Integration test "simple_cycpep_predict_terminal_disulfide_tails_2"
Author
Vikram K. Mulligan, Flatiron Institute (vmulligan@flatironinstitute.org).
Description
Integration test for the simple_cycpep_predict pilot app when used to close a disulfize-
cyclized peptide. Failure of this test means that something has changed about the way
in which simple_cycpep_predict handles disulfide-cyclized peptides. This version has a
couple of "tail residues" which precede the lower cysteine and follow the upper. It is a
second test case that the first test was not catching.
Expected output
Five PDB files containing disulfide-cyclized poly-gly peptides. The terminal disulfide
should be between two LCYS residues. There should be one tail residues at the N-terminus
and two at the C-terminus.