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"interactive:BinaryStreamTests": {
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"state": "passed"
},
"interactive:BindFunctionTests": {
"log": "",
"state": "passed"
},
"interactive:BuriedUnsatisfiedPolarsCalculatorTests": {
"log": "",
"state": "passed"
},
"interactive:COWDataTests": {
"log": "",
"state": "passed"
},
"interactive:DictionaryTests": {
"log": "",
"state": "passed"
},
"interactive:DistogramTests": {
"log": "",
"state": "passed"
},
"interactive:DofTetherSetupTests": {
"log": "",
"state": "passed"
},
"interactive:FilterTests": {
"log": "Running interactive:FilterTests unit tests...\nRunning 11 tests\nTest suite: FilterTests (../../source/test/interactive/util/filter/Filter.cxxtest.hh)\n\n\n\n***** TEST FilterTests test_aa_restriction_filter *****\n\n\n\nGL INIT WAS CALLED!!!\nUsing OpenGl version 3.1 Mesa 21.2.6\nSetting up filter test\nLoading pose '0000993686.ir_puzzle.pdb'\nLoading filters dictionary file 'aarestriction.filters'\nCreating filter\nInitializing WrappedPose\nScoring pose\nApplying filter 'Amino Acid Restriction'\nTesting results of filter Amino Acid Restriction\nExpected is_bonus: 0\nExpected is_satisfied: 0\nExpected detail: \nExpected summary: GLY: exceeds static limit of 2 by 2\n is_bonus: 0\n is_satisfied: 0\n detail: \n summary: GLY: exceeds static limit of 2 by 2\n\n\n\n***** TEST FilterTests test_abego_filter *****\n\n\n\nGL INIT WAS CALLED!!!\nUsing OpenGl version 3.1 Mesa 21.2.6\nSetting up filter test\nLoading pose '2011852_y8478.pdb'\nLoading filters dictionary file 'abego.filters'\nCreating filter\nInitializing WrappedPose\nScoring pose\nApplying filter 'Ideal Loops'\nTesting results of filter Ideal Loops\nExpected is_bonus: 1\nExpected is_satisfied: 1\nExpected detail: See the Blueprint tool for examples of Ideal Loops.\nExpected summary: Found 1 non-ideal loops (click SHOW to highlight)\n is_bonus: 1\n is_satisfied: 1\n detail: See the Blueprint tool for examples of Ideal Loops.\n summary: Found 1 non-ideal loops (click SHOW to highlight)\n bonus: -40\n\n\n\n***** TEST FilterTests test_buns_filter *****\n\n\n\nGL INIT WAS CALLED!!!\nUsing OpenGl version 3.1 Mesa 21.2.6\nSetting up filter test\nLoading pose '2011852_y8478.pdb'\nLoading filters dictionary file 'buns.filters'\nCreating filter\nInitializing WrappedPose\nScoring pose\nApplying filter 'Buried Unsats'\nTesting results of filter Buried Unsats\nExpected is_bonus: 1\nExpected is_satisfied: 1\nExpected detail: Buried unsatisfied atoms (BUNS) need to make hydrogen bonds.\nCreate a bond between a red and blue atom to satisfy these atoms!\nExpected summary: 6 buried polars found. (Click SHOW to highlight)\n is_bonus: 1\n is_satisfied: 1\n detail: Buried unsatisfied atoms (BUNS) need to make hydrogen bonds.\nCreate a bond between a red and blue atom to satisfy these atoms!\n summary: 6 buried polars found. (Click SHOW to highlight)\n bonus: 10\n\n\n\n***** TEST FilterTests test_contactms_filter *****\n\n\n\nGL INIT WAS CALLED!!!\nUsing OpenGl version 3.1 Mesa 21.2.6\nSetting up filter test\nLoading pose '2011852_y8478.pdb'\nLoading filters dictionary file 'contactms.filters'\nCreating filter\nInitializing WrappedPose\nScoring pose\nApplying filter 'Contact Surface'\nTesting results of filter Contact Surface\nExpected is_bonus: 1\nExpected is_satisfied: 1\nExpected detail: Target value is 500 or greater. Optimize binding interactions to improve contact molecular surface.