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Revisions №62118

branch: rosetta:main 「№62118」
Commited by: Sergey Lyskov
GitHub commit link: 「5a87a3b5d8e5a003」
Difference from previous tested commit:  code diff
Commit date: 2024-06-20 17:12:14
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
PyRosetta.notebook gcc-9.gcc.python37.PyRosetta.unit linux.clang.cxx11thread.serialization.PyRosetta.unit linux.clang.cxx11thread.serialization.python37.PyRosetta.unit linux.clang.python310.PyRosetta.unit linux.clang.python311.PyRosetta.unit linux.clang.python312.PyRosetta.unit linux.clang.python38.PyRosetta.unit linux.clang.python39.PyRosetta.unit linux.gcc.cxx11thread.serialization.PyRosetta.unit linux.gcc.python310.PyRosetta.unit linux.gcc.python311.PyRosetta.unit linux.gcc.python312.PyRosetta.unit linux.gcc.python38.PyRosetta.unit linux.gcc.python39.PyRosetta.unit m1.clang.cxx11thread.serialization.PyRosetta.unit m1.clang.python310.PyRosetta.unit m1.clang.python311.PyRosetta.unit m1.clang.python312.PyRosetta.unit m1.clang.python38.PyRosetta.unit m1.clang.python39.PyRosetta.unit mac.clang.cxx11thread.serialization.PyRosetta.unit mac.clang.python310.PyRosetta.unit mac.clang.python311.PyRosetta.unit mac.clang.python312.PyRosetta.unit mac.clang.python38.PyRosetta.unit mac.clang.python39.PyRosetta.unit ubuntu-20.04.clang.cxx11thread.serialization.PyRosetta.unit ubuntu-20.04.clang.python310.PyRosetta.unit ubuntu-20.04.clang.python311.PyRosetta.unit ubuntu-20.04.clang.python312.PyRosetta.unit ubuntu-20.04.clang.python38.PyRosetta.unit ubuntu-20.04.clang.python39.PyRosetta.unit ubuntu-20.04.gcc.cxx11thread.serialization.PyRosetta.unit ubuntu-20.04.gcc.python310.PyRosetta.unit ubuntu-20.04.gcc.python311.PyRosetta.unit ubuntu-20.04.gcc.python312.PyRosetta.unit ubuntu-20.04.gcc.python38.PyRosetta.unit ubuntu-20.04.gcc.python39.PyRosetta.unit ubuntu-22.04.clang.cxx11thread.serialization.PyRosetta.unit ubuntu-22.04.clang.python310.PyRosetta.unit ubuntu-22.04.clang.python311.PyRosetta.unit ubuntu-22.04.clang.python312.PyRosetta.unit ubuntu-22.04.clang.python38.PyRosetta.unit ubuntu-22.04.clang.python39.PyRosetta.unit ubuntu-22.04.gcc.cxx11thread.serialization.PyRosetta.unit ubuntu-22.04.gcc.python310.PyRosetta.unit ubuntu-22.04.gcc.python311.PyRosetta.unit 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integration.addsan integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration.tutorials integration.ubsan integration.valgrind integration maintenance.documentation performance profile linux.clang.python310.release.PyRosetta.Debug linux.clang.python311.release.PyRosetta.Debug linux.clang.python37.release.PyRosetta.Debug linux.clang.python38.release.PyRosetta.Debug linux.clang.python39.release.PyRosetta.Debug linux.clang.python310.release.PyRosetta.MinSizeRel linux.clang.python311.release.PyRosetta.MinSizeRel linux.clang.python37.release.PyRosetta.MinSizeRel linux.clang.python38.release.PyRosetta.MinSizeRel linux.clang.python39.release.PyRosetta.MinSizeRel m1.clang.python310.release.PyRosetta.MinSizeRel m1.clang.python311.release.PyRosetta.MinSizeRel m1.clang.python38.release.PyRosetta.MinSizeRel m1.clang.python39.release.PyRosetta.MinSizeRel mac.clang.python310.release.PyRosetta.MinSizeRel