Branch: rosetta:commits 「revision: №20594」
Test: m1.clang.python39.PyRosetta.unit
SubTest: T150_core.misc.lkball
SubTest files: 「file-system-view」
Daemon: yoji-1    
State: T150_core.misc.lkball

┌──────────────────────────────────────────────────────────────────────────────┐ │ PyRosetta-4 │ │ Created in JHU by Sergey Lyskov and PyRosetta Team │ │ (C) Copyright Rosetta Commons Member Institutions │ │ │ │ NOTE: USE OF PyRosetta FOR COMMERCIAL PURPOSES REQUIRE PURCHASE OF A LICENSE │ │ See LICENSE.PyRosetta.md or email license@uw.edu for details │ └──────────────────────────────────────────────────────────────────────────────┘ PyRosetta-4 2024 [Rosetta devel 2024.42.post.dev+15.HEAD.ef59a96932c326d6e64c65f6bc6fc7cf9828a0fd 2024-11-07T18:09:09] retrieved from: git@github.com:RosettaCommons/rosetta.git 1 1 2 0 3 0 4 2 5 0 6 0 7 2 8 2 9 0 10 0 11 0 12 0 13 0 14 0 core.init: Checking for fconfig files in pwd and ./rosetta/flags core.init: Rosetta version: 2024.42.post.dev+15.HEAD.ef59a96932 ef59a96932c326d6e64c65f6bc6fc7cf9828a0fd git@github.com:RosettaCommons/rosetta.git 2024-11-07T18:09:09 core.init: Rosetta extras: [] core.init: command: PyRosetta -ex1 -ex2aro -database /Volumes/scratch/w/rosetta/commits/rosetta/source/build/PyRosetta/macOS-12.7-arm64-arm-64bit/clang-14.0.0/python-3.9/minsizerel/build/pyrosetta/database basic.random.init_random_generator: 'RNG device' seed mode, using '/dev/urandom', seed=-366985360 seed_offset=0 real_seed=-366985360 basic.random.init_random_generator: RandomGenerator:init: Normal mode, seed=-366985360 RG_type=mt19937 core.scoring.ScoreFunctionFactory: SCOREFUNCTION: ref2015 core.scoring.etable: Starting energy table calculation core.scoring.etable: smooth_etable: changing atr/rep split to bottom of energy well core.scoring.etable: smooth_etable: spline smoothing lj etables (maxdis = 6) core.scoring.etable: smooth_etable: spline smoothing solvation etables (max_dis = 6) core.scoring.etable: Finished calculating energy tables. basic.io.database: Database file opened: scoring/score_functions/hbonds/ref2015_params/HBPoly1D.csv basic.io.database: Database file opened: scoring/score_functions/hbonds/ref2015_params/HBFadeIntervals.csv basic.io.database: Database file opened: scoring/score_functions/hbonds/ref2015_params/HBEval.csv basic.io.database: Database file opened: scoring/score_functions/hbonds/ref2015_params/DonStrength.csv basic.io.database: Database file opened: scoring/score_functions/hbonds/ref2015_params/AccStrength.csv core.chemical.GlobalResidueTypeSet: Finished initializing fa_standard residue type set. Created 985 residue types core.chemical.GlobalResidueTypeSet: Total time to initialize 0.483617 seconds. basic.io.database: Database file opened: scoring/score_functions/rama/fd/all.ramaProb basic.io.database: Database file opened: scoring/score_functions/rama/fd/prepro.ramaProb basic.io.database: Database file opened: scoring/score_functions/omega/omega_ppdep.all.txt basic.io.database: Database file opened: scoring/score_functions/omega/omega_ppdep.gly.txt basic.io.database: Database file opened: scoring/score_functions/omega/omega_ppdep.pro.txt basic.io.database: Database file opened: scoring/score_functions/omega/omega_ppdep.valile.txt basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA_n core.scoring.P_AA: shapovalov_lib::shap_p_aa_pp_smooth_level of 1( aka low_smooth ) got activated. basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/shapovalov/10deg/kappa131/a20.prop basic.io.database: Database file opened: scoring/score_functions/elec_cp_reps.dat core.scoring.elec.util: Read 40 countpair representative atoms core.pack.dunbrack.RotamerLibrary: shapovalov_lib_fixes_enable option is true. core.pack.dunbrack.RotamerLibrary: shapovalov_lib::shap_dun10_smooth_level of 1( aka lowest_smooth ) got activated. core.pack.dunbrack.RotamerLibrary: Binary rotamer library selected: /Volumes/scratch/w/rosetta/commits/rosetta/source/build/PyRosetta/macOS-12.7-arm64-arm-64bit/clang-14.0.0/python-3.9/minsizerel/build/pyrosetta/database/rotamer/shapovalov/StpDwn_0-0-0/Dunbrack10.lib.bin core.pack.dunbrack.RotamerLibrary: Using Dunbrack library binary file '/Volumes/scratch/w/rosetta/commits/rosetta/source/build/PyRosetta/macOS-12.7-arm64-arm-64bit/clang-14.0.0/python-3.9/minsizerel/build/pyrosetta/database/rotamer/shapovalov/StpDwn_0-0-0/Dunbrack10.lib.bin'. core.pack.dunbrack.RotamerLibrary: Dunbrack 2010 library took 0.072524 seconds to load from binary Finished T150_core.misc.lkball in 0:00:02.543731