantTypeMover MutateResidue_selector N-terminal_acetylation OversaturatedHbondAcceptorFilter PDB_diagnostic PTMPrediction PeptideCyclizeMover PeptideStubMover_prependRepeat PolarDesign2019 ProQ RBOut ReadResfile_with_selector RescorePDDF RescoreSAXS ResidueDisorder SID_ERMS_prediction SID_rescore SSElementSelector SecondaryStructureFilter SnugDock StrandCurvatureByLevels StrandHelixGeometryFilter ThreadingInputter TryDisulfPermutations UBQ_E2_thioester UBQ_E2_thioester_extra_bodies UBQ_E2_thioester_two_ubiquitins UBQ_Gp_CYD-CYD UBQ_Gp_LYX-Cterm UnsatSelector Werror_check abinitio abinitio_with_trRosetta add_constraints_to_current_conformation add_helix_sequence_constraints add_helix_sequence_constraints_advanced_setup add_job_pair_data angle_recovery_stats antibody_H3 antibody_H3_camelid antibody_cc antibody_designer antibody_designer_camelid antibody_designer_xml antibody_graft antibody_numbering_converter app_exception_handling assemble_domains_jd2 auto-drrafter_final_results auto-drrafter_setup_run_R1 auto-drrafter_setup_run_R2 auto-drrafter_setup_run_R3 autoNOE_rosetta autosetup_metals_centroid backbonegridsampler backbonegridsampler_multiresidue backbonegridsampler_nstruct_mode backrub backrub_interface_ddG backrub_pilot balancedKIC basic_gcn_tensorflow_test batch_relax beta_strand_homodimer bin_initialization bin_perturbation binselector binselector_probins bridge_chains broker broker_membrane bundlegridsampler bundlegridsampler_composition_energy bundlegridsampler_composition_energy_fract_range bundlegridsampler_copy_pitch bundlegridsampler_design bundlegridsampler_design_nstruct_mode bundlegridsampler_epsilon bundlegridsampler_multirepeat bundlegridsampler_z0_offset bundlegridsampler_z1_offset bundlereporter_filter burial_measure_centroid buried_area_filter buried_unsat_kinemage buried_unsat_voids_hbnet_design buried_unsat_voids_hbnet_design_symm c-term_conjugation calculate_sasa carbohydrates cart_min_glycans cartesianddg case_sensitive_filenames ccd_ends_graft_mover_rs central_class_modification centroid_disulfide_scores centroid_from_fullatom cl_complex_rescore classic_relax_1a19 cleanAlignment cluster cluster_alns cluster_calibur cluster_filter cmaes_minimizer coarse_rna_scoring code_template_tests_app code_template_tests_citations code_template_tests_src code_template_tests_unit coenzymes combine_silent composition_energy_layers constel constraints_metric contactMap continuous_sewing_hasher control_flow_rs copy_rotamer_mover count_cycpep_sequences coupled_moves crankshaft_flip create_clash-based_repack_shell create_sequence_motif crossaln crosslinkermover_1_4_bbmb_asymm crosslinkermover_1_4_bbmb_c2_symmetry crosslinkermover_1_4_bbmb_s2_symm crosslinkermover_octahedral crosslinkermover_octahedral_s2_symm crosslinkermover_square_planar crosslinkermover_square_planar_d2_symm crosslinkermover_square_pyramidal crosslinkermover_tetrahedral_metal crosslinkermover_tetrahedral_metal_asp crosslinkermover_tetrahedral_metal_c2_symmetry crosslinkermover_tetrahedral_metal_d2_symmetry crosslinkermover_thioether crosslinkermover_tma crosslinkermover_tma_symm crosslinkermover_trigonal_planar crosslinkermover_trigonal_planar_c3_symm crosslinkermover_trigonal_pyramidal crosslinkermover_trigonal_pyramidal_c3_symm cs_rosetta_rna cst_info cstfile_to_theozyme_pdb custom_basetype_packer_palette cyclization cycpep_design_pipeline cycpep_rdkit_metric cycpep_rigid_body_permutation_mover cycpep_symmetry_filter d_workflow database_jd2_compact_io database_jd2_io database_md5 database_session_resource ddG_ensemble ddG_of_mutation ddG_scan ddG_sym density_denovo density_refine density_refine_symm density_tools design_glycans design_w_custom_palette-CAAs design_w_custom_palette-NCAAs design_w_custom_palette-RNA dgdp_aio dgdp_script discontinuous_sewing_hasher distances disulfidize_beta_cys dna_interface_design dock_glycans dock_with_hotspot_place_simultaneously docking_distance_constraints docking_ensemble docking_ensemble_prepack docking_full_protocol docking_local_refine docking_local_refine_min docking_low_res docking_prepack docking_site_constraints doug_dock_design_min_mod2_cal_cal drrafter_error_estimation drrafter_run drrafter_setup drrafter_setup_build_missing drrafter_setup_protein_dock drrafter_setup_real_test_H drrafter_setup_real_test_H_no_init drrafter_setup_ribosome_test drrafter_setup_simple duplicate_header_guards energy_based_clustering_alpha_aa energy_based_clustering_alpha_aa_bin_analysis energy_based_clustering_alpha_aa_dihedral energy_based_clustering_alpha_aa_scorefile entropy_correction enumerative_sampling enzdes enzscore_filter_dimetal enzscore_filter_dimetal_sym enzscore_filter_ligand enzscore_filter_metal enzscore_filter_metal_sym erraser_minimize evolution exclusively_shared_jumps explicit_membrane extract_atomtree_diffs extract_pdbs farfar_mrna farnesyl fast_relax fast_relax_scripts favor_coupling_tensor favor_native_residue features features_database_schema features_parallel features_pdb features_pdb_mpi features_postgres features_scientific_benchmark fiber_diffraction fiber_diffraction_fad fit_helixparams fit_helixparams_a3b fit_helixparams_rms fix_alignment_to_match_pdb fixbb flexpepdock flexpepdock_abinitio fold_and_dock fold_cst_new fold_from_loops fragment_picker fragmentpicker_integration_demo fuzzy ga_ligand_dock ga_ligand_dock_amino_acid ga_ligand_dock_macrocycle gen_apo_grids gen_lig_grids generate_6Dloopclose genkic_bin_perturbing genkic_bin_sampling genkic_bin_setting genkic_dihedral_copying genkic_lowmemory_mode genkic_rama_filter genkic_ramaprepro_sampling genkic_sugars geometric_solvation glycan_anomers glycan_clash_check glycan_refinment glycan_relax glycan_sequon_scanner glycan_tree_relax glycomutagenesis glycopeptidedocking glycopeptidedocking_diglyco_long glycosylation grid_scores_features hbnet hbnet_asymm hbnet_energy hbnet_energy_rosettascripts_linear hbnet_energy_symm hbnet_use_input_rot hbonds hbonds_sp2 hbondstoresidue_selector hbs_design header_using_check helical_bundle helical_bundle_nonideal helical_bundle_predict helical_bundle_predict_psipred helical_bundle_predict_psipred_with_helix_globals helical_bundle_predict_sequence helical_bundle_predict_skipping_residues helix_from_sequence hierarchical_clustering homodimer_fnd_ref2015_memb hotspot_graft hotspot_hashing hotspot_stub_constraints hshash_utils hts_io hybridization hydrate hydrate_relax identify_cdr_clusters ig_dump include_cc_check interaction_graph_summary_metric interface_energy inv_kin_lig_loop_design inverse_rotamer_remodel iphold jd2test_PDBIO jd2test_PDBin_mmCIFout jd2test_PDBin_mmCIFout_extra_data_separate jd2test_mmCIFIO jd2test_mmCIFin_PDBout job_definition_script_vars jrelax jscore kinemage_grid_output kinematic_looprelax ld_converter ligand_database_io ligand_dock_7cpa ligand_dock_cholesterol ligand_dock_ensemble ligand_dock_grid ligand_dock_script ligand_motif_design ligand_motif_discovery ligand_motif_identification ligand_water_docking longest_continuous_polar_segment_filter loop_creation loop_grower_N_term_symm loop_hash loop_modeling make_and_perturb_bundle_multirepeat make_exemplar make_mainchain_potential make_mainchain_potential_symm make_mainchain_potential_symm_preproline make_rot_lib make_symmdef_file match_1c2t match_1n9l match_6cpa match_xml measure_lcaa_radii membrane_abinitio membrane_relax membrane_relax_hbond metal_setup metalloprotein_abrelax metalloprotein_broker metropolis_hastings mf_fixbb_des mf_fixbb_sc mf_flexbb_sc mg_modeler mg_modeler_lores mhc_epitope mhc_epitope_nmer_preload min_pack_min minimize_6Dloopclose minimize_with_elec_dens mirror_symm mixed_monte_carlo mm_params mmtfIO_score_test molfile_to_params molfile_to_params_polymer motif_dna_packer_design motif_extraction motif_score_filter mp_dock mp_dock_ensemble mp_dock_prepack mp_dock_setup mp_domain_assembly mp_domain_assembly_FtsQ mp_find_interface mp_interface_statistics mp_ligand_interface mp_loadtime mp_mutate_relax mp_mutate_repack mp_quick_relax mp_quick_relax_ref2015_memb mp_range_relax mp_relax mp_relax_w_ligand mp_score_jd2 mp_span_ang_ref2015_memb mp_span_from_pdb mp_symdock mp_symmetry_load mp_transform mp_transform_optimize mp_vis_emb mpi_multistate_design mpi_simple_cycpep_predict mpi_simple_cycpep_predict_4level mpi_simple_cycpep_predict_computing_pnear_to_all mpil_find_pore_ahelical mpil_find_pore_bbarrel mpil_load_implicit_lipids mr_protocols multistage_rosetta_scripts multistage_rosetta_scripts_clustering multithreaded_fastdesign multithreaded_fixbb multithreaded_interaction_graph_accuracy multithreaded_interaction_graph_accuracy_symm multithreaded_packrotamersmover mutate ncaa_fixbb ncbb_packer_palette netcharge_design netcharge_design_symm next_generation_KIC noe_assignment non-canonical_connectivities nonideal_rtmin nucleobase_sample_around number_of_residuetypes oligourea_design oligourea_predict oop_create oop_design oop_dock_design orbitals output_schema pH_mode pepspec pepspec_anchor_dock peptiderive per_residue_energies per_residue_sc_sasa per_residue_solvent_exposure pertmin perturb_helical_bundle perturb_helical_bundle_copying_pitch perturb_helical_bundle_epsilon perturb_helical_bundle_setting perturb_helical_bundle_z_offset phiselector phosphonate phosphorylation place_simultaneously pmut_scan pna pna_base_pairs pocket_measure pocket_relax pocket_suggest_targets polyaramid_test_trivial pose_sewing posttranslationalmod_io ppi_v3_suiteA ppi_v3_suiteB ppi_v3_suiteC ppi_v3_suiteD ppi_v3_suiteE ppi_v3_suiteF ppi_v3_suiteG ppk protocol_metric pwsho pymol_cif r_pdb2top r_rmsf ralford_dump_rotamers rama_mutation_selector range_relax_w_cst rb_recces rdkit_metrics read_polymeric_components readin_dna_rna_protein real_virt_mover recces_turner recon_design recon_design_mpi referencepose_mutateresidue relax_w_allatom_cst remodel remodel_disulfides remodel_disulfides_rosettascripts remodel_helical_repeat repack_with_elec_dens repeat_propagate repeat_propagate_v2 repeat_propagate_v3 repeat_relax replica_docking report_hbonds_for_plugin res_lipo_ref2015_memb residue_energy_breakdown resource_database_locator restype_converter rings rna_add_WC_stats rna_assemble rna_cluster rna_denovo rna_denovo_RNP_low_res rna_denovo_RNP_refine_native rna_denovo_base_pair_constraints rna_denovo_base_pair_setup rna_denovo_bps rna_denovo_bps_fixed_ends rna_denovo_bps_helix_ends rna_denovo_dna_bridge rna_denovo_fragment_homology_exclusion rna_denovo_grid_vdw rna_denovo_lariat rna_denovo_new_FT_2in_dens rna_denovo_new_FT_5P_j12_leadzyme rna_denovo_new_FT_RNP_2prot_dens rna_denovo_new_FT_rna_two_chains rna_denovo_new_libs rna_denovo_symm_hack rna_design rna_farfar_block_stack rna_farfar_noncanonical_hairpin rna_farfar_syn_chi_res rna_helix rna_minimize rna_minimize_6D_loop_close rna_motif rna_predict_chem_map rna_puzzle11_H2H3H4_run3_connectU40 rna_puzzle12_P5P6P7_DMS rna_puzzle5_P15P3P8_noP4P6_4RB_G208phosphate_ligation rna_puzzle5_p2_GAAA_mini rna_puzzle6_U75G76A77_on_thread1 rna_puzzle6_j67_into_p6p7rigidbody_thread1 rna_ribosome_tether rna_score rna_screen_phosphates rna_suitename rnp_ddg_calc_mut