\nExpected summary: Calculated: 429\n is_bonus: 1\n is_satisfied: 1\n detail: Target value is 500 or greater. Optimize binding interactions to improve contact molecular surface.\n summary: Calculated: 429\n bonus: -171.455\n\n\n\n***** TEST FilterTests test_ddg_filter *****\n\n\n\nGL INIT WAS CALLED!!!\nUsing OpenGl version 3.1 Mesa 21.2.6\nSetting up filter test\nLoading pose '2011852_y8478.pdb'\nLoading filters dictionary file 'ddg.filters'\nCreating filter\nInitializing WrappedPose\nScoring pose\nApplying filter 'DDG'\nTesting results of filter DDG\nExpected is_bonus: 1\nExpected is_satisfied: 1\nExpected detail: Target DDG is -40 or less. Optimize binding interactions to improve DDG.\nExpected summary: Calculated DDG: -38.4 kcal/mol.\n is_bonus: 1\n is_satisfied: 1\n detail: Target DDG is -40 or less. Optimize binding interactions to improve DDG.\n summary: Calculated DDG: -38.4 kcal/mol.\n bonus: -191.96\n\n\n\n***** TEST FilterTests test_disulfide_filter *****\n\n\n\nGL INIT WAS CALLED!!!\nUsing OpenGl version 3.1 Mesa 21.2.6\nSetting up filter test\nLoading pose '0000994455.ir_puzzle.pdb'\nLoading filters dictionary file 'disulfide.filters'\nCreating filter\nInitializing WrappedPose\nScoring pose\nApplying filter 'Disulfide Count'\nTesting results of filter Disulfide Count\nExpected is_bonus: 1\nExpected is_satisfied: 1\nExpected detail: Connect more yellow-tipped sidechains to create disulfide bonds! \nExpected summary: 0 disulfide bond(s) created (too few).\n is_bonus: 1\n is_satisfied: 1\n detail: Connect more yellow-tipped sidechains to create disulfide bonds! \n summary: 0 disulfide bond(s) created (too few).\n bonus: 0\n\n\n\n***** TEST FilterTests test_dssp_filter *****\n\n\n\nGL INIT WAS CALLED!!!\nUsing OpenGl version 3.1 Mesa 21.2.6\nSetting up filter test\nLoading pose '2012327_u0027.pdb'\nLoading filters dictionary file 'dssp.filters'\nCreating filter\nInitializing WrappedPose\nScoring pose\n\nERROR: Assertion `static_cast< size_type >( i - l_ ) < super::size()` failed.\nERROR:: Exit from: ../../src/utility/vectorL.hh line: 420\n\n ------------------------ Begin developer's backtrace ------------------------- \nBACKTRACE:\n../build_debug/bin/all.test(+0x789ea37) [0x55dce9d27a37]\n../build_debug/bin/all.test(+0x789e034) [0x55dce9d27034]\n../build_debug/bin/all.test(+0x789db58) [0x55dce9d26b58]\n../build_debug/bin/all.test(+0xe6d5d6) [0x55dce32f65d6]\n../build_debug/bin/all.test(+0x78bb4b8) [0x55dce9d444b8]\n../build_debug/bin/all.test(+0x78ba873) [0x55dce9d43873]\n../build_debug/bin/all.test(+0x78ba62b) [0x55dce9d4362b]\n../build_debug/bin/all.test(+0x78ba284) [0x55dce9d43284]\n../build_debug/bin/all.test(+0x6645181) [0x55dce8ace181]\n../build_debug/bin/all.test(+0x6643487) [0x55dce8acc487]\n../build_debug/bin/all.test(+0x6642989) [0x55dce8acb989]\n../build_debug/bin/all.test(+0x6641d60) [0x55dce8acad60]\n../build_debug/bin/all.test(+0x6640c4a) [0x55dce8ac9c4a]\n../build_debug/bin/all.test(+0x663fa2e) [0x55dce8ac8a2e]\n../build_debug/bin/all.test(+0x663e5e3) [0x55dce8ac75e3]\n../build