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Revisions №62111

branch: rosetta:main 「№62111」
Commited by: Rocco Moretti
GitHub commit link: 「a4e12f6f30c1bf53」
Difference from previous tested commit:  code diff
Commit date: 2024-05-24 12:25:35
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
PyRosetta.notebook gcc-9.gcc.python37.PyRosetta.unit linux.clang.cxx11thread.serialization.python37.PyRosetta.unit linux.clang.python310.PyRosetta.unit linux.gcc.python312.PyRosetta.unit m1.clang.python310.PyRosetta.unit m1.clang.python38.PyRosetta.unit m1.clang.python39.PyRosetta.unit mac.clang.python310.PyRosetta.unit mac.clang.python38.PyRosetta.unit mac.clang.python39.PyRosetta.unit ubuntu-20.04.clang.python39.PyRosetta.unit ubuntu-22.04.clang.python39.PyRosetta.unit build.clean.debug alpine.gcc.build.debug clang-10.clang.cxx11thread.mpi.serialization.tensorflow.build.debug gcc-10.gcc.build.debug gcc-11.gcc.build.debug gcc-9.gcc.build.debug icc.icc.build.debug linux.clang.bcl.build.debug linux.clang.hdf5.build.debug mysql postgres linux.clang.python310.build.debug linux.clang.python311.build.debug linux.clang.python312.build.debug linux.clang.python38.build.debug linux.clang.python39.build.debug linux.zeromq.debug linux.gcc.bcl.build.debug mpi mpi.serialization linux.gcc.python310.build.debug linux.gcc.python311.build.debug linux.gcc.python312.build.debug linux.gcc.python38.build.debug linux.gcc.python39.build.debug m1.clang.python310.build.debug m1.clang.python311.build.debug m1.clang.python312.build.debug m1.clang.python38.build.debug m1.clang.python39.build.debug mac.clang.bcl.build.debug OpenCL mac.clang.python310.build.debug mac.clang.python311.build.debug mac.clang.python312.build.debug mac.clang.python38.build.debug mac.clang.python39.build.debug ubuntu.clang.bcl.build.debug ubuntu.clang.python310.build.debug ubuntu.clang.python311.build.debug ubuntu.clang.python312.build.debug ubuntu.clang.python38.build.debug ubuntu.clang.python39.build.debug ubuntu.gcc.bcl.build.debug ubuntu.gcc.python310.build.debug ubuntu.gcc.python311.build.debug ubuntu.gcc.python312.build.debug ubuntu.gcc.python38.build.debug ubuntu.gcc.python39.build.debug build.header build.levels build.ninja_debug graphics gcc-10.gcc.build.release gcc-11.gcc.build.release gcc-9.gcc.build.release linux.clang.python310.build.release linux.clang.python311.build.release linux.clang.python312.build.release linux.clang.python38.build.release linux.clang.python39.build.release linux.gcc.python310.build.release linux.gcc.python311.build.release linux.gcc.python312.build.release linux.gcc.python38.build.release linux.gcc.python39.build.release static m1.clang.python310.build.release m1.clang.python311.build.release m1.clang.python312.build.release m1.clang.python38.build.release m1.clang.python39.build.release mac.clang.python310.build.release mac.clang.python311.build.release mac.clang.python312.build.release mac.clang.python38.build.release mac.clang.python39.build.release mac.clang.static.build.release torch.gcc.torch.python39.build.release ubuntu.clang.python310.build.release ubuntu.clang.python311.build.release ubuntu.clang.python312.build.release ubuntu.clang.python38.build.release ubuntu.clang.python39.build.release ubuntu.gcc.python310.build.release ubuntu.gcc.python311.build.release ubuntu.gcc.python312.build.release ubuntu.gcc.python38.build.release ubuntu.gcc.python39.build.release beautification code_quality.clang_analysis code_quality.clang_tidy code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.addsan integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration.tutorials integration.ubsan integration.valgrind integration performance profile linux.clang.python310.release.PyRosetta.Debug linux.clang.python311.release.PyRosetta.Debug linux.clang.python37.release.PyRosetta.Debug linux.clang.python38.release.PyRosetta.Debug linux.clang.python39.release.PyRosetta.Debug linux.clang.python310.release.PyRosetta.MinSizeRel linux.clang.python311.release.PyRosetta.MinSizeRel linux.clang.python37.release.PyRosetta.MinSizeRel linux.clang.python38.release.PyRosetta.MinSizeRel linux.clang.python39.release.PyRosetta.MinSizeRel m1.clang.python310.release.PyRosetta.MinSizeRel m1.clang.python311.release.PyRosetta.MinSizeRel m1.clang.python38.release.PyRosetta.MinSizeRel m1.clang.python39.release.PyRosetta.MinSizeRel mac.clang.python310.release.PyRosetta.MinSizeRel