「view this page in B3 βῆτα server」

Revisions №62212

branch: rosetta:main 「№62212」
Commited by: Jason C. Klima
GitHub commit link: 「6bb17f80291c8c32」
Difference from previous tested commit:  code diff
Commit date: 2026-01-20 19:12:38
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
PyRosetta.notebook gcc-9.gcc.python37.PyRosetta.unit m1.clang.python310.PyRosetta.unit m1.clang.python311.PyRosetta.unit m1.clang.python312.PyRosetta.unit m1.clang.python313.PyRosetta.unit m1.clang.python314.PyRosetta.unit m1.clang.python38.PyRosetta.unit m1.clang.python39.PyRosetta.unit mac.clang.python38.PyRosetta.unit ubuntu-20.04.clang.cxx11thread.serialization.PyRosetta.unit ubuntu-20.04.clang.cxx11thread.serialization.python310.PyRosetta.unit ubuntu-20.04.clang.cxx11thread.serialization.python311.PyRosetta.unit ubuntu-20.04.clang.cxx11thread.serialization.python312.PyRosetta.unit ubuntu-20.04.clang.cxx11thread.serialization.python313.PyRosetta.unit ubuntu-20.04.clang.cxx11thread.serialization.python314.PyRosetta.unit ubuntu-20.04.clang.cxx11thread.serialization.python39.PyRosetta.unit ubuntu-20.04.clang.python310.PyRosetta.unit ubuntu-20.04.clang.python311.PyRosetta.unit ubuntu-20.04.clang.python312.PyRosetta.unit ubuntu-20.04.clang.python313.PyRosetta.unit ubuntu-20.04.clang.python314.PyRosetta.unit ubuntu-20.04.clang.python39.PyRosetta.unit ubuntu-20.04.gcc.cxx11thread.serialization.PyRosetta.unit ubuntu-20.04.gcc.cxx11thread.serialization.python310.PyRosetta.unit ubuntu-20.04.gcc.cxx11thread.serialization.python311.PyRosetta.unit ubuntu-20.04.gcc.cxx11thread.serialization.python312.PyRosetta.unit ubuntu-20.04.gcc.cxx11thread.serialization.python313.PyRosetta.unit ubuntu-20.04.gcc.cxx11thread.serialization.python314.PyRosetta.unit ubuntu-20.04.gcc.cxx11thread.serialization.python39.PyRosetta.unit ubuntu-20.04.gcc.python310.PyRosetta.unit ubuntu-20.04.gcc.python311.PyRosetta.unit ubuntu-20.04.gcc.python312.PyRosetta.unit ubuntu-20.04.gcc.python313.PyRosetta.unit ubuntu-20.04.gcc.python314.PyRosetta.unit ubuntu-20.04.gcc.python39.PyRosetta.unit ubuntu-22.04.clang.cxx11thread.serialization.PyRosetta.unit ubuntu-22.04.clang.python310.PyRosetta.unit ubuntu-22.04.clang.python311.PyRosetta.unit ubuntu-22.04.clang.python312.PyRosetta.unit ubuntu-22.04.clang.python313.PyRosetta.unit ubuntu-22.04.clang.python314.PyRosetta.unit ubuntu-22.04.clang.python39.PyRosetta.unit ubuntu-22.04.gcc.cxx11thread.serialization.PyRosetta.unit ubuntu-22.04.gcc.python310.PyRosetta.unit ubuntu-22.04.gcc.python311.PyRosetta.unit ubuntu-22.04.gcc.python312.PyRosetta.unit ubuntu-22.04.gcc.python313.PyRosetta.unit ubuntu-22.04.gcc.python314.PyRosetta.unit ubuntu-22.04.gcc.python39.PyRosetta.unit ubuntu-24.04.clang.cxx11thread.serialization.PyRosetta.unit ubuntu-24.04.clang.python310.PyRosetta.unit ubuntu-24.04.clang.python311.PyRosetta.unit ubuntu-24.04.clang.python312.PyRosetta.unit ubuntu-24.04.clang.python313.PyRosetta.unit ubuntu-24.04.clang.python314.PyRosetta.unit ubuntu-24.04.clang.python39.PyRosetta.unit ubuntu-24.04.gcc.python310.PyRosetta.unit ubuntu-24.04.gcc.python311.PyRosetta.unit ubuntu-24.04.gcc.python312.PyRosetta.unit ubuntu-24.04.gcc.python313.PyRosetta.unit ubuntu-24.04.gcc.python314.PyRosetta.unit ubuntu-24.04.gcc.python39.PyRosetta.unit ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit ubuntu.clang.python310.PyRosetta.unit ubuntu.clang.python311.PyRosetta.unit ubuntu.clang.python312.PyRosetta.unit ubuntu.clang.python313.PyRosetta.unit ubuntu.clang.python314.PyRosetta.unit ubuntu.clang.python39.PyRosetta.unit ubuntu.gcc.python310.PyRosetta.unit ubuntu.gcc.python311.PyRosetta.unit ubuntu.gcc.python312.PyRosetta.unit ubuntu.gcc.python313.PyRosetta.unit ubuntu.gcc.python314.PyRosetta.unit ubuntu.gcc.python39.PyRosetta.unit build.clean.debug alpine.gcc.build.debug clang-10.clang.cxx11thread.mpi.serialization.tensorflow.build.debug gcc-10.gcc.build.debug gcc-10.gcc.cxx11thread.serialization.build.debug gcc-11.gcc.build.debug gcc-11.gcc.cxx11thread.serialization.build.debug gcc-9.gcc.build.debug gcc-9.gcc.cxx11thread.serialization.build.debug icc.icc.build.debug linux.clang.bcl.build.debug