_debug/bin/all.test(+0x663cff6) [0x55dce8ac5ff6]\n../build_debug/bin/all.test(+0x663b593) [0x55dce8ac4593]\n../build_debug/bin/all.test(+0x663284c) [0x55dce8abb84c]\n../build_debug/bin/all.test(+0x6643637) [0x55dce8acc637]\n../build_debug/bin/all.test(+0x6642b0b) [0x55dce8acbb0b]\n../build_debug/bin/all.test(+0x6642106) [0x55dce8acb106]\n../build_debug/bin/all.test(+0x6641106) [0x55dce8aca106]\n../build_debug/bin/all.test(+0x663fd7c) [0x55dce8ac8d7c]\n../build_debug/bin/all.test(+0x663e969) [0x55dce8ac7969]\n../build_debug/bin/all.test(+0x663d4fa) [0x55dce8ac64fa]\n../build_debug/bin/all.test(+0x663b798) [0x55dce8ac4798]\n../build_debug/bin/all.test(+0x6633350) [0x55dce8abc350]\n../build_debug/bin/all.test(+0x645b603) [0x55dce88e4603]\n../build_debug/bin/all.test(+0x645aefc) [0x55dce88e3efc]\n../build_debug/bin/all.test(+0x1d70032) [0x55dce41f9032]\n../build_debug/bin/all.test(+0x1d7091d) [0x55dce41f991d]\n../build_debug/bin/all.test(+0x21a04e5) [0x55dce46294e5]\n../build_debug/bin/all.test(+0x21a07b7) [0x55dce46297b7]\n/lib/x86_64-linux-gnu/libpthread.so.0(+0x8609) [0x7f6470aec609]\n/lib/x86_64-linux-gnu/libc.so.6(clone+0x43) [0x7f6470681133]\n ------------------------- End developer's backtrace -------------------------- \nall.test: ../../src/utility/vectorL.hh:420: utility::vectorL<<anonymous>, T, A>::const_reference utility::vectorL<<anonymous>, T, A>::operator[](utility::vectorL<<anonymous>, T, A>::index_type) const [with long int L = 1; T = utility::graph::Node*; A = std::allocator<utility::graph::Node*>; utility::vectorL<<anonymous>, T, A>::const_reference = utility::graph::Node* const&; utility::vectorL<<anonymous>, T, A>::index_type = long unsigned int]: Assertion `( static_cast< size_type >( i - l_ ) < super::size() ) || handle_assert_failure( \"static_cast< size_type >( i - l_ ) < super::size()\", __FILE__, __LINE__ )' failed.\n",
"state": "failed"
},
"interactive:GeneralUtilTests": {
"log": "",
"state": "passed"
},
"interactive:MathUtilTests": {
"log": "",
"state": "passed"
},
"interactive:Md5UtilTests": {
"log": "",
"state": "passed"
},
"interactive:RareyRotamerLibraryTests": {
"log": "",
"state": "passed"
},
"interactive:RayTests": {
"log": "",
"state": "passed"
},
"interactive:Rc4UtilTests": {
"log": "",
"state": "passed"
},
"interactive:RosettaGamePoseTests": {
"log": "",
"state": "passed"
},
"interactive:RosettaUtilTests": {
"log": "",
"state": "passed"
},
"interactive:ToolActionLimitTests": {
"log": "",
"state": "passed"
},
"interactive:WrappedPoseTests": {
"log": "",
"state": "passed"
},
"numeric:AngleFunctionTests": {
"log": "",
"state": "passed"
},
"numeric:BicubicSpline_tests": {
"log": "",
"state": "passed"
},
"numeric:BoundingBoxTests": {
"log": "",
"state": "passed"
},
"numeric:CalculatorTest": {
"log": "",
"state": "passed"
},
"numeric:ClusteringTreeNodeTest": {
"log": "",
"state": "passed"
},
"numeric:ColorUtilTests": {
"log": "",
"state": "passed"
},
"numeric:ConversionsTests": {
"log": "",
"state": "passed"
},
"numeric:CubicSpline_tests": {
"log": "",
"state": "passed"
},
"numeric:DiscreteIntervalEncodingTreeTests": {
"log": "",
"state": "passed"
},
"numeric:DistributionSamplerTest": {
"log": "",
"state": "passed"
},
"numeric:EulerAnglesTests": {
"log": "",
"state": "passed"
},
