{
"compared_with_test": {
"full_name": "linux.clang.tensorflow.integration.tensorflow",
"name": "integration.tensorflow",
"platform": {
"compiler": "clang",
"extras": [
"tensorflow"
],
"os": "linux"
},
"platform_as_string": "linux.clang.tensorflow",
"revision": {
"branch": "master",
"revision_id": 61992
},
"state": "failed",
"test_id": 794493
},
"summary": {
"failed": 1,
"failed_tests": [
"tensorflow_manager"
],
"total": 19
},
"tests": {
"abinitio_with_trRosetta": {
"log": "",
"state": "passed"
},
"basic_gcn_tensorflow_test": {
"log": "",
"state": "passed"
},
"database_md5": {
"log": "",
"state": "passed"
},
"smart_annealer": {
"log": "",
"state": "passed"
},
"tensorflow_connection_test": {
"log": "",
"state": "passed"
},
"tensorflow_manager": {
"log": "Brief Diff:\nFiles /home/benchmark/working_dir/master:61992/tensorflow_manager/log and /home/benchmark/working_dir/master:61993/tensorflow_manager/log differ\r\nOnly in /home/benchmark/working_dir/master:61992/tensorflow_manager: ROSETTA_CRASH.log\r\nOnly in /home/benchmark/working_dir/master:61992/tensorflow_manager: .test_did_not_run.log\r\n\n\nFull Diff:\ndiff -r '--exclude=command.sh' '--exclude=command.mpi.sh' '--exclude=observers' '--exclude=*.ignore' /home/benchmark/working_dir/master:61992/tensorflow_manager/log /home/benchmark/working_dir/master:61993/tensorflow_manager/log\r\n62,96c62,74\r\n< \r\n< ERROR: MISMATCH!!!\tOriginal[2](1):\t-nan\tCombined(1+1):\t-nan\r\n< \r\n< \r\n< Error in RosettaTensorflowTensorContainer< T >::combine_tensors(): Failed to copy tensor properly! See error messages above.\r\n< ERROR:: Exit from: src/basic/tensorflow_manager/RosettaTensorflowTensorContainer.tmpl.hh line: 313\r\n< \r\n< [ ERROR ]: Caught exception:\r\n< \r\n< \r\n< File: src/basic/tensorflow_manager/RosettaTensorflowTensorContainer.tmpl.hh:313\r\n< [ ERROR ] UtilityExitException\r\n< ERROR: MISMATCH!!!\tOriginal[2](1):\t-nan\tCombined(1+1):\t-nan\r\n< \r\n< \r\n< Error in RosettaTensorflowTensorContainer< T >::combine_tensors(): Failed to copy tensor properly! See error messages above.\r\n< \r\n< \r\n< ------------------------ Begin developer's backtrace ------------------------- \r\n< BACKTRACE:\r\n< ROSETTA/source/build/src/debug/linux/3.10/64/x86/clang/3.4/tensorflow/libutility.so(backtrace_string(int)+0x41) [0x7f403cd84d01]\r\n< ROSETTA/source/build/src/debug/linux/3.10/64/x86/clang/3.4/tensorflow/libutility.so(utility::excn::Exception::Exception(char const*, int, std::string const&)+0xb1) [0x7f403cdc5501]\r\n< ROSETTA/source/build/src/debug/linux/3.10/64/x86/clang/3.4/tensorflow/libutility.so(utility::UtilityExitException::UtilityExitException(char const*, int, std::string const&)+0x7e) [0x7f403cd8864e]\r\n< ROSETTA/source/build/src/debug/linux/3.10/64/x86/clang/3.4/tensorflow/libutility.so(utility::exit(char const*, int, std::string