linux.clang.hdf5.build.debug mysql postgres linux.clang.python310.build.debug linux.clang.python311.build.debug linux.clang.python312.build.debug linux.clang.python39.build.debug linux.zeromq.debug linux.gcc.bcl.build.debug mpi mpi.serialization linux.gcc.python310.build.debug linux.gcc.python311.build.debug linux.gcc.python312.build.debug linux.gcc.python39.build.debug m1.clang.build.debug m1.clang.cxx11thread.serialization.build.debug m1.clang.python310.build.debug m1.clang.python311.build.debug m1.clang.python312.build.debug m1.clang.python313.build.debug m1.clang.python314.build.debug m1.clang.python39.build.debug ubuntu-20.04.clang.build.debug ubuntu-20.04.clang.cxx11thread.serialization.build.debug ubuntu-20.04.gcc.build.debug ubuntu-20.04.gcc.cxx11thread.serialization.build.debug ubuntu-22.04.clang.build.debug ubuntu-22.04.clang.cxx11thread.serialization.build.debug ubuntu-22.04.gcc.build.debug ubuntu-22.04.gcc.cxx11thread.serialization.build.debug ubuntu-24.04.clang.build.debug ubuntu-24.04.clang.cxx11thread.serialization.build.debug ubuntu-24.04.gcc.build.debug ubuntu-24.04.gcc.cxx11thread.serialization.build.debug ubuntu.clang.bcl.build.debug ubuntu.clang.build.debug ubuntu.clang.cxx11thread.serialization.build.debug ubuntu.clang.python310.build.debug ubuntu.clang.python311.build.debug ubuntu.clang.python312.build.debug ubuntu.clang.python313.build.debug ubuntu.clang.python314.build.debug ubuntu.clang.python39.build.debug ubuntu.gcc.bcl.build.debug ubuntu.gcc.build.debug ubuntu.gcc.cxx11thread.serialization.build.debug ubuntu.gcc.python310.build.debug ubuntu.gcc.python311.build.debug ubuntu.gcc.python312.build.debug ubuntu.gcc.python313.build.debug ubuntu.gcc.python314.build.debug ubuntu.gcc.python39.build.debug build.header build.levels build.ninja_debug gcc-10.gcc.build.release gcc-10.gcc.cxx11thread.serialization.build.release gcc-11.gcc.build.release gcc-11.gcc.cxx11thread.serialization.build.release gcc-9.gcc.build.release gcc-9.gcc.cxx11thread.serialization.build.release linux.clang.python310.build.release linux.clang.python311.build.release linux.clang.python312.build.release linux.clang.python39.build.release linux.gcc.python310.build.release linux.gcc.python311.build.release linux.gcc.python312.build.release linux.gcc.python39.build.release static m1.clang.build.release m1.clang.cxx11thread.serialization.build.release m1.clang.python310.build.release m1.clang.python311.build.release m1.clang.python312.build.release m1.clang.python313.build.release m1.clang.python314.build.release m1.clang.python39.build.release torch.gcc.torch.python39.build.release ubuntu-20.04.clang.build.release ubuntu-20.04.clang.cxx11thread.serialization.build.release ubuntu-20.04.gcc.build.release ubuntu-20.04.gcc.cxx11thread.serialization.build.release ubuntu-22.04.clang.build.release ubuntu-22.04.clang.cxx11thread.serialization.build.release ubuntu-22.04.gcc.build.release ubuntu-22.04.gcc.cxx11thread.serialization.build.release ubuntu-24.04.clang.build.release ubuntu-24.04.clang.cxx11thread.serialization.build.release ubuntu-24.04.gcc.build.release ubuntu-24.04.gcc.cxx11thread.serialization.build.release ubuntu.clang.build.release ubuntu.clang.cxx11thread.serialization.build.release ubuntu.clang.python310.build.release ubuntu.clang.python311.build.release ubuntu.clang.python312.build.release ubuntu.clang.python313.build.release ubuntu.clang.python314.build.release ubuntu.clang.python39.build.release ubuntu.gcc.build.release ubuntu.gcc.cxx11thread.serialization.build.release ubuntu.gcc.python310.build.release ubuntu.gcc.python311.build.release ubuntu.gcc.python312.build.release ubuntu.gcc.python313.build.release ubuntu.gcc.python314.build.release ubuntu.gcc.python39.build.release beautification code_quality.clang_analysis code_quality.clang_tidy code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.addsan integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration.tutorials integration.ubsan integration maintenance.documentation performance profile m1.clang.python310.release.PyRosetta.MinSizeRel m1.clang.python311.release.PyRosetta.MinSizeRel