rnp_ddg_calc_setup rnp_ddg_calc_wt rnp_ddg_finalize rnp_ddg_relax_command_1 rnp_ddg_relax_command_2 rnp_ddg_relax_finalize rnp_ddg_relax_setup rollmover rosetta_scripts_hbond_options rosetta_scripts_include rosetta_scripts_info rosetta_scripts_jd3 rosetta_scripts_loops rosetta_scripts_setup rosie_ligand_docking rotamer_probability rotamer_recovery rotamer_recovery_compare_two_structures rs_flexbbmoves rs_loophash sasa_metric_options score12_docking score_aln score_jd2 score_only_silence sdf_reader secondary_structure_output seed_ensemble_JD2_JI select_best_unique_ligand_poses selected_residue_count_metric sequence_profile_constraints sequence_recovery sequence_tolerance set_torsion shobuns silent2frag simple_cycpep_predict simple_cycpep_predict_1_4_bbmb simple_cycpep_predict_angle simple_cycpep_predict_anglelength simple_cycpep_predict_beta_thioether_lariat simple_cycpep_predict_bondangle_bondlength simple_cycpep_predict_cartesian simple_cycpep_predict_cispro simple_cycpep_predict_cterm_isopeptide_lariat simple_cycpep_predict_cterm_isopeptide_lariat_tailless simple_cycpep_predict_design simple_cycpep_predict_nmethyl simple_cycpep_predict_nterm_isopeptide_lariat simple_cycpep_predict_nterm_isopeptide_lariat_tailless simple_cycpep_predict_octahedral_metal simple_cycpep_predict_peptoid simple_cycpep_predict_setting simple_cycpep_predict_sidechain_isopeptide simple_cycpep_predict_sidechain_isopeptide_reverse simple_cycpep_predict_square_planar_metal simple_cycpep_predict_square_pyramidal_metal simple_cycpep_predict_symm_gly simple_cycpep_predict_symmetric_sampling simple_cycpep_predict_tbmb simple_cycpep_predict_terminal_disulfide simple_cycpep_predict_terminal_disulfide_internal_permutations simple_cycpep_predict_terminal_disulfide_tails simple_cycpep_predict_terminal_disulfide_tails_2 simple_cycpep_predict_tetrahedral_metal simple_cycpep_predict_tetrahedral_metal_asp simple_cycpep_predict_thioether_cis_sampling simple_cycpep_predict_thioether_lariat simple_cycpep_predict_tma simple_cycpep_predict_trigonal_planar_metal simple_cycpep_predict_trigonal_pyramidal_metal simple_dna_test simple_glycosylation simple_grafting_movers simple_hbondstoatom simple_metric_cache simple_metric_features simple_metric_filter simple_metrics simple_metrics_in_protocols simple_metrics_per_residue site_constraint small_molecule_lattice_dock smallmover_resselector smart_annealer splice_in_4loops_longer splice_in_4loops_shorter splice_out_H1_H2_longer splice_out_H1_H2_same splice_out_H1_H2_shorter splice_out_H3_longer splice_out_H3_same splice_out_H3_shorter splice_out_L1_L2_longer splice_out_L1_L2_same splice_out_L1_L2_shorter splice_out_L3_longer splice_out_L3_same splice_out_L3_shorter startfrom_file stepwise_lores stored_residue_subset struc_set_fragment_picker super_aln supercharge surface_docking swa_protein_CCDclose swa_protein_build_at_Cterminus swa_protein_build_at_Nterminus swa_protein_cluster swa_protein_combine_loops swa_protein_loop_sampler swa_protein_prepack swa_rna_erraser swa_rna_gagu_01_append swa_rna_gagu_02_prepend swa_rna_gagu_03_append_to_silent swa_rna_gagu_04_clustering swa_rna_gagu_05_prepend_to_5primeterminus swa_rna_gagu_06_append_to_3primeterminus swa_rna_gagu_07_prepend_dinucleotide swa_rna_gagu_08_append_dinucleotide swa_rna_gagu_09_sample_virtual_ribose swa_rna_gagu_10_prepend_and_ccd_close swa_rna_gagu_11_append_and_ccd_close swa_rna_gagu_12_helix_addition swa_rna_gagu_13_chunk_combination_and_closure swa_rna_gagu_14_combine_long_loop_filtering swa_rna_gagu_15_combine_long_loop_sampling swa_rna_gagu_16_prepend_dinucleotide_on_dinucleotide swa_rna_gagu_17_append_floating_base swa_rna_gagu_18_rebuild_bulge swa_rna_gagu_19_prepend_floating_base_by_jump swa_rna_gagu_20_append_floating_base_by_jump swa_rna_gagu_21_prepend_dinucleotide_on_dinucleotide_by_jump swa_rna_gagu_22_prepend_and_kic_close swa_rna_gagu_23_append_and_kic_close swa_rna_loop_clusterer swa_rna_loop_sampler sweep_respair_energies swm_add_rosettascripts swm_beta_peptide_loop swm_build_full_model swm_dna_bridge swm_dna_loop swm_general_polymer_sampler swm_l_rna swm_protein_CCDmove swm_protein_from_scratch swm_protein_loop_sampler swm_protein_move_inside_coiledcoil_by_bond swm_protein_move_inside_helix_by_bond swm_protein_preminimize swm_rna_base_pair_constraints swm_rna_checkpoint_partition swm_rna_fourwayjunction swm_rna_loop_design swm_rna_move_align_dock swm_rna_move_inside_helix_by_bond swm_rna_move_inside_helix_by_jump swm_rna_move_two_strands swm_rna_nickedhelix swm_rna_protonated_adenosine swm_rna_singleloop swm_rna_srl_triplet symm_disulfidize symm_rotamer_boltzmann symmetric_cycpep_align_and_symmetrize symmetric_docking symmetrical_residue_selector symmetry_data_resource symmetry_multicomponent target_clash task_selector tcrmodel template_features tensorflow_connection_test tensorflow_manager tensorflow_simple_model_load_and_evaluate test1_benchmark test_computed_saxs_spectrum test_d_l_readin test_degreaser test_energy_method_options test_idealize test_rosetta_thread_manager_advanced_API test_rosetta_thread_manager_basic_API thermal_sampler thread_local_tracers_check threefold_symm_peptide_design threefoldlinkermover_tbmb threefoldlinkermover_tbmb_symmetric tna_base_pairs torsion_restricted_sampling trRosetta trRosettaConstraintGenerator trRosettaConstraintGenerator_rosettascripts trRosettaProtocolMover trRosettaProtocolMover_rosettascripts trRosettaProtocolMover_rosettascripts_diskwrite trRosettaProtocolMover_rosettascripts_diskwrite_only trRosetta_test_predict trRosetta_test_predict_ubiquitin trRosetta_test_predict_ubiquitin_cst_file_write trRosetta_test_predict_ubiquitin_cst_file_write_only trRosetta_test_predict_ubiquitin_init_by_bins unfolded_state_energy_calc validate_database vancomycin vip voids_penalty_energy_design voids_penalty_energy_design_symmetry write_mol_file zinc_heterodimer zinc_homodimer_design zinc_homodimer_setup
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"mhc_epitope_nmer_preload": { "log": "", "state": "passed" }, "min_pack_min": { "log": "", "state": "passed" }, "minimize_6Dloopclose": { "log": "", "state": "passed" }, "minimize_with_elec_dens": { "log": "", "state": "passed" }, "mirror_symm": { "log": "", "state": "passed" }, "mixed_monte_carlo": { "log": "", "state": "passed" }, "mm_params": { "log": "", "state": "passed" }, "mmtfIO_score_test": { "log": "", "state": "passed" }, "molfile_to_params": { "log": "", "state": "passed" }, "molfile_to_params_polymer": { "log": "", "state": "passed" }, "motif_dna_packer_design": { "log": "", "state": "passed" }, "motif_extraction": { "log": "", "state": "passed" }, "motif_score_filter": { "log": "", "state": "passed" }, "mp_dock": { "log": "Brief Diff:\nFiles /home/benchmark/working_dir/master:62021/mp_dock/log and /home/benchmark/working_dir/master:62022/mp_dock/log differ\r\n\n\nFull Diff:\ndiff -r '--exclude=command.sh' '--exclude=command.mpi.sh' '--exclude=observers' '--exclude=*.ignore' /home/benchmark/working_dir/master:62021/mp_dock/log /home/benchmark/working_dir/master:62022/mp_dock/log\r\n73,74c73,74\r\n< protocols.docking.membrane.MPDockingMover: low_res score function for docking: 0x7fe223060618\r\n< protocols.docking.membrane.MPDockingMover: high_res score function for docking: 0x7fe224046418\r\n---\r\n> protocols.docking.membrane.MPDockingMover: low_res score function for docking: 0x7fe5ac86d418\r\n> protocols.docking.membrane.MPDockingMover: high_res score function for docking: 0x7fe5cf1bea18\r\n", "state": "failed" }, "mp_dock_ensemble": { "log": "Brief Diff:\nOnly in /home/benchmark/working_dir/master:62022/mp_dock_ensemble: docking_fa19.sc\r\nFiles /home/benchmark/working_dir/master:62021/mp_dock_ensemble/flags and /home/benchmark/working_dir/master:62022/mp_dock_ensemble/flags differ\r\nFiles /home/benchmark/working_dir/master:62021/mp_dock_ensemble/inputs/1ensemble.txt.ensemble and /home/benchmark/working_dir/master:62022/mp_dock_ensemble/inputs/1ensemble.txt.ensemble differ\r\nFiles /home/benchmark/working_dir/master:62021/mp_dock_ensemble/inputs/2ensemble.txt.ensemble and /home/benchmark/working_dir/master:62022/mp_dock_ensemble/inputs/2ensemble.txt.ensemble differ\r\nOnly in /home/benchmark/working_dir/master:62022/mp_dock_ensemble/inputs: 2k9j_native_AB.pdb\r\nFiles /home/benchmark/working_dir/master:62021/mp_dock_ensemble/log and /home/benchmark/working_dir/master:62022/mp_dock_ensemble/log differ\r\nOnly in /home/benchmark/working_dir/master:62021/mp_dock_ensemble: ROSETTA_CRASH.log\r\nOnly in /home/benchmark/working_dir/master:62021/mp_dock_ensemble: .test_did_not_run.log\r\n\n\nFull Diff:\nOnly in /home/benchmark/working_dir/master:62022/mp_dock_ensemble: docking_fa19.sc\r\ndiff -r '--exclude=command.sh' '--exclude=command.mpi.sh' '--exclude=observers' '--exclude=*.ignore' /home/benchmark/working_dir/master:62021/mp_dock_ensemble/flags /home/benchmark/working_dir/master:62022/mp_dock_ensemble/flags\r\n1a2,4\r\n> -in:file:native inputs/2k9j_native_AB.pdb\r\n> \r\n> -out::overwrite\r\n23,24c26\r\n< -out:suffix _fa19\r\n< -run:multiple_processes_writing_to_one_directory\r\n---\r\n> -out:file:score_only \r\ndiff -r '--exclude=command.sh' '--exclude=command.mpi.sh' '--exclude=observers' '--exclude=*.ignore' /home/benchmark/working_dir/master:62021/mp_dock_ensemble/inputs/1ensemble.txt.ensemble /home/benchmark/working_dir/master:62022/mp_dock_ensemble/inputs/1ensemble.txt.ensemble\r\n1,5c1\r\n< ./partner1_starting_conf.pdb.ppk\r\n< ./br_receptor_0001.pdb.ppk\r\n< ./br_receptor_0002.pdb.ppk\r\n< 1chain/br_receptor_0003.pdb.ppk\r\n< 2.31135\r\n---\r\n> inputs/br_receptor_0001.pdb.ppk\r\n7,12c3\r\n< 1.30691\r\n< 0\r\n< -58.8271\r\n< -10.8153\r\n< -18.9044\r\n< -13.2381\r\n---\r\n> -9.85658\r\ndiff -r '--exclude=command.sh' '--exclude=command.mpi.sh' '--exclude=observers' '--exclude=*.ignore' /home/benchmark/working_dir/master:62021/mp_dock_ensemble/inputs/2ensemble.txt.ensemble /home/benchmark/working_dir/master:62022/mp_dock_ensemble/inputs/2ensemble.txt.ensemble\r\n1,4c1\r\n< ./partner2_starting_conf.pdb.ppk\r\n< ./br_ligand_0001.pdb.ppk\r\n< ./br_ligand_0002.pdb.ppk\r\n< ./br_ligand_0003.pdb.ppk\r\n---\r\n> inputs/br_ligand_0001.pdb.ppk\r\n6,12c3\r\n< 0\r\n< 0\r\n< 0\r\n< -72.5884\r\n< 22.9222\r\n< 37.7884\r\n< 7.97015\r\n---\r\n> 22.3573\r\n\\ No newline at end of file\r\nOnly in /home/benchmark/working_dir/master:62022/mp_dock_ensemble/inputs: 2k9j_native_AB.pdb\r\ndiff -r '--exclude=command.sh' '--exclude=command.mpi.sh' '--exclude=observers' '--exclude=*.ignore' /home/benchmark/working_dir/master:62021/mp_dock_ensemble/log /home/benchmark/working_dir/master:62022/mp_dock_ensemble/log\r\n3a4\r\n> core.import_pose.import_pose: File 'inputs/2k9j_native_AB.pdb' automatically determined to be of type PDB\r\n44a46\r\n> core.import_pose.import_pose: File 'inputs/2k9j_native_AB.pdb' automatically determined to be of type PDB\r\n73a76\r\n> core.import_pose.import_pose: File 'inputs/2k9j_native_AB.pdb' automatically determined to be of type PDB\r\n80a84,86\r\n> protocols.docking.membrane.MPDockingMover: Setting native from flag -in::file::native\r\n> core.import_pose.import_pose: File 'inputs/2k9j_native_AB.pdb' automatically determined to be of type PDB\r\n> core.import_pose.import_pose: File 'inputs/2k9j_native_AB.pdb' automatically determined to be of type PDB\r\n88,89c94,95\r\n< protocols.docking.membrane.MPDockingMover: low_res score function for docking: 0x7fa56f8a7c18\r\n< protocols.docking.membrane.MPDockingMover: high_res score function for docking: 0x7fa52e8c9618\r\n---\r\n> protocols.docking.membrane.MPDockingMover: low_res score function for docking: 0x7fd2d896dc18\r\n> protocols.docking.membrane.MPDockingMover: high_res score function for docking: 0x7fd25f8f3618\r\n242,282c248,2053\r\n< core.import_pose.import_pose: [ ERROR ] File: ./partner1_starting_conf.pdb.ppk not found!