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Revisions №21232

branch: rosetta:commits 「№21232」
Commited by: Rocco Moretti
GitHub Pull Request link: 「№698」
Merge: 「d10f3af57」← 「ce5f3d407」  code diff
Scheduled at: 2026-05-11 18:26:58.009220
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
mac.clang.python38.PyRosetta.unit ubuntu.clang.cxx11thread.serialization.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration.torch integration performance profile linux.clang.score linux.gcc.score mac.clang.score scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №698 RosettaCommons/rosetta/main ← roccomoretti/rosetta/change_chirality_loading Merge: d10f3af574b60550f256856d5a9742600ce1128b←ce5f3d4075a358bb271643185fb7c25d03bb26bd Rework chirality detection in restype determination for PDB loading ---------------- Merge commit message: Beauty

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Test: linux.gcc.mpi.serialization.integration.mpi

Failed sub-tests (click for more details):
replica_docking
Test: linux.clang.integration.release_debug_no_symbols

Failed sub-tests (click for more details):
AlignPDBInfoToSequences AnchorFinder AnchoredPDBCreator BFactorSelector DNA_methylation FavorSequenceProfileMover HDXEnergy InterfaceAnalyzer InterfaceAnalyzer_metrics PDB_diagnostic ProQ RBOut RunSimpleMetric_b_factor_test SnugDock ThreadingInputter UBQ_E2_thioester UBQ_Gp_CYD-CYD UBQ_Gp_LYX-Cterm add_job_pair_data ambiguous_nmr_distance_constraint antibody_designer_camelid antibody_graft antibody_numbering_converter auto-drrafter_setup_run_R1 auto-drrafter_setup_run_R2 auto-drrafter_setup_run_R3 autosetup_metals_centroid backrub backrub_pilot batch_relax burial_measure_centroid buried_unsat_kinemage c-term_conjugation cart_min_glycans ccd_ends_graft_mover_rs centroid_from_fullatom cl_complex_rescore classic_relax_1a19 cluster_alns combine_silent coupled_moves create_clash-based_repack_shell cs_rosetta_rna cst_info cyclization cycpep_rigid_body_permutation_mover ddG_of_mutation density_refine design_glycans design_w_custom_palette-RNA dgdp_aio dgdp_script distances docking_ensemble docking_ensemble_prepack drrafter_error_estimation drrafter_run enzscore_filter_dimetal enzscore_filter_dimetal_sym enzscore_filter_ligand enzscore_filter_metal enzscore_filter_metal_sym erraser_minimize exclusively_shared_jumps farfar_mrna farnesyl fast_relax favor_coupling_tensor fix_alignment_to_match_pdb flexpepdock fold_and_dock ga_ligand_dock_macrocycle genkic_sugars glycan_anomers glycan_clash_check glycan_refinment glycan_relax glycan_tree_relax glycopeptidedocking glycopeptidedocking_diglyco_long hbs_design hotspot_stub_constraints hybridization identify_cdr_clusters ig_dump interface_energy iphold jd2test_PDBIO jd2test_PDBin_mmCIFout jd2test_PDBin_mmCIFout_extra_data_separate jd2test_mmCIFIO jd2test_mmCIFin_PDBout job_definition_script_vars jscore ligand_motif_design ligand_motif_identification ligand_water_docking loop_hash make_exemplar make_symmdef_file match_1c2t match_1n9l match_6cpa match_xml metal_setup metropolis_hastings mmtfIO_score_test mp_dock mp_dock_ensemble mp_dock_prepack mp_interface_statistics mp_loadtime mp_mutate_relax mp_mutate_repack mp_range_relax mp_relax mp_score_jd2 mp_span_from_pdb mp_symdock mp_symmetry_load mp_transform mp_transform_optimize mp_vis_emb mpi_multistate_design mpil_find_pore_ahelical mpil_find_pore_bbarrel mpil_load_implicit_lipids mr_protocols multistage_rosetta_scripts mutate nucleobase_sample_around orbitals pH_mode per_residue_sc_sasa per_residue_solvent_exposure pertmin phosphonate pna_base_pairs pocket_measure pocket_relax pocket_suggest_targets protocol_metric range_relax_w_cst rb_recces readin_dna_rna_protein real_virt_mover recces_turner relax_w_allatom_cst rna_assemble rna_denovo rna_denovo_RNP_low_res rna_denovo_RNP_refine_native rna_denovo_bps rna_denovo_bps_fixed_ends rna_denovo_bps_helix_ends rna_denovo_dna_bridge rna_denovo_fragment_homology_exclusion rna_denovo_grid_vdw rna_denovo_new_FT_2in_dens rna_denovo_new_FT_5P_j12_leadzyme rna_denovo_new_FT_RNP_2prot_dens rna_denovo_new_FT_rna_two_chains rna_denovo_new_libs rna_design rna_farfar_noncanonical_hairpin rna_helix rna_minimize rna_motif rna_predict_chem_map rna_puzzle11_H2H3H4_run3_connectU40 rna_puzzle12_P5P6P7_DMS rna_puzzle5_P15P3P8_noP4P6_4RB_G208phosphate_ligation rna_puzzle6_U75G76A77_on_thread1 rna_puzzle6_j67_into_p6p7rigidbody_thread1 rna_ribosome_tether rna_score rna_screen_phosphates rnp_ddg_calc_mut rnp_ddg_calc_wt rnp_ddg_relax_command_1 rnp_ddg_relax_command_2 rosetta_scripts_jd3 rosie_ligand_docking rs_flexbbmoves sample_seq_from_probs sasa_metric_options secondary_structure_output seed_ensemble_JD2_JI sequence_tolerance sim_cryo simple_dna_test simple_glycosylation_alternate_AAs simple_metric_cache simple_metric_features simple_metric_filter simple_metrics simple_metrics_b_factor simple_metrics_in_protocols simple_metrics_per_residue site_constraint stepwise_lores struc_set_fragment_picker swa_rna_erraser swa_rna_gagu_01_append swa_rna_gagu_02_prepend swa_rna_gagu_03_append_to_silent swa_rna_gagu_05_prepend_to_5primeterminus swa_rna_gagu_06_append_to_3primeterminus swa_rna_gagu_07_prepend_dinucleotide swa_rna_gagu_08_append_dinucleotide swa_rna_gagu_09_sample_virtual_ribose swa_rna_gagu_10_prepend_and_ccd_close swa_rna_gagu_11_append_and_ccd_close swa_rna_gagu_12_helix_addition swa_rna_gagu_13_chunk_combination_and_closure swa_rna_gagu_15_combine_long_loop_sampling swa_rna_gagu_16_prepend_dinucleotide_on_dinucleotide swa_rna_gagu_17_append_floating_base swa_rna_gagu_18_rebuild_bulge swa_rna_gagu_19_prepend_floating_base_by_jump swa_rna_gagu_20_append_floating_base_by_jump swa_rna_gagu_21_prepend_dinucleotide_on_dinucleotide_by_jump swa_rna_gagu_22_prepend_and_kic_close swa_rna_gagu_23_append_and_kic_close swa_rna_loop_sampler swm_add_rosettascripts swm_beta_peptide_loop swm_build_full_model swm_dna_bridge swm_dna_loop swm_general_polymer_sampler swm_l_rna swm_protein_CCDmove swm_protein_from_scratch swm_protein_loop_sampler swm_protein_move_inside_coiledcoil_by_bond swm_protein_move_inside_helix_by_bond swm_protein_preminimize swm_rna_base_pair_constraints swm_rna_checkpoint_partition swm_rna_fourwayjunction swm_rna_loop_design swm_rna_move_align_dock swm_rna_move_inside_helix_by_bond swm_rna_move_inside_helix_by_jump swm_rna_move_two_strands swm_rna_nickedhelix swm_rna_protonated_adenosine swm_rna_singleloop swm_rna_srl_triplet symmetry_multicomponent test1_benchmark test_computed_saxs_spectrum thermal_sampler zinc_heterodimer zinc_homodimer_setup
Test: mac.clang.python39.integration