mac.clang.python311.release.PyRosetta.MinSizeRel mac.clang.python38.release.PyRosetta.MinSizeRel mac.clang.python39.release.PyRosetta.MinSizeRel ubuntu.clang.python310.release.PyRosetta.MinSizeRel ubuntu.clang.python311.release.PyRosetta.MinSizeRel ubuntu.clang.python37.release.PyRosetta.MinSizeRel ubuntu.clang.python38.release.PyRosetta.MinSizeRel ubuntu.clang.python39.release.PyRosetta.MinSizeRel linux.clang.python310.release.PyRosetta.Release linux.clang.python311.release.PyRosetta.Release linux.clang.python37.release.PyRosetta.Release linux.clang.python38.release.PyRosetta.Release linux.clang.python39.release.PyRosetta.Release m1.clang.python310.release.PyRosetta.Release m1.clang.python311.release.PyRosetta.Release m1.clang.python38.release.PyRosetta.Release m1.clang.python39.release.PyRosetta.Release mac.clang.python310.release.PyRosetta.Release mac.clang.python311.release.PyRosetta.Release mac.clang.python38.release.PyRosetta.Release mac.clang.python39.release.PyRosetta.Release ubuntu.clang.python310.release.PyRosetta.Release ubuntu.clang.python311.release.PyRosetta.Release ubuntu.clang.python37.release.PyRosetta.Release ubuntu.clang.python38.release.PyRosetta.Release ubuntu.clang.python39.release.PyRosetta.Release release.PyRosetta.conda.Release release.source scientific.FlexPepDock scientific.antibody_grafting.debug scientific.ddg_ala_scan scientific.enzyme_design.debug scientific.enzyme_design scientific.make_fragments scientific.protein_data_bank_diagnostic.cif scientific.relax_cartesian.debug scientific.relax_cartesian scientific.relax_fast.debug scientific.sb_talaris13_docking scientific.sb_talaris14_fast_design scientific.simple_cycpep_predict linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify unit.addsan linux.clang.unit.release linux.gcc.unit.release mac.clang.unit.release unit.ubsan unit.valgrind gcc-10.gcc.unit gcc-11.gcc.unit gcc-9.gcc.unit linux.clang.python310.unit linux.clang.python311.unit linux.clang.python312.unit linux.clang.python38.unit linux.clang.python39.unit linux.gcc.python310.unit linux.gcc.python311.unit linux.gcc.python312.unit linux.gcc.python38.unit linux.gcc.python39.unit m1.clang.python310.unit m1.clang.python311.unit m1.clang.python312.unit m1.clang.python38.unit m1.clang.python39.unit mac.clang.python310.unit mac.clang.python311.unit mac.clang.python312.unit mac.clang.python38.unit mac.clang.python39.unit ubuntu-20.04.clang.python39.unit ubuntu-20.04.gcc.python39.unit ubuntu-22.04.clang.python39.unit ubuntu-22.04.gcc.python39.unit ubuntu.clang.python310.unit ubuntu.clang.python311.unit ubuntu.clang.python312.unit ubuntu.clang.python38.unit ubuntu.clang.python39.unit ubuntu.gcc.python310.unit ubuntu.gcc.python311.unit ubuntu.gcc.python312.unit ubuntu.gcc.python38.unit ubuntu.gcc.python39.unit util.apps windows.build.debug windows.build.release

Clean up integration tests for running on Python 3.12 (#55) If we're updating compilation to only use Python3 (#54), updating the integration tests to remove Python2 dependence also makes sense. It looks like we've mostly fixed any usage of Python2 already, but I can clean up the ability to use python2 in the framework. There's also some additional fixes to be compatible with Python 3.12 in particular, as well as some additional diagonstics that can be printed which might be helpful for running on a fresh copy of Python (e.g. a simple Conda environment). I also cleaned up the test commands such that they all use the same python which is used to launch the integration.py script. (Now that we don't need to have multiple pythons.)

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Test: linux.gcc.mpi.serialization.integration.mpi

Failed sub-tests (click for more details):
replica_docking
Test: ubuntu-20.04.clang.python36.scientific.FlexPepDock

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Test: ubuntu-20.04.clang.python36.scientific.ddg_ala_scan

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Test: ubuntu-20.04.gcc.cxx11thread.mpi.serialization.python36.scientific.simple_cycpep_predict

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Test: linux.gcc.unit.valgrind

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Test: windows.cl.windows.build.debug

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Test: windows.cl.windows.build.release

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