mac.clang.python311.release.PyRosetta.MinSizeRel mac.clang.python38.release.PyRosetta.MinSizeRel mac.clang.python39.release.PyRosetta.MinSizeRel ubuntu.clang.python310.release.PyRosetta.MinSizeRel ubuntu.clang.python311.release.PyRosetta.MinSizeRel ubuntu.clang.python37.release.PyRosetta.MinSizeRel ubuntu.clang.python38.release.PyRosetta.MinSizeRel ubuntu.clang.python39.release.PyRosetta.MinSizeRel linux.clang.python310.release.PyRosetta.Release linux.clang.python311.release.PyRosetta.Release linux.clang.python37.release.PyRosetta.Release linux.clang.python38.release.PyRosetta.Release linux.clang.python39.release.PyRosetta.Release m1.clang.python310.release.PyRosetta.Release m1.clang.python311.release.PyRosetta.Release m1.clang.python38.release.PyRosetta.Release m1.clang.python39.release.PyRosetta.Release mac.clang.python310.release.PyRosetta.Release mac.clang.python311.release.PyRosetta.Release mac.clang.python38.release.PyRosetta.Release mac.clang.python39.release.PyRosetta.Release 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scientific.glycan_dock scientific.glycan_structure_prediction.debug scientific.glycan_structure_prediction scientific.ligand_docking.debug scientific.ligand_docking scientific.ligand_scoring_ranking.debug scientific.ligand_scoring_ranking scientific.loop_modeling_ccd_12res scientific.loop_modeling_kic_12res.debug scientific.loop_modeling_kic_12res scientific.loop_modeling_kic_fragments_12res.debug scientific.loop_modeling_kic_fragments_12res scientific.loop_modeling_ngk_12res.debug scientific.loop_modeling_ngk_12res scientific.make_fragments.debug scientific.make_fragments scientific.mhc_epitope_energy.debug scientific.mhc_epitope_energy scientific.mp_domain_assembly.debug scientific.mp_domain_assembly scientific.mp_f19_decoy_discrimination.debug scientific.mp_f19_decoy_discrimination scientific.mp_f19_sequence_recovery.debug scientific.mp_f19_sequence_recovery scientific.mp_f19_tilt_angle.debug scientific.mp_f19_tilt_angle scientific.mp_lipid_acc.debug scientific.mp_lipid_acc scientific.mp_relax scientific.peptide_pnear_vs_ic50.debug scientific.peptide_pnear_vs_ic50 scientific.sewing.debug scientific.sewing scientific.simple_cycpep_predict.debug linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify unit.addsan linux.clang.unit.release linux.gcc.unit.release mac.clang.unit.release unit.ubsan unit.valgrind gcc-10.gcc.cxx11thread.serialization.unit gcc-10.gcc.unit gcc-11.gcc.cxx11thread.serialization.unit gcc-11.gcc.unit gcc-9.gcc.cxx11thread.serialization.unit gcc-9.gcc.unit linux.clang.cxx11thread.serialization.unit linux.clang.python310.unit linux.clang.python311.unit linux.clang.python312.unit linux.clang.python38.unit linux.clang.python39.unit linux.gcc.python310.unit linux.gcc.python311.unit linux.gcc.python312.unit linux.gcc.python38.unit linux.gcc.python39.unit m1.clang.cxx11thread.serialization.unit m1.clang.python310.unit m1.clang.python311.unit 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ubuntu.clang.unit ubuntu.gcc.cxx11thread.serialization.unit ubuntu.gcc.python310.unit ubuntu.gcc.python311.unit ubuntu.gcc.python312.unit ubuntu.gcc.python38.unit ubuntu.gcc.python39.unit ubuntu.gcc.unit util.apps windows.build.debug windows.build.release