const&, int)+0x56) [0x7f403cd88246]\r\n< ROSETTA/source/bin/tensorflow_manager_multi_input_test.tensorflow.linuxclangdebug() [0x425588]\r\n< ROSETTA/source/bin/tensorflow_manager_multi_input_test.tensorflow.linuxclangdebug() [0x4243dd]\r\n< ROSETTA/source/bin/tensorflow_manager_multi_input_test.tensorflow.linuxclangdebug() [0x42342a]\r\n< ROSETTA/source/bin/tensorflow_manager_multi_input_test.tensorflow.linuxclangdebug() [0x420781]\r\n< ROSETTA/source/bin/tensorflow_manager_multi_input_test.tensorflow.linuxclangdebug() [0x421640]\r\n< /lib64/libc.so.6(__libc_start_main+0xf5) [0x7f402f61d555]\r\n< ROSETTA/source/bin/tensorflow_manager_multi_input_test.tensorflow.linuxclangdebug() [0x41d2e3]\r\n< ------------------------- End developer's backtrace -------------------------- \r\n< \r\n< \r\n< AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS.\r\n---\r\n> apps.pilot.jackmaguire.tensorflow_manager_multi_input_test: Output from model: 0.5004\tExpected: 0.5004\tPASSED\r\n> apps.pilot.jackmaguire.tensorflow_manager_multi_input_test: Output from model: 0.40971\tExpected: 0.40971\tPASSED\r\n> apps.pilot.jackmaguire.tensorflow_manager_multi_input_test: Output from model: 0.4043\tExpected: 0.4043\tPASSED\r\n> apps.pilot.jackmaguire.tensorflow_manager_multi_input_test: Output from model: 0.33565\tExpected: 0.33565\tPASSED\r\n> apps.pilot.jackmaguire.tensorflow_manager_multi_input_test: Output from model: 0.71121\tExpected: 0.71121\tPASSED\r\n> apps.pilot.jackmaguire.tensorflow_manager_multi_input_test: Success!\r\n> basic.citation_manager.CitationManager: \r\n> The following UNPUBLISHED Rosetta modules were used during this run of Rosetta. Their authors should be included in the author list when this work is published:\r\n> \r\n> RosettaTensorflowManager Singleton's author(s):\r\n> Vikram K. Mulligan, Systems Biology, Center for Computational Biology, Flatiron Institute [vmulligan@flatironinstitute.org] (Created the RosettaTensorflowManager.)\r\n> Jack Magure, Menten AI [jack.maguire@menten.ai] (Expanded RosettaTensorflowManager capabilities for multi-head jobs and wrote tests.)\r\n> Sergey Lyskov, Gray Lab, Department of Chemical & Biomolecular Engineering, Johns Hopkins University [Sergey.Lyskov@jhu.edu] (Added testing infrastructure and helped to create the Rosetta-Tensorflow linked build.)\r\nOnly in /home/benchmark/working_dir/master:61992/tensorflow_manager: ROSETTA_CRASH.log\r\nOnly in /home/benchmark/working_dir/master:61992/tensorflow_manager: .test_did_not_run.log\r\n",
"state": "failed"
},
"tensorflow_simple_model_load_and_evaluate": {
"log": "",
"state": "passed"
},
"trRosetta": {
"log": "",
"state": "passed"
},
"trRosettaConstraintGenerator": {
"log": "",
"state": "passed"
},
"trRosettaConstraintGenerator_rosettascripts": {
"log": "",
"state": "passed"
},
"trRosettaProtocolMover": {
"log": "",
"state": "passed"
},
"trRosettaProtocolMover_rosettascripts": {
"log": "",
"state": "passed"
},
"trRosettaProtocolMover_rosettascripts_diskwrite": {
"log": "",
"state": "passed"
},
"trRosettaProtocolMover_rosettascripts_diskwrite_only": {
"log": "",
"state": "passed"
},
"trRosetta_test_predict": {
"log": "",
"state": "passed"
},
"trRosetta_test_predict_ubiquitin": {
"log": "",
"state": "passed"
},
"trRosetta_test_predict_ubiquitin_cst_file_write": {
"log": "",
"state": "passed"
},
"trRosetta_test_predict_ubiquitin_cst_file_write_only": {
"log": "",
"state": "passed"
},
"trRosetta_test_predict_ubiquitin_init_by_bins": {
"log": "",
"state": "passed"
}
}
}