m1.clang.python312.release.PyRosetta.MinSizeRel m1.clang.python313.release.PyRosetta.MinSizeRel m1.clang.python38.release.PyRosetta.MinSizeRel m1.clang.python39.release.PyRosetta.MinSizeRel mac.clang.python310.release.PyRosetta.MinSizeRel mac.clang.python311.release.PyRosetta.MinSizeRel mac.clang.python312.release.PyRosetta.MinSizeRel mac.clang.python313.release.PyRosetta.MinSizeRel mac.clang.python38.release.PyRosetta.MinSizeRel mac.clang.python39.release.PyRosetta.MinSizeRel ubuntu.clang.python310.release.PyRosetta.MinSizeRel ubuntu.clang.python311.release.PyRosetta.MinSizeRel ubuntu.clang.python312.release.PyRosetta.MinSizeRel ubuntu.clang.python313.release.PyRosetta.MinSizeRel ubuntu.clang.python38.release.PyRosetta.MinSizeRel ubuntu.clang.python39.release.PyRosetta.MinSizeRel m1.clang.python310.release.PyRosetta.Release m1.clang.python311.release.PyRosetta.Release m1.clang.python312.release.PyRosetta.Release m1.clang.python313.release.PyRosetta.Release m1.clang.python38.release.PyRosetta.Release m1.clang.python39.release.PyRosetta.Release mac.clang.python310.release.PyRosetta.Release mac.clang.python311.release.PyRosetta.Release mac.clang.python312.release.PyRosetta.Release mac.clang.python313.release.PyRosetta.Release mac.clang.python38.release.PyRosetta.Release mac.clang.python39.release.PyRosetta.Release ubuntu.clang.python310.release.PyRosetta.Release ubuntu.clang.python311.release.PyRosetta.Release ubuntu.clang.python312.release.PyRosetta.Release ubuntu.clang.python313.release.PyRosetta.Release ubuntu.clang.python38.release.PyRosetta.Release ubuntu.clang.python39.release.PyRosetta.Release release.PyRosetta.conda.Release release.source scientific.FlexPepDock.debug scientific.FlexPepDock scientific.RosettaCM.debug scientific.RosettaCM scientific.abinitio_RosettaNMR_pcs.debug scientific.abinitio_RosettaNMR_rdc.debug scientific.antibody_grafting.debug scientific.antibody_grafting scientific.ddg_ala_scan.debug scientific.ddg_ala_scan scientific.docking.debug scientific.docking_ensemble.debug scientific.fragments_picking.debug scientific.ligand_docking.debug scientific.loop_modeling_kic_12res.debug scientific.make_fragments scientific.mp_dock.debug scientific.mp_f19_decoy_discrimination scientific.mp_f19_sequence_recovery.debug scientific.mp_relax scientific.mp_symdock scientific.peptide_pnear_vs_ic50.debug scientific.rna_denovo_favorites linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify unit.addsan linux.clang.unit.release linux.gcc.unit.release unit.ubsan gcc-10.gcc.cxx11thread.serialization.unit gcc-10.gcc.unit gcc-11.gcc.cxx11thread.serialization.unit gcc-11.gcc.unit gcc-9.gcc.cxx11thread.serialization.unit gcc-9.gcc.unit linux.clang.python310.unit linux.clang.python311.unit linux.clang.python312.unit linux.clang.python39.unit linux.gcc.python310.unit linux.gcc.python311.unit linux.gcc.python312.unit linux.gcc.python39.unit m1.clang.cxx11thread.serialization.unit m1.clang.python310.unit m1.clang.python311.unit m1.clang.python312.unit m1.clang.python313.unit m1.clang.python314.unit m1.clang.python39.unit m1.clang.unit ubuntu-20.04.clang.cxx11thread.serialization.unit ubuntu-20.04.clang.python39.unit ubuntu-20.04.clang.unit ubuntu-20.04.gcc.cxx11thread.serialization.unit ubuntu-20.04.gcc.python39.unit ubuntu-20.04.gcc.unit ubuntu-22.04.clang.cxx11thread.serialization.unit ubuntu-22.04.clang.python39.unit ubuntu-22.04.clang.unit ubuntu-22.04.gcc.cxx11thread.serialization.unit ubuntu-22.04.gcc.python39.unit ubuntu-22.04.gcc.unit ubuntu-24.04.clang.cxx11thread.serialization.unit ubuntu-24.04.clang.unit ubuntu-24.04.gcc.cxx11thread.serialization.unit ubuntu-24.04.gcc.unit ubuntu.clang.cxx11thread.serialization.unit ubuntu.clang.python310.unit ubuntu.clang.python311.unit ubuntu.clang.python312.unit ubuntu.clang.python313.unit ubuntu.clang.python314.unit ubuntu.clang.python39.unit ubuntu.clang.unit ubuntu.gcc.cxx11thread.serialization.unit ubuntu.gcc.python310.unit ubuntu.gcc.python311.unit ubuntu.gcc.python312.unit ubuntu.gcc.python313.unit ubuntu.gcc.python314.unit ubuntu.gcc.python39.unit ubuntu.gcc.unit util.apps windows.build.debug windows.build.release