"numeric:FFTTests": {
"log": "",
"state": "passed"
},
"numeric:GeneralizedEigenSolverTests": {
"log": "",
"state": "passed"
},
"numeric:HistogramTests": {
"log": "",
"state": "passed"
},
"numeric:HomogenousTransformTests": {
"log": "",
"state": "passed"
},
"numeric:InterpolateTest": {
"log": "",
"state": "passed"
},
"numeric:KDTreeTests": {
"log": "",
"state": "passed"
},
"numeric:MathMatrix_serialization": {
"log": "",
"state": "passed"
},
"numeric:MathNTensorIOTests": {
"log": "",
"state": "passed"
},
"numeric:MathNTensorTests": {
"log": "",
"state": "passed"
},
"numeric:MinimalClashHashTest": {
"log": "",
"state": "passed"
},
"numeric:MultiDimensionalHistogramTests": {
"log": "",
"state": "passed"
},
"numeric:NumericFunctionsTests": {
"log": "",
"state": "passed"
},
"numeric:NumericUtilTests": {
"log": "",
"state": "passed"
},
"numeric:OneDHistogramTests": {
"log": "",
"state": "passed"
},
"numeric:PCATests": {
"log": "",
"state": "passed"
},
"numeric:PolycubicSplineTests": {
"log": "",
"state": "passed"
},
"numeric:ProbUtil": {
"log": "",
"state": "passed"
},
"numeric:QuaternionTests": {
"log": "",
"state": "passed"
},
"numeric:RandomSystemTests": {
"log": "",
"state": "passed"
},
"numeric:ReservoirSamplingTests": {
"log": "",
"state": "passed"
},
"numeric:RingPlaneFunctionsTests": {
"log": "",
"state": "passed"
},
"numeric:SphericalVectorTests": {
"log": "",
"state": "passed"
},
"numeric:StatisticsFunctionsTests": {
"log": "",
"state": "passed"
},
"numeric:TricubicSplineTests": {
"log": "",
"state": "passed"
},
"numeric:TwoDHistogramTests": {
"log": "",
"state": "passed"
},
"numeric:VoxelArrayTest": {
"log": "",
"state": "passed"
},
"numeric:VoxelGridTests": {
"log": "",
"state": "passed"
},
"numeric:WeightedReservoirSamplerTest": {
"log": "",
"state": "passed"
},
"numeric:WeightedSamplerTests": {
"log": "",
"state": "passed"
},
"numeric:WrapAnglesTest": {
"log": "",
"state": "passed"
},
"numeric:XYZFunctionsTests": {
"log": "",
"state": "passed"
},
"numeric:XYZMatrixTests": {
"log": "",
"state": "passed"
},
"numeric:XYZTransformTests": {
"log": "",
"state": "passed"
},
"numeric:XYZTripleTests": {
"log": "",
"state": "passed"
},
"numeric:XYZVectorTests": {
"log": "",
"state": "passed"
},
"numeric:agglomerative_hierarchical_clusteringTest": {
"log": "",
"state": "passed"
},
"numeric:bicubic_interpolation_function_tests": {
"log": "",
"state": "passed"
},
"numeric:bridgeObjectsTests": {
"log": "",
"state": "passed"
},
"numeric:minimum_bounding_ellipse": {
"log": "",
"state": "passed"
},
"numeric:polycubic_catmull_rom_Tests": {
"log": "",
"state": "passed"
},
"numeric:random_functionsTests": {
"log": "",
"state": "passed"
},
"numeric:random_xyzTests": {
"log": "",
"state": "passed"
},
"standalone:OpenPDBinStandaloneTests": {
"log": "",
"state": "passed"
},
"standalone:ProfanityFilterTests": {
"log": "",
"state": "passed"
},
"utility:ArrayPoolTests": {
"log": "",
"state": "passed"
},
"utility:AutoKeyTests": {
"log": "",
"state": "passed"
},
"utility:BitSetTests": {
"log": "",
"state": "passed"
},
"utility:BitVectorTests": {
"log": "",
"state": "passed"
},
"utility:BufferedSignalHubTests": {
"log": "",
"state": "passed"
},
"utility:DatabaseSessionManagerTests": {
"log": "",
"state": "passed"
},
"utility:DatingUtilitiesTests": {