\r\n< \r\n< ERROR: Cannot open file \"./partner1_starting_conf.pdb.ppk\"\r\n< ERROR:: Exit from: src/core/import_pose/import_pose.cc line: 361\r\n< protocols.jd2.JobDistributor: [ ERROR ] \r\n< \r\n< [ERROR] Exception caught by JobDistributor for job 2k9j_AB_fa19_0001\r\n< \r\n< [ ERROR ]: Caught exception:\r\n< \r\n< \r\n< File: src/core/import_pose/import_pose.cc:361\r\n< [ ERROR ] UtilityExitException\r\n< ERROR: Cannot open file \"./partner1_starting_conf.pdb.ppk\"\r\n< \r\n< \r\n< ------------------------ Begin developer's backtrace ------------------------- \r\n< BACKTRACE:\r\n< 0 libutility.dylib 0x0000000109e4e360 backtrace_string(int) + 80\r\n< 1 libutility.dylib 0x0000000109e70abe utility::excn::Exception::Exception(char const*, int, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&) + 190\r\n< 2 libutility.dylib 0x0000000109e520a0 utility::UtilityExitException::UtilityExitException(char const*, int, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&) + 112\r\n< 3 libutility.dylib 0x0000000109e51fd7 utility::exit(char const*, int, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, int) + 55\r\n< 4 libcore.6.dylib 0x00000001048ee4e8 core::import_pose::pose_from_file(core::pose::Pose&, core::chemical::ResidueTypeSet const&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, core::import_pose::ImportPoseOptions const&, bool, core::import_pose::FileType) + 3272\r\n< 5 libcore.6.dylib 0x00000001048ef514 core::import_pose::poses_from_files(core::chemical::ResidueTypeSet const&, utility::vector1<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > > > const&, bool, core::import_pose::FileType) + 164\r\n< 6 libcore.6.dylib 0x00000001048ef3b7 core::import_pose::poses_from_files(utility::vector1<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > > > const&, bool, core::import_pose::FileType) + 87\r\n< 7 libprotocols_h.5.dylib 0x00000001015e3574 protocols::docking::DockingEnsemble::load_ensemble() + 2308\r\n< 8 libprotocols_h.5.dylib 0x00000001015e27a7 protocols::docking::DockingEnsemble::DockingEnsemble(unsigned long, unsigned long, unsigned long, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, std::__1::shared_ptr<core::scoring::ScoreFunction const>, std::__1::shared_ptr<core::scoring::ScoreFunction const>) + 471\r\n< 9 libprotocols_h.5.dylib 0x000000010162662a std::__1::shared_ptr<protocols::docking::DockingEnsemble> std::__1::make_shared<protocols::docking::DockingEnsemble, unsigned long&, unsigned long&, unsigned long const&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >&, char const (&) [15], std::__1::shared_ptr<core::scoring::ScoreFunction>&, std::__1::shared_ptr<core::scoring::ScoreFunction>&, void>(unsigned long&, unsigned long&, unsigned long const&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >&, char const (&) [15], std::__1::shared_ptr<core::scoring::ScoreFunction>&, std::__1::shared_ptr<core::scoring::ScoreFunction>&) + 314\r\n< 10 libprotocols_h.5.dylib 0x00000001016241ce protocols::docking::DockingProtocol::finalize_setup(core::pose::Pose&) + 4974\r\n< 11 libprotocols_h.5.dylib 0x000000010162972f protocols::docking::DockingProtocol::apply(core::pose::Pose&) + 863\r\n< 12 libprotocols_h.5.dylib 0x0000000101679f30 protocols::docking::membrane::MPDockingMover::apply(core::pose::Pose&) + 1776\r\n< 13 libprotocols.1.dylib 0x000000010657f789 protocols::jd2::JobDistributor::run_one_job(std::__1::shared_ptr<protocols::moves::Mover>&, long, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >&, unsigned long&, unsigned long&, bool) + 8041\r\n< 14 libprotocols.1.dylib 0x000000010657ca42 protocols::jd2::JobDistributor::go_main(std::__1::shared_ptr<protocols::moves::Mover>) + 194\r\n< 15 libprotocols.1.dylib 0x0000000106577b32 protocols::jd2::FileSystemJobDistributor::go(std::__1::shared_ptr<protocols::moves::Mover>) + 66\r\n< 16 mp_dock.default.macosclangrelease 0x00000001000b9a9b main + 251\r\n< 17 dyld 0x000000010f8c952e start + 462\r\n< ------------------------- End developer's backtrace -------------------------- \r\n< \r\n< \r\n< AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.\r\n< \r\n---\r\n> core.import_pose.import_pose: File 'inputs/br_receptor_0001.pdb.ppk' automatically determined to be of type PDB\r\n> core.chemical.GlobalResidueTypeSet: Finished initializing centroid residue type set. Created 69 residue types\r\n> protocols.moves.DockingEnsemble: ensemble summary: start_res_ 1 end_res_ 42 conf_size_ 42 ensemble_size_ 1\r\n> protocols.docking.DockingProtocol: Ensemble 2: inputs/2ensemble.txt.ensemble\r\n> protocols.moves.DockingEnsemble: Loading Ensemble\r\n> core.import_pose.import_pose: File 'inputs/br_ligand_0001.pdb.ppk' automatically determined to be of type PDB\r\n> protocols.moves.DockingEnsemble: ensemble summary: start_res_ 43 end_res_ 85 conf_size_ 43 ensemble_size_ 1\r\n> protocols.docking.DockFilters: setting clash filter to 5.0\r\n> protocols.docking.DockFilters: setting clash filter to 5.0\r\n> protocols.docking.DockingProtocol: ////////////////////////////////////////////////////////////////////////////////\r\n> protocols.docking.DockingProtocol: /// Rosetta 3 Docking Protocol ///\r\n> protocols.docking.DockingProtocol: /// ///\r\n> protocols.docking.DockingProtocol: /// Dockable Jumps: 1 ///\r\n> protocols.docking.DockingProtocol: /// Low Resolution Docking Protocol: on ///\r\n> protocols.docking.DockingProtocol: /// High Resolution Docking Protocol: on ///\r\n> protocols.docking.DockingProtocol: /// Low Resolution Filter: on ///\r\n> protocols.docking.DockingProtocol: /// High Resolution Filter: on ///\r\n> protocols.docking.DockingProtocol: ////////////////////////////////////////////////////////////////////////////////\r\n> protocols.docking.DockingProtocol: FOLD_TREE EDGE 86 1 2 EDGE 1 42 -1 EDGE 1 43 1 EDGE 43 85 -1 \r\n> protocols.docking.DockingInitialPerturbation: dock_pert: true\r\n> protocols.docking.DockingInitialPerturbation: option[ docking::dock_pert ]()8 3\r\n> protocols.docking.DockingInitialPerturbation: sliding into contact for centroid mode\r\n> protocols.docking.DockingInitialPerturbation: Adjusting slide axis for membrane proteins\r\n> protocols.docking.DockingInitialPerturbation: slide axis before: (0.000000, 0.000000, 0.000000)\r\n> protocols.membrane.geometry.Embedding: Constructing Embedding object from topology and pose\r\n> protocols.membrane.geometry.Embedding: Computing membrane embedding from TMspans: \r\n> protocols.membrane.geometry.EmbeddingDef: Computing membrane embedding from TMspan 11 to 30\r\n> protocols.membrane.geometry.EmbeddingDef: Computing membrane embedding from TMspan 11 to 30\r\n> protocols.membrane.geometry.Embedding: Span Embedding: \r\n> protocols.membrane.geometry.EmbeddingDef: Embedding: center: (8.775500, -0.266000, 7.939000), normal: (-0.550620, 0.304929, 0.777069)\r\n> protocols.membrane.geometry.Embedding: Total Embedding: \r\n> protocols.membrane.geometry.EmbeddingDef: Embedding: center: (8.775500, -0.266000, 7.939000), normal: (-0.550620, 0.304929, 0.777069)\r\n> protocols.membrane.geometry.Embedding: Constructing Embedding object from topology and pose\r\n> protocols.membrane.geometry.Embedding: Computing membrane embedding from TMspans: \r\n> protocols.membrane.geometry.EmbeddingDef: Computing membrane embedding from TMspan 51 to 75\r\n> protocols.membrane.geometry.EmbeddingDef: Computing membrane embedding from TMspan 51 to 75\r\n> protocols.membrane.geometry.Embedding: Span Embedding: \r\n> protocols.membrane.geometry.EmbeddingDef: Embedding: center: (-5.279048, 0.826414, 3.298587), normal: (-0.292304, 0.763793, 0.575481)\r\n> protocols.membrane.geometry.Embedding: Total Embedding: \r\n> protocols.membrane.geometry.EmbeddingDef: Embedding: center: (-5.279048, 0.826414, 3.298587), normal: (-0.292304, 0.763793, 0.575481)\r\n> protocols.membrane.geometry.Embedding: Constructing Embedding object from topology and pose\r\n> protocols.membrane.geometry.Embedding: Computing membrane embedding from TMspans: \r\n> protocols.membrane.geometry.EmbeddingDef: Computing membrane embedding from TMspan 11 to 30\r\n> protocols.membrane.geometry.EmbeddingDef: Computing membrane embedding from TMspan 11 to 30\r\n> protocols.membrane.geometry.Embedding: Span Embedding: \r\n> protocols.membrane.geometry.EmbeddingDef: Embedding: center: (8.775500, -0.266000, 7.939000), normal: (-0.550620, 0.304929, 0.777069)\r\n> protocols.membrane.geometry.Embedding: Total Embedding: \r\n> protocols.membrane.geometry.EmbeddingDef: Embedding: center: (8.775500, -0.266000, 7.939000), normal: (-0.550620, 0.304929, 0.777069)\r\n> protocols.membrane.geometry.Embedding: Constructing Embedding object from topology and pose\r\n> protocols.membrane.geometry.Embedding: Computing membrane embedding from TMspans: \r\n> protocols.membrane.geometry.EmbeddingDef: Computing membrane embedding from TMspan 51 to 75\r\n> protocols.membrane.geometry.EmbeddingDef: Computing membrane embedding from TMspan 51 to 75\r\n> protocols.membrane.geometry.Embedding: Span Embedding: \r\n> protocols.membrane.geometry.EmbeddingDef: Embedding: center: (-5.279048, 0.826414, 3.298587), normal: (-0.292304, 0.763793, 0.575481)\r\n> protocols.membrane.geometry.Embedding: Total Embedding: \r\n> protocols.membrane.geometry.EmbeddingDef: Embedding: center: (-5.279048, 0.826414, 3.298587), normal: (-0.292304, 0.763793, 0.575481)\r\n> protocols.docking.DockingInitialPerturbation: center1: (8.775500, -0.266000, 7.939000)\r\n> protocols.docking.DockingInitialPerturbation: center2: (-5.279048, 0.826414, 3.298587)\r\n> protocols.membrane.geometry.Embedding: Constructing Embedding object from topology and pose\r\n> protocols.membrane.geometry.Embedding: Computing membrane embedding from TMspans: \r\n> protocols.membrane.geometry.EmbeddingDef: Computing membrane embedding from TMspan 11 to 30\r\n> protocols.membrane.geometry.EmbeddingDef: Computing membrane embedding from TMspan 11 to 30\r\n> protocols.membrane.geometry.Embedding: Span Embedding: \r\n> protocols.membrane.geometry.EmbeddingDef: Embedding: center: (8.775500, -0.266000, 7.939000), normal: (-0.550620, 0.304929, 0.777069)\r\n> protocols.membrane.geometry.Embedding: Total Embedding: \r\n> protocols.membrane.geometry.EmbeddingDef: Embedding: center: (8.775500, -0.266000, 7.939000), normal: (-0.550620, 0.304929, 0.777069)\r\n> protocols.membrane.geometry.Embedding: Constructing Embedding object from topology and pose\r\n> protocols.membrane.geometry.Embedding: Computing membrane embedding from TMspans: \r\n> protocols.membrane.geometry.EmbeddingDef: Computing membrane embedding from TMspan 51 to 75\r\n> protocols.membrane.geometry.EmbeddingDef: Computing membrane embedding from TMspan 51 to 75\r\n> protocols.membrane.geometry.Embedding: Span Embedding: \r\n> protocols.membrane.geometry.EmbeddingDef: Embedding: center: (-4.282055, 0.748921, 3.298587), normal: (-0.292304, 0.763793, 0.575481)\r\n> protocols.membrane.geometry.Embedding: Total Embedding: \r\n> protocols.membrane.geometry.EmbeddingDef: Embedding: center: (-4.282055, 0.748921, 3.298587), normal: (-0.292304, 0.763793, 0.575481)\r\n> protocols.docking.DockingInitialPerturbation: dist1: 14.8411, dist2: 13.8947\r\n> protocols.docking.DockingInitialPerturbation: center1: (8.775500, -0.266000, 7.939000)\r\n> protocols.docking.DockingInitialPerturbation: center2: (-4.282055, 0.748921, 3.298587)\r\n> protocols.docking.DockingInitialPerturbation: slide axis negated...