fix PyRosetta build (#71)

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Test: ubuntu.gcc.integration.addsan

Failed sub-tests (click for more details):
code_template_tests_src
Test: linux.clang.integration.release_debug_no_symbols

Failed sub-tests (click for more details):
code_template_tests_src
Test: ubuntu.gcc.integration.ubsan

Failed sub-tests (click for more details):
code_template_tests_src
Test: mac.clang.python39.integration

Failed sub-tests (click for more details):
code_template_tests_src
Test: linux.clang.maintenance.documentation

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Test: linux.clang.python310.release.PyRosetta.Debug

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Test: ubuntu-20.04.clang.python36.scientific.FlexPepDock

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Test: ubuntu-20.04.clang.python36.scientific.antibody_snugdock

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Test: ubuntu-20.04.gcc.mpi.serialization.python36.scientific.glycan_structure_prediction

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Test: ubuntu-20.04.clang.python36.scientific.mp_f19_decoy_discrimination.debug

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Test: ubuntu-20.04.clang.python36.scientific.mp_f19_decoy_discrimination

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Test: ubuntu-20.04.clang.python36.scientific.mp_f19_tilt_angle.debug

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Test: ubuntu-20.04.clang.python36.scientific.mp_f19_tilt_angle

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Test: ubuntu-20.04.clang.python36.scientific.mp_lipid_acc

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Test: ubuntu-20.04.gcc.cxx11thread.mpi.serialization.python36.scientific.peptide_pnear_vs_ic50.debug

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Test: ubuntu-20.04.gcc.cxx11thread.mpi.serialization.python36.scientific.peptide_pnear_vs_ic50

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Test: ubuntu-20.04.gcc.cxx11thread.mpi.serialization.python36.scientific.simple_cycpep_predict.debug

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Test: linux.gcc.unit.valgrind

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Test: ubuntu.gcc.python39.unit

Failed sub-tests (click for more details):
core:CyclicGeometry_nmethyl_beta_TwoChainTests_A:test_cyclic_permutation_current_default_scorefxn core:CyclicGeometry_nmethyl_beta_TwoChainTests_A:test_cyclic_permutation_dslf_fa13 core:CyclicGeometry_nmethyl_beta_TwoChainTests_A:test_cyclic_permutation_fa_dun_dev core:CyclicGeometry_nmethyl_beta_TwoChainTests_A:test_cyclic_permutation_fa_dun_semi core:CyclicGeometry_nmethyl_beta_TwoChainTests_A:test_cyclic_permutation_fa_intra_atr_xover4 core:CyclicGeometry_nmethyl_beta_TwoChainTests_A:test_cyclic_permutation_fa_intra_rep core:CyclicGeometry_nmethyl_beta_TwoChainTests_A:test_cyclic_permutation_fa_intra_rep_xover4 core:CyclicGeometry_nmethyl_beta_TwoChainTests_A:test_cyclic_permutation_fa_rep core:CyclicGeometry_nmethyl_beta_TwoChainTests_A:test_cyclic_permutation_lk_ball_bridge core:CyclicGeometry_nmethyl_beta_TwoChainTests_A:test_cyclic_permutation_lk_ball_bridge_uncpl core:CyclicGeometry_nmethyl_beta_TwoChainTests_A:test_cyclic_permutation_p_aa_pp core:CyclicGeometry_nmethyl_beta_TwoChainTests_A:test_cyclic_permutation_pro_close core:CyclicGeometry_nmethyl_beta_TwoChainTests_A:test_cyclic_permutation_rama_prepro core:CyclicGeometry_nmethyl_beta_TwoChainTests_B:test_cyclic_permutation_beta core:CyclicGeometry_nmethyl_beta_TwoChainTests_B:test_cyclic_permutation_cart_bonded core:CyclicGeometry_nmethyl_beta_TwoChainTests_B:test_cyclic_permutation_fa_atr core:CyclicGeometry_nmethyl_beta_TwoChainTests_B:test_cyclic_permutation_fa_dun_rot core:CyclicGeometry_nmethyl_beta_TwoChainTests_B:test_cyclic_permutation_fa_elec core:CyclicGeometry_nmethyl_beta_TwoChainTests_B:test_cyclic_permutation_fa_intra_elec core:CyclicGeometry_nmethyl_beta_TwoChainTests_B:test_cyclic_permutation_fa_intra_sol_xover4 core:CyclicGeometry_nmethyl_beta_TwoChainTests_B:test_cyclic_permutation_fa_sol core:CyclicGeometry_nmethyl_beta_TwoChainTests_B:test_cyclic_permutation_hbonds core:CyclicGeometry_nmethyl_beta_TwoChainTests_B:test_cyclic_permutation_hxl_tors core:CyclicGeometry_nmethyl_beta_TwoChainTests_B:test_cyclic_permutation_lk_ball core:CyclicGeometry_nmethyl_beta_TwoChainTests_B:test_cyclic_permutation_lk_ball_iso core:CyclicGeometry_nmethyl_beta_TwoChainTests_B:test_cyclic_permutation_omega core:CyclicGeometry_nmethyl_beta_TwoChainTests_B:test_cyclic_permutation_rama core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_beta_nov16 core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_cart_bonded core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_current_default_scorefxn core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_dslf_fa13 core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_atr core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_dun_dev core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_dun_rot core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_dun_semi core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_elec core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_intra_atr_xover4 core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_intra_elec core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_intra_rep core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_intra_rep_xover4 core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_intra_sol_xover4 core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_rep core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_sol core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_hbonds core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_hxl_tors core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_lk_ball core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_lk_ball_bridge core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_lk_ball_bridge_uncpl core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_lk_ball_iso core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_omega core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_p_aa_pp core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_pro_close core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_rama core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_rama_prepro