Supporting task retries in PyRosettaCluster (#605) `PyRosettaCluster` supports running tasks on available compute resources; however, often it's more economical to run tasks on preemptible compute resources, such as cloud spot instances or backfill queues. This PR exposes Dask's task retry API via the `PyRosettaCluster.distribute` method, allowing configuration of the number of automatic retries for each submitted task. When the `retries` keyword argument parameter is set, `PyRosettaCluster` will reschedule failed tasks up to the specified number of times if compute resources are reclaimed midway through a protocol. This PR also adds a logging warning if using the `resources` keyword argument with `dask` version `<2.1.0`.

...
Test: mac.clang.python39.integration

Failed sub-tests (click for more details):
features
Test: linux.clang.maintenance.documentation

 View log

Loading...

 View log in dialog  View log in log in separate window
Test: ubuntu.clang.python310.release.PyRosetta.MinSizeRel

 View log

Loading...

 View log in dialog  View log in log in separate window
Test: ubuntu-20.04.clang.python36.scientific.FlexPepDock

 View log

Loading...

 View log in dialog  View log in log in separate window
Test: ubuntu-20.04.gcc.cxx11thread.mpi.serialization.python36.scientific.peptide_pnear_vs_ic50.debug

 View log

Loading...

 View log in dialog  View log in log in separate window