\r\n> protocols.docking.DockingInitialPerturbation: slide axis after: (-0.996993, 0.077493, -0.000000)\r\n> protocols.docking.DockingInitialPerturbation: sliding into contact\r\n> protocols.docking.DockingInitialPerturbation: Moving away\r\n> protocols.docking.DockingInitialPerturbation: Moving together\r\n> protocols.moves.RigidBodyMover: distance between partners: 16.326\r\n> protocols.moves.RigidBodyMover: distance between partners: 12.8367\r\n> protocols.docking.DockingInitialPerturbation: step size of 1.0...\r\n> protocols.docking.DockingInitialPerturbation: interchain_vdw scores: 13.3271\r\n> protocols.moves.RigidBodyMover: distance between partners: 10.0928\r\n> protocols.docking.DockingProtocol: finished initial perturbation\r\n> protocols.docking.DockingLowRes: in DockingLowRes.apply\r\n> core.scoring.motif: init MotifHashManager\r\n> core.scoring.motif: reading xform_score_data_BB_BB\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_AA.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_AC.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_AD.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_AE.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_AF.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_AG.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_AH.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_AI.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_AK.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_AL.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_AM.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_AN.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_AP.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_AQ.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_AR.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_AS.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_AT.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_AV.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_AW.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_AY.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_CA.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_CC.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_CD.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_CE.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_CF.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_CG.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_CH.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_CI.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_CK.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_CL.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_CM.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_CN.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_CP.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_CQ.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_CR.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_CS.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_CT.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_CV.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_CW.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_CY.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_DA.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_DC.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_DD.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_DE.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_DF.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_DG.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_DH.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_DI.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_DK.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_DL.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_DM.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_DN.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_DP.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_DQ.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_DR.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_DS.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_DT.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_DV.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_DW.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_DY.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_EA.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_EC.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_ED.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_EE.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_EF.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_EG.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_EH.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_EI.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_EK.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_EL.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_EM.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_EN.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_EP.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_EQ.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_ER.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_ES.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_ET.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_EV.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_EW.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_EY.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_FA.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_FC.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_FD.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_FE.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_FF.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_FG.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_FH.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_FI.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_FK.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_FL.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_FM.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_FN.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_FP.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_FQ.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_FR.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_FS.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_FT.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_FV.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_FW.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_FY.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_GA.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_GC.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_GD.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_GE.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_GF.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_GG.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_GH.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_GI.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_GK.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_GL.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_GM.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_GN.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_GP.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_GQ.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_GR.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_GS.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_GT.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_GV.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_GW.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_GY.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_HA.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_HC.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_HD.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_HE.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_HF.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_HG.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_HH.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_HI.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_HK.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_HL.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_HM.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_HN.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_HP.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_HQ.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_HR.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_HS.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_HT.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_HV.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_HW.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_HY.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_IA.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_IC.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_ID.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_IE.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_IF.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_IG.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_IH.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_II.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_IK.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_IL.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_IM.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_IN.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_IP.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_IQ.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_IR.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_IS.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_IT.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_IV.