"log": "",
"state": "passed"
},
"utility:DeepCopyOPTests": {
"log": "",
"state": "passed"
},
"utility:DeepCopyVector1Tests": {
"log": "",
"state": "passed"
},
"utility:DenseBoolMapTests": {
"log": "",
"state": "passed"
},
"utility:DisjointSetsTests": {
"log": "",
"state": "passed"
},
"utility:FactoryTests": {
"log": "",
"state": "passed"
},
"utility:FileContentsMapTests": {
"log": "",
"state": "passed"
},
"utility:FileNameTests": {
"log": "",
"state": "passed"
},
"utility:FileSysUtilTests": {
"log": "",
"state": "passed"
},
"utility:GraphTests": {
"log": "",
"state": "passed"
},
"utility:IZStreamTests": {
"log": "",
"state": "passed"
},
"utility:IterUtilTest": {
"log": "",
"state": "passed"
},
"utility:Key4TupleTests": {
"log": "",
"state": "passed"
},
"utility:Key4VectorTests": {
"log": "",
"state": "passed"
},
"utility:KeyMapTests": {
"log": "",
"state": "passed"
},
"utility:KeyVectorTests": {
"log": "",
"state": "passed"
},
"utility:LexicographicalIteratorTests": {
"log": "",
"state": "passed"
},
"utility:LowMemGraphTests": {
"log": "",
"state": "passed"
},
"utility:MinMaxTest": {
"log": "",
"state": "passed"
},
"utility:OptionCollectionTests": {
"log": "",
"state": "passed"
},
"utility:OrderedTupleTests": {
"log": "",
"state": "passed"
},
"utility:PathNameTests": {
"log": "",
"state": "passed"
},
"utility:PausableSignalHubTests": {
"log": "",
"state": "passed"
},
"utility:ReadWriteMutexTests": {
"log": "",
"state": "passed"
},
"utility:RecentHistoryQueueTests": {
"log": "",
"state": "passed"
},
"utility:RingDetectionTests": {
"log": "",
"state": "passed"
},
"utility:SignalHubTests": {
"log": "",
"state": "passed"
},
"utility:SimulateMPITests": {
"log": "",
"state": "passed"
},
"utility:SmallKeyMapTests": {
"log": "",
"state": "passed"
},
"utility:SmallKeyVectorTests": {
"log": "",
"state": "passed"
},
"utility:SmallVector1_Tests": {
"log": "",
"state": "passed"
},
"utility:SortFunctionsTest": {
"log": "",
"state": "passed"
},
"utility:StringUtilTests": {
"log": "",
"state": "passed"
},
"utility:TagTests": {
"log": "",
"state": "passed"
},
"utility:TokenHubTests": {
"log": "",
"state": "passed"
},
"utility:UToolsTests": {
"log": "",
"state": "passed"
},
"utility:UTracerTests": {
"log": "",
"state": "passed"
},
"utility:UserKeyTests": {
"log": "",
"state": "passed"
},
"utility:UtilityNumbersTests": {
"log": "",
"state": "passed"
},
"utility:Vector0Tests": {
"log": "",
"state": "passed"
},
"utility:Vector1BoolTests": {
"log": "",
"state": "passed"
},
"utility:Vector1FunctionsTests": {
"log": "",
"state": "passed"
},
"utility:Vector1_Tests": {
"log": "",
"state": "passed"
},
"utility:VectorLTests": {
"log": "",
"state": "passed"
},
"utility:XMLSchemaGenerationTests": {
"log": "",
"state": "passed"
},
"utility:XMLSchemaValidationTests": {
"log": "",
"state": "passed"
},
"utility:ZipStreamTests": {
"log": "",
"state": "passed"
},
"utility:heapTests": {
"log": "",
"state": "passed"
},
"utility:in_place_listTests": {
"log": "",
"state": "passed"
},
"utility:integer_mappingTests": {
"log": "",
"state": "passed"
},
"utility:json_utilitiesTests": {
"log": "",
"state": "passed"
},
"utility:make_shared_Tests": {
"log": "",
"state": "passed"
},
"utility:type_traits_Tests": {
"log": "",
"state": "passed"
}
}
}