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_IW.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_IY.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_KA.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_KC.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_KD.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_KE.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_KF.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_KG.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_KH.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_KI.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_KK.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_KL.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_KM.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_KN.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_KP.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_KQ.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_KR.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_KS.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_KT.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_KV.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_KW.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_KY.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_LA.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_LC.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_LD.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_LE.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_LF.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_LG.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_LH.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_LI.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_LK.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_LL.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_LM.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_LN.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_LP.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_LQ.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_LR.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_LS.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_LT.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_LV.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_LW.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_LY.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_MA.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_MC.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_MD.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_ME.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_MF.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_MG.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_MH.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_MI.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_MK.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_ML.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_MM.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_MN.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_MP.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_MQ.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_MR.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_MS.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_MT.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_MV.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_MW.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_MY.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_NA.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_NC.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_ND.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_NE.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_NF.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_NG.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_NH.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_NI.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_NK.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_NL.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_NM.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_NN.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_NP.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_NQ.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_NR.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_NS.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_NT.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_NV.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_NW.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_NY.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_PA.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_PC.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_PD.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_PE.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_PF.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_PG.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_PH.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_PI.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_PK.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_PL.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_PM.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_PN.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_PP.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_PQ.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_PR.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_PS.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_PT.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_PV.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_PW.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_PY.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_QA.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_QC.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_QD.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_QE.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_QF.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_QG.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_QH.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_QI.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_QK.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_QL.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_QM.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_QN.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_QP.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_QQ.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_QR.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_QS.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_QT.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_QV.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_QW.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_QY.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_RA.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_RC.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_RD.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_RE.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_RF.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_RG.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_RH.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_RI.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_RK.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_RL.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_RM.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_RN.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_RP.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_RQ.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_RR.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_RS.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_RT.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_RV.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_RW.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_RY.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_SA.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_SC.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_SD.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_SE.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_SF.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_SG.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_SH.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_SI.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_SK.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_SL.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_SM.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_SN.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_SP.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_SQ.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_SR.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_SS.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_ST.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_SV.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_SW.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_SY.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_TA.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_TC.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_TD.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_TE.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_TF.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_TG.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_TH.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_TI.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_TK.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_TL.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_TM.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_TN.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_TP.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_TQ.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_TR.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_TS.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_TT.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_TV.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_TW.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_TY.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_VA.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_VC.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_VD.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_VE.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_VF.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_VG.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_VH.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_VI.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_VK.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_VL.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_VM.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_VN.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_VP.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_VQ.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_VR.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_VS.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_VT.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_VV.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_VW.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_VY.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_WA.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_WC.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_WD.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_WE.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_WF.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_WG.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_WH.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_WI.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_WK.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_WL.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_WM.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_WN.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_WP.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_WQ.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_WR.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_WS.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_WT.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_WV.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_WW.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_WY.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_YA.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_YC.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_YD.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_YE.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_YF.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_YG.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_YH.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_YI.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_YK.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_YL.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_YM.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_YN.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_YP.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_YQ.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_YR.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_YS.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_YT.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_YV.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_YW.xh.bin.gz\r\n> core.scoring.motif: XformScore::read_binary(fname): ROSETTA/database/additional_protocol_data/motif_dock/xh_16_YY.xh.bin.gz\r\n> core.scoring.motif: preload_motif_data\r\n> protocols.docking.DockingLowRes: ////////////////////////////////////////////////////////////////////////////////\r\n> protocols.docking.DockingLowRes: /// Docking Low Res Protocol ///\r\n> protocols.docking.DockingLowRes: /// ///\r\n> protocols.docking.DockingLowRes: /// Centroid Inner Cycles: 50 ///\r\n> protocols.docking.DockingLowRes: /// Centroid Outer Cycles: 10 ///\r\n> protocols.docking.DockingLowRes: /// Scorefunction: ///\r\n> protocols.docking.DockingLowRes: ScoreFunction::show():\r\n> weights: (motif_dock 1) (interchain_vdw 1) (dock_ens_conf 1)\r\n> analytic_etable_evaluation: 1\r\n> protocols.docking.DockingLowRes: HbondOptions::show: mphbond: false\r\n> protocols.docking.DockingLowRes: \r\n> protocols.docking.DockingLowRes: \r\n> protocols.docking.DockingLowRes: ////////////////////////////////////////////////////////////////////////////////\r\n> protocols.docking.DockingLowRes: /// Ensemble 1: on ///\r\n> protocols.docking.DockingLowRes: /// Ensemble 2: on ///\r\n> protocols.docking.DockingLowRes: ::::::::::::::::::Centroid Adaptive:::::::::::::::::::\r\n> protocols.docking.DockingLowRes: Translation magnitude: 0.7\r\n> protocols.docking.DockingLowRes: Rotation magnitude: 5\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Accepted\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Accepted\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Accepted\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Accepted\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowResEnsemble: Rigid body perturbation acceptance rate is: 0.0727273\r\n> protocols.docking.DockingLowResEnsemble: Conformer switch acceptance rate for ensemble 1 is: 1\r\n> protocols.docking.DockingLowResEnsemble: Conformer switch acceptance rate for ensemble 2 is: 1\r\n> protocols.docking.DockingLowRes: Translation magnitude: 0.63\r\n> protocols.docking.DockingLowRes: Rotation magnitude: 4.5\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowResEnsemble: Rigid body perturbation acceptance rate is: 0\r\n> protocols.docking.DockingLowResEnsemble: Conformer switch acceptance rate for ensemble 1 is: 1\r\n> protocols.docking.DockingLowResEnsemble: Conformer switch acceptance rate for ensemble 2 is: 1\r\n> protocols.docking.DockingLowRes: Translation magnitude: 0.567\r\n> protocols.docking.DockingLowRes: Rotation magnitude: 4.05\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowResEnsemble: Rigid body perturbation acceptance rate is: 0\r\n> protocols.docking.DockingLowResEnsemble: Conformer switch acceptance rate for ensemble 1 is: 1\r\n> protocols.docking.DockingLowResEnsemble: Conformer switch acceptance rate for ensemble 2 is: 1\r\n> protocols.docking.DockingLowRes: Translation magnitude: 0.5103\r\n> protocols.docking.DockingLowRes: Rotation magnitude: 3.645\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Accepted\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowResEnsemble: Rigid body perturbation acceptance rate is: 0.0196078\r\n> protocols.docking.DockingLowResEnsemble: Conformer switch acceptance rate for ensemble 1 is: 1\r\n> protocols.docking.DockingLowResEnsemble: Conformer switch acceptance rate for ensemble 2 is: 1\r\n> protocols.docking.DockingLowRes: Translation magnitude: 0.45927\r\n> protocols.docking.DockingLowRes: Rotation magnitude: 3.2805\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Accepted\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Accepted\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowResEnsemble: Rigid body perturbation acceptance rate is: 0.0444444\r\n> protocols.docking.DockingLowResEnsemble: Conformer switch acceptance rate for ensemble 1 is: 1\r\n> protocols.docking.DockingLowResEnsemble: Conformer switch acceptance rate for ensemble 2 is: 1\r\n> protocols.docking.DockingLowRes: Translation magnitude: 0.413343\r\n> protocols.docking.DockingLowRes: Rotation magnitude: 2.95245\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowResEnsemble: Rigid body perturbation acceptance rate is: 0\r\n> protocols.docking.DockingLowResEnsemble: Conformer switch acceptance rate for ensemble 1 is: 1\r\n> protocols.docking.DockingLowResEnsemble: Conformer switch acceptance rate for ensemble 2 is: 1\r\n> protocols.docking.DockingLowRes: Translation magnitude: 0.372009\r\n> protocols.docking.DockingLowRes: Rotation magnitude: 2.65721\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Accepted\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowResEnsemble: Rigid body perturbation acceptance rate is: 0.0178571\r\n> protocols.docking.DockingLowResEnsemble: Conformer switch acceptance rate for ensemble 1 is: 1\r\n> protocols.docking.DockingLowResEnsemble: Conformer switch acceptance rate for ensemble 2 is: 1\r\n> protocols.docking.DockingLowRes: Translation magnitude: 0.334808\r\n> protocols.docking.DockingLowRes: Rotation magnitude: 2.39148\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Accepted\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Accepted\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowResEnsemble: Rigid body perturbation acceptance rate is: 0.0416667\r\n> protocols.docking.DockingLowResEnsemble: Conformer switch acceptance rate for ensemble 1 is: 1\r\n> protocols.docking.DockingLowResEnsemble: Conformer switch acceptance rate for ensemble 2 is: 1\r\n> protocols.docking.DockingLowRes: Translation magnitude: 0.301327\r\n> protocols.docking.DockingLowRes: Rotation magnitude: 2.15234\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowResEnsemble: Rigid body perturbation acceptance rate is: 0\r\n> protocols.docking.DockingLowResEnsemble: Conformer switch acceptance rate for ensemble 1 is: 1\r\n> protocols.docking.DockingLowResEnsemble: Conformer switch acceptance rate for ensemble 2 is: 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Translation magnitude: 0.271194\r\n> protocols.docking.DockingLowRes: Rotation magnitude: 1.9371\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowRes: Rigid Body Perturbation Rejected\r\n> protocols.docking.DockingLowResEnsemble: Rigid body perturbation acceptance rate is: 0\r\n> protocols.docking.DockingLowResEnsemble: Conformer switch acceptance rate for ensemble 1 is: 1\r\n> protocols.docking.DockingLowResEnsemble: Conformer switch acceptance rate for ensemble 2 is: 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 1\r\n> protocols.docking.ConformerSwitchMover: Switching partner with conformer: 1\r\n> protocols.docking.DockingLowResEnsemble: Accepted Conformer Switch for Ensemble 2\r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.pack_missing_sidechains: packing residue number 2 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 3 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 4 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 5 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 6 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 7 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 8 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 9 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 10 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 11 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 12 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 13 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 14 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 15 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 17 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 18 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 21 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 22 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 23 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 24 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 25 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 26 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 27 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 28 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 29 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 30 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 31 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 32 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 33 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 34 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 36 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 37 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 38 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 39 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 40 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 41 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 42 because of missing atom number 6 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 43 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 44 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 45 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 46 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 47 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 49 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 50 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 51 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 52 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 53 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 54 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 55 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 56 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 57 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 58 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 59 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 61 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 62 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 63 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 64 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 65 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 67 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 68 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 69 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 70 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 71 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 72 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 73 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 74 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 75 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 76 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 77 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 78 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 79 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 80 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 81 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 82 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 83 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 84 because of missing atom number 5 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 85 because of missing atom number 6 atom name CB \r\n> core.pack.pack_missing_sidechains: packing residue number 86 because of missing atom number 1 atom name THKN\r\n> basic.io.database: Database file opened: scoring/score_functions/elec_cp_reps.dat\r\n> core.scoring.elec.util: Read 40 countpair representative atoms\r\n> core.pack.dunbrack.RotamerLibrary: shapovalov_lib_fixes_enable option is true.\r\n> core.pack.pack_rotamers: built 603 rotamers at 78 positions.\r\n> core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph\r\n> protocols.moves.DockingEnsemble: Recovered side chains from conformer number: 1\r\n> protocols.moves.DockingEnsemble: Recovered side chains from conformer number: 1\r\n> protocols.docking.DockingProtocol: Score before repack:\r\n> protocols.docking.DockingProtocol: \r\n> ------------------------------------------------------------\r\n> Scores Weight Raw Score Wghtd.Score\r\n> ------------------------------------------------------------\r\n> fa_atr 1.000 -422.357 -422.357\r\n> fa_rep 0.550 3458.088 1901.948\r\n> fa_sol 1.000 270.241 270.241\r\n> fa_intra_rep 0.005 243.611 1.218\r\n> fa_intra_sol_xover4 1.000 13.584 13.584\r\n> lk_ball_wtd 1.000 -9.881 -9.881\r\n> fa_elec 1.000 -89.585 -89.585\r\n> pro_close 1.250 29.312 36.640\r\n> hbond_sr_bb 1.000 -41.671 -41.671\r\n> hbond_lr_bb 1.000 -1.415 -1.415\r\n> hbond_bb_sc 1.000 -2.606 -2.606\r\n> hbond_sc 1.000 0.000 0.000\r\n> dslf_fa13 1.250 0.000 0.000\r\n> omega 0.400 6.577 2.631\r\n> fa_dun 0.700 98.728 69.109\r\n> p_aa_pp 0.600 -10.241 -6.145\r\n> yhh_planarity 0.625 0.000 0.000\r\n> ref 1.000 76.516 76.516\r\n> fa_water_to_bilayer 0.500 -85.943 -42.971\r\n> rama_prepro 0.450 59.285 26.678\r\n> ---------------------------------------------------\r\n> Total weighted score: 1781.935\r\n> core.pack.pack_rotamers: built 601 rotamers at 86 positions.\r\n> core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph\r\n> protocols.docking.DockingProtocol: Score after repack:\r\n> protocols.docking.DockingProtocol: \r\n> ------------------------------------------------------------\r\n> Scores Weight Raw Score Wghtd.Score\r\n> ------------------------------------------------------------\r\n> fa_atr 1.000 -400.816 -400.816\r\n> fa_rep 0.550 647.771 356.274\r\n> fa_sol 1.000 269.112 269.112\r\n> fa_intra_rep 0.005 245.069 1.225\r\n> fa_intra_sol_xover4 1.000 14.014 14.014\r\n> lk_ball_wtd 1.000 -9.239 -9.239\r\n> fa_elec 1.000 -88.357 -88.357\r\n> pro_close 1.250 29.312 36.640\r\n> hbond_sr_bb 1.000 -41.671 -41.671\r\n> hbond_lr_bb 1.000 -1.415 -1.415\r\n> hbond_bb_sc 1.000 -2.607 -2.607\r\n> hbond_sc 1.000 0.000 0.000\r\n> dslf_fa13 1.250 0.000 0.000\r\n> omega 0.400 6.577 2.631\r\n> fa_dun 0.700 106.811 74.767\r\n> p_aa_pp 0.600 -10.241 -6.145\r\n> yhh_planarity 0.625 0.000 0.000\r\n> ref 1.000 76.516 76.516\r\n> fa_water_to_bilayer 0.500 -85.365 -42.683\r\n> rama_prepro 0.450 59.285 26.678\r\n> ---------------------------------------------------\r\n> Total weighted score: 264.926\r\n> protocols.docking.DockMCMProtocol: in DockMCMProtocol.apply\r\n> protocols.docking.DockMCMProtocol: Using the DockingTaskFactory.\r\n> protocols.docking.DockMCMCycle: Setting up defaults for DockMCMCycle: \r\n> protocols.docking.DockMCMCycle: ////////////////////////////////////////////////////////////////////////////////\r\n> protocols.docking.DockMCMCycle: /// Dockable Jumps: 1 ///\r\n> protocols.docking.DockMCMCycle: /// Translation: 0.1 ///\r\n> protocols.docking.DockMCMCycle: /// Rotation: 5 ///\r\n> protocols.docking.DockMCMCycle: /// Scorefunction: ///\r\n> protocols.docking.DockMCMCycle: ScoreFunction::show():\r\n> weights: (fa_atr 1) (fa_rep 0.55) (fa_sol 1) (fa_intra_rep 0.005) (fa_intra_sol_xover4 1) (lk_ball_wtd 1) (fa_elec 1) (pro_close 1.25) (hbond_sr_bb 1) (hbond_lr_bb 1) (hbond_bb_sc 1) (hbond_sc 1) (dslf_fa13 1.25) (omega 0.4) (fa_dun 0.7) (p_aa_pp 0.6) (yhh_planarity 0.625) (ref 1) (fa_water_to_bilayer 0.5) (rama_prepro 0.45)\r\n> analytic_etable_evaluation: 1\r\n> protocols.docking.DockMCMCycle: HbondOptions::show: mphbond: false\r\n> protocols.docking.DockMCMCycle: \r\n> protocols.docking.DockMCMCycle: \r\n> protocols.docking.DockMCMCycle: /// Packing scorefunction: ///\r\n> protocols.docking.DockMCMCycle: ScoreFunction::show():\r\n> weights: (fa_atr 1) (fa_rep 0.55) (fa_sol 1) (fa_intra_rep 0.005) (fa_intra_sol_xover4 1) (lk_ball_wtd 1) (fa_elec 1) (pro_close 1.25) (hbond_sr_bb 1) (hbond_lr_bb 1) (hbond_bb_sc 1) (hbond_sc 1) (dslf_fa13 1.25) (omega 0.4) (fa_dun 0.7) (p_aa_pp 0.6) (yhh_planarity 0.625) (ref 1) (fa_water_to_bilayer 0.5) (rama_prepro 0.45)\r\n> analytic_etable_evaluation: 1\r\n> protocols.docking.DockMCMCycle: HbondOptions::show: mphbond: false\r\n> protocols.docking.DockMCMCycle: \r\n> protocols.docking.DockMCMCycle: \r\n> protocols.docking.DockMCMCycle: ////////////////////////////////////////////////////////////////////////////////\r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.pack_rotamers: built 298 rotamers at 38 positions.\r\n> core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph\r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.pack_rotamers: built 142 rotamers at 24 positions.\r\n> core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph\r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.pack_rotamers: built 209 rotamers at 26 positions.\r\n> core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph\r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.pack_rotamers: built 209 rotamers at 26 positions.\r\n> core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph\r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.pack_rotamers: built 211 rotamers at 27 positions.\r\n> core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph\r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.pack_rotamers: built 211 rotamers at 27 positions.\r\n> core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph\r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> core.pack.task: Packer task: initialize from command line() \r\n> protocols.membrane.geometry.Embedding: Constructing Embedding object from topology and pose\r\n> protocols.membrane.geometry.Embedding: Computing membrane embedding from TMspans: \r\n> protocols.membrane.geometry.EmbeddingDef: Computing membrane embedding from TMspan 11 to 30\r\n> protocols.membrane.geometry.EmbeddingDef: Computing membrane embedding from TMspan 11 to 30\r\n> protocols.membrane.geometry.Embedding: Span Embedding: \r\n> protocols.membrane.geometry.EmbeddingDef: Embedding: center: (8.414411, -0.504606, 8.182107), normal: (-0.544146, 0.327191, 0.772562)\r\n> protocols.membrane.geometry.Embedding: Total Embedding: \r\n> protocols.membrane.geometry.EmbeddingDef: Embedding: center: (8.414411, -0.504606, 8.182107), normal: (-0.544146, 0.327191, 0.772562)\r\n> protocols.membrane.geometry.Embedding: Constructing Embedding object from topology and pose\r\n> protocols.membrane.geometry.Embedding: Computing membrane embedding from TMspans: \r\n> protocols.membrane.geometry.EmbeddingDef: Computing membrane embedding from TMspan 51 to 75\r\n> protocols.membrane.geometry.EmbeddingDef: Computing membrane embedding from TMspan 51 to 75\r\n> protocols.membrane.geometry.Embedding: Span Embedding: \r\n> protocols.membrane.geometry.EmbeddingDef: Embedding: center: (1.652306, -2.669647, 4.603335), normal: (-0.425672, 0.804568, 0.414094)\r\n> protocols.membrane.geometry.Embedding: Total Embedding: \r\n> protocols.membrane.geometry.EmbeddingDef: Embedding: center: (1.652306, -2.669647, 4.603335), normal: (-0.425672, 0.804568, 0.414094)\r\n> protocols.docking.DockingProtocol.metrics: trans_axis: (6.762105, 2.165041, 0.000000)\r\n> protocols.docking.DockingProtocol.metrics: unbound pose: \r\n> protocols.docking.DockingProtocol.metrics: \r\n> ------------------------------------------------------------\r\n> Scores Weight Raw Score Wghtd.Score\r\n> ------------------------------------------------------------\r\n> fa_atr 1.000 -365.494 -365.494\r\n> fa_rep 0.550 192.106 105.658\r\n> fa_sol 1.000 270.551 270.551\r\n> fa_intra_rep 0.005 244.065 1.220\r\n> fa_intra_sol_xover4 1.000 13.686 13.686\r\n> lk_ball_wtd 1.000 -9.271 -9.271\r\n> fa_elec 1.000 -90.907 -90.907\r\n> pro_close 1.250 7.477 9.347\r\n> hbond_sr_bb 1.000 -41.671 -41.671\r\n> hbond_lr_bb 1.000 -1.415 -1.415\r\n> hbond_bb_sc 1.000 -2.607 -2.607\r\n> hbond_sc 1.000 0.000 0.000\r\n> dslf_fa13 1.250 0.000 0.000\r\n> omega 0.400 6.577 2.631\r\n> fa_dun 0.700 102.984 72.089\r\n> p_aa_pp 0.600 -10.241 -6.145\r\n> yhh_planarity 0.625 0.000 0.000\r\n> ref 1.000 76.516 76.516\r\n> fa_water_to_bilayer 0.500 -87.604 -43.802\r\n> rama_prepro 0.450 59.285 26.678\r\n> ---------------------------------------------------\r\n> Total weighted score: 17.065\r\n> protocols.docking.DockingProtocol.metrics: bound pose: \r\n> protocols.docking.DockingProtocol.metrics: \r\n> ------------------------------------------------------------\r\n> Scores Weight Raw Score Wghtd.Score\r\n> ------------------------------------------------------------\r\n> fa_atr 1.000 -384.389 -384.389\r\n> fa_rep 0.550 198.839 109.361\r\n> fa_sol 1.000 263.043 263.043\r\n> fa_intra_rep 0.005 244.065 1.220\r\n> fa_intra_sol_xover4 1.000 13.686 13.686\r\n> lk_ball_wtd 1.000 -9.591 -9.591\r\n> fa_elec 1.000 -90.987 -90.987\r\n> pro_close 1.250 7.477 9.347\r\n> hbond_sr_bb 1.000 -41.671 -41.671\r\n> hbond_lr_bb 1.000 -1.415 -1.415\r\n> hbond_bb_sc 1.000 -2.607 -2.607\r\n> hbond_sc 1.000 0.000 0.000\r\n> dslf_fa13 1.250 0.000 0.000\r\n> omega 0.400 6.577 2.631\r\n> fa_dun 0.700 102.984 72.089\r\n> p_aa_pp 0.600 -10.241 -6.145\r\n> yhh_planarity 0.625 0.000 0.000\r\n> ref 1.000 76.516 76.516\r\n> fa_water_to_bilayer 0.500 -87.604 -43.802\r\n> rama_prepro 0.450 59.285 26.678\r\n> ---------------------------------------------------\r\n> Total weighted score: -6.035\r\n> protocols.docking.DockingProtocol.metrics: unbound energy: 17.0653\r\n> protocols.docking.DockingProtocol.metrics: bound energy: -6.03487\r\n> protocols.docking.DockingProtocol.metrics: interaction energy: -23.1002\r\n> protocols.docking.DockingProtocol.metrics: rb_jump: 1\r\n> protocols.membrane.geometry.Embedding: Constructing Embedding object from topology and pose\r\n> protocols.membrane.geometry.Embedding: Computing membrane embedding from TMspans: \r\n> protocols.membrane.geometry.EmbeddingDef: Computing membrane embedding from TMspan 11 to 30\r\n> protocols.membrane.geometry.EmbeddingDef: Computing membrane embedding from TMspan 11 to 30\r\n> protocols.membrane.geometry.Embedding: Span Embedding: \r\n> protocols.membrane.geometry.EmbeddingDef: Embedding: center: (8.414411, -0.504606, 8.182107), normal: (-0.544146, 0.327191, 0.772562)\r\n> protocols.membrane.geometry.Embedding: Total Embedding: \r\n> protocols.membrane.geometry.EmbeddingDef: Embedding: center: (8.414411, -0.504606, 8.182107), normal: (-0.544146, 0.327191, 0.772562)\r\n> protocols.membrane.geometry.Embedding: Constructing Embedding object from topology and pose\r\n> protocols.membrane.geometry.Embedding: Computing membrane embedding from TMspans: \r\n> protocols.membrane.geometry.EmbeddingDef: Computing membrane embedding from TMspan 51 to 75\r\n> protocols.membrane.geometry.EmbeddingDef: Computing membrane embedding from TMspan 51 to 75\r\n> protocols.membrane.geometry.Embedding: Span Embedding: \r\n> protocols.membrane.geometry.EmbeddingDef: Embedding: center: (1.652306, -2.669647, 4.603335), normal: (-0.425672, 0.804568, 0.414094)\r\n> protocols.membrane.geometry.Embedding: Total Embedding: \r\n> protocols.membrane.geometry.EmbeddingDef: Embedding: center: (1.652306, -2.669647, 4.603335), normal: (-0.425672, 0.804568, 0.414094)\r\n> protocols.docking.DockingProtocol.metrics: trans_axis: (6.762105, 2.165041, 0.000000)\r\n> protocols.docking.DockingProtocol.metrics: unbound pose: \r\n> protocols.docking.DockingProtocol.metrics: \r\n> ------------------------------------------------------------\r\n> Scores Weight Raw Score Wghtd.Score\r\n> ------------------------------------------------------------\r\n> fa_atr 1.000 -365.494 -365.494\r\n> fa_rep 0.550 192.106 105.658\r\n> fa_sol 1.000 270.551 270.551\r\n> fa_intra_rep 0.005 244.065 1.220\r\n> fa_intra_sol_xover4 1.000 13.686 13.686\r\n> lk_ball_wtd 1.000 -9.271 -9.271\r\n> fa_elec 1.000 -90.907 -90.907\r\n> pro_close 1.250 7.477 9.347\r\n> hbond_sr_bb 1.000 -41.671 -41.671\r\n> hbond_lr_bb 1.000 -1.415 -1.415\r\n> hbond_bb_sc 1.000 -2.607 -2.607\r\n> hbond_sc 1.000 0.000 0.000\r\n> dslf_fa13 1.250 0.000 0.000\r\n> omega 0.400 6.577 2.631\r\n> fa_dun 0.700 102.984 72.089\r\n> p_aa_pp 0.600 -10.241 -6.145\r\n> yhh_planarity 0.625 0.000 0.000\r\n> ref 1.000 76.516 76.516\r\n> fa_water_to_bilayer 0.500 -87.604 -43.802\r\n> rama_prepro 0.450 59.285 26.678\r\n> ---------------------------------------------------\r\n> Total weighted score: 17.065\r\n> protocols.docking.DockingProtocol.metrics: bound pose: \r\n> protocols.docking.DockingProtocol.metrics: \r\n> ------------------------------------------------------------\r\n> Scores Weight Raw Score Wghtd.Score\r\n> ------------------------------------------------------------\r\n> fa_atr 1.000 -384.389 -384.389\r\n> fa_rep 0.550 198.839 109.361\r\n> fa_sol 1.000 263.043 263.043\r\n> fa_intra_rep 0.005 244.065 1.220\r\n> fa_intra_sol_xover4 1.000 13.686 13.686\r\n> lk_ball_wtd 1.000 -9.591 -9.591\r\n> fa_elec 1.000 -90.987 -90.987\r\n> pro_close 1.250 7.477 9.347\r\n> hbond_sr_bb 1.000 -41.671 -41.671\r\n> hbond_lr_bb 1.000 -1.415 -1.415\r\n> hbond_bb_sc 1.000 -2.607 -2.607\r\n> hbond_sc 1.000 0.000 0.000\r\n> dslf_fa13 1.250 0.000 0.000\r\n> omega 0.400 6.577 2.631\r\n> fa_dun 0.700 102.984 72.089\r\n> p_aa_pp 0.600 -10.241 -6.145\r\n> yhh_planarity 0.625 0.000 0.000\r\n> ref 1.000 76.516 76.516\r\n> fa_water_to_bilayer 0.500 -87.604 -43.802\r\n> rama_prepro 0.450 59.285 26.678\r\n> ---------------------------------------------------\r\n> Total weighted score: -6.035\r\n> protocols.docking.DockingProtocol.metrics: unbound energy: 17.0653\r\n> protocols.docking.DockingProtocol.metrics: bound energy: -6.03487\r\n> protocols.docking.DockingProtocol.metrics: interaction energy: -23.1002\r\n> protocols.docking.DockingProtocol.metrics: rb_jump: 1\r\n> protocols.docking.membrane.MPDockingMover: Final foldtree: Is membrane fixed? 1\r\n> protocols.docking.membrane.MPDockingMover: Edge \t Jump Jump #\r\n> \t0086--0001 002\r\n> 0001--0042\r\n> \t0001--0043 001\r\n> 0043--0085\r\n284d2054\r\n< protocols.jd2.JobDistributor: [ WARNING ] 2k9j_AB_fa19_0001 reported failure and will NOT retry\r\n286,291c2056,2057\r\n< \r\n< ---------------------------------------------------------------\r\n< [ ERROR ]: Error(s) were encountered when running jobs.\r\n< 1 jobs failed;\r\n< Check the output further up for additional error messages.\r\n< ---------------------------------------------------------------\r\n---\r\n> protocols.jd2.JobDistributor: [ WARNING ] The following options have been set, but have not yet been used:\r\n> \t-out:pdb_gz \r\nOnly in /home/benchmark/working_dir/master:62021/mp_dock_ensemble: ROSETTA_CRASH.log\r\nOnly in /home/benchmark/working_dir/master:62021/mp_dock_ensemble: .test_did_not_run.log\r\n", "state": "failed" }, "mp_dock_prepack": { "log": "", "state": "passed" }, "mp_dock_setup": { "log": "", "state": "passed" }, "mp_domain_assembly": { "log": "", "state": "passed" }, "mp_domain_assembly_FtsQ": { "log": "", "state": "passed" }, "mp_find_interface": { "log": "", "state": "passed" }, "mp_interface_statistics": { "log": "", "state": "passed" }, "mp_ligand_interface": { "log": "", "state": "passed" }, "mp_loadtime": { "log": "", "state": "passed" }, "mp_mutate_relax": { "log": "", "state": "passed" }, "mp_mutate_repack": { "log": "", "state": "passed" }, "mp_quick_relax": { "log": "", "state": "passed" }, "mp_quick_relax_ref2015_memb": { "log": "", "state": "passed" }, "mp_range_relax": { "log": "", "state": "passed" }, "mp_relax": { "log": "", "state": "passed" }, "mp_relax_w_ligand": { "log": "", "state": "passed" }, "mp_score_jd2": { "log": "", "state": "passed" }, "mp_span_ang_ref2015_memb": { "log": "", "state": "passed" }, "mp_span_from_pdb": { "log": "", "state": "passed" }, "mp_symdock": { "log": "", "state": "passed" }, "mp_symmetry_load": { "log": "", "state": "passed" }, "mp_transform": { "log": "", "state": "passed" }, "mp_transform_optimize": { "log": "", "state": "passed" }, "mp_vis_emb": { "log": "", "state": "passed" }, "mpi_multistate_design": { "log": "", "state": "passed" }, "mpi_simple_cycpep_predict": { "log": "", "state": "passed" }, "mpi_simple_cycpep_predict_4level": { "log": "", "state": "passed" }, "mpi_simple_cycpep_predict_computing_pnear_to_all": { "log": "", "state": "passed" }, "mpil_find_pore_ahelical": { "log": "", "state": "passed" }, "mpil_find_pore_bbarrel": { "log": "", "state": "passed" }, "mpil_load_implicit_lipids": { "log": "", "state": "passed" }, "mr_protocols": { "log": "", "state": "passed" }, "multistage_rosetta_scripts": { "log": "", "state": "passed" }, "multistage_rosetta_scripts_clustering": { "log": "", "state": "passed" }, "multithreaded_fastdesign": { "log": "", "state": "passed" }, "multithreaded_fixbb": { "log": "", "state": "passed" }, "multithreaded_interaction_graph_accuracy": { "log": "", "state": "passed" }, "multithreaded_interaction_graph_accuracy_symm": { "log": "", "state": "passed" }, "multithreaded_packrotamersmover": { "log": "", "state": "passed" }, "mutate": { "log": "", "state": "passed" }, "ncaa_fixbb": { "log": "", "state": "passed" }, "ncbb_packer_palette": { "log": "", "state": "passed" }, "netcharge_design": { "log": "", "state": "passed" }, "netcharge_design_symm": { "log": "", "state": "passed" }, "next_generation_KIC": { "log": "", "state": "passed" }, "noe_assignment": { "log": "", "state": "passed" }, "non-canonical_connectivities": { "log": "", "state": "passed" }, "nonideal_rtmin": { "log": "", "state": "passed" }, "nucleobase_sample_around": { "log": "", "state": "passed" }, "number_of_residuetypes": { "log": "", "state": "passed" }, "oligourea_design": { "log": "", "state": "passed" }, "oligourea_predict": { "log": "", "state": "passed" }, "oop_create": { "log": "", "state": "passed" }, "oop_design": { "log": "", "state": "passed" }, "oop_dock_design": { "log": "", "state": "passed" }, "orbitals": { "log": "", "state": "passed" }, "output_schema": { "log": "", "state": "passed" }, "pH_mode": { "log": "", "state": "passed" }, "pepspec": { "log": "", "state": "passed" }, "pepspec_anchor_dock": { "log": "", "state": "passed" }, "peptiderive": { "log": "", "state": "passed" }, "per_residue_energies": { "log": "", "state": "passed" }, "per_residue_sc_sasa": { "log": "", "state": "passed" }, "per_residue_solvent_exposure": { "log": "", "state": "passed" }, "pertmin": { "log": "", "state": "passed" }, "perturb_helical_bundle": { "log": "", "state": "passed" }, "perturb_helical_bundle_copying_pitch": { "log": "", "state": "passed" }, "perturb_helical_bundle_epsilon": { "log": "", "state": "passed" }, "perturb_helical_bundle_setting": { "log": "", "state": "passed" }, "perturb_helical_bundle_z_offset": { "log": "", "state": "passed" }, "phiselector": { "log": "", "state": "passed" }, "phosphonate": { "log": "", "state": "passed" }, "phosphorylation": { 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