Failed sub-tests (click for more details):
AlignPDBInfoToSequences AnchorFinder AnchoredPDBCreator BFactorSelector DNA_methylation FavorSequenceProfileMover HDXEnergy InterfaceAnalyzer InterfaceAnalyzer_metrics PDB_diagnostic ProQ RBOut RunSimpleMetric_b_factor_test SnugDock ThreadingInputter UBQ_E2_thioester UBQ_Gp_CYD-CYD UBQ_Gp_LYX-Cterm add_job_pair_data ambiguous_nmr_distance_constraint antibody_designer_camelid antibody_graft antibody_numbering_converter auto-drrafter_setup_run_R1 auto-drrafter_setup_run_R2 auto-drrafter_setup_run_R3 autosetup_metals_centroid backrub backrub_pilot batch_relax burial_measure_centroid buried_unsat_kinemage c-term_conjugation cart_min_glycans ccd_ends_graft_mover_rs centroid_from_fullatom cl_complex_rescore classic_relax_1a19 cluster_alns combine_silent coupled_moves create_clash-based_repack_shell cs_rosetta_rna cst_info cyclization cycpep_rigid_body_permutation_mover ddG_of_mutation density_refine design_glycans design_w_custom_palette-RNA dgdp_aio dgdp_script distances docking_ensemble docking_ensemble_prepack drrafter_error_estimation drrafter_run enzscore_filter_dimetal enzscore_filter_dimetal_sym enzscore_filter_ligand enzscore_filter_metal enzscore_filter_metal_sym erraser_minimize exclusively_shared_jumps farfar_mrna farnesyl fast_relax favor_coupling_tensor fix_alignment_to_match_pdb flexpepdock fold_and_dock ga_ligand_dock_macrocycle genkic_sugars glycan_anomers glycan_clash_check glycan_refinment glycan_relax glycan_tree_relax glycopeptidedocking glycopeptidedocking_diglyco_long hbs_design hotspot_stub_constraints hybridization identify_cdr_clusters ig_dump interface_energy iphold jd2test_PDBIO jd2test_PDBin_mmCIFout jd2test_PDBin_mmCIFout_extra_data_separate jd2test_mmCIFIO jd2test_mmCIFin_PDBout job_definition_script_vars jscore ligand_motif_design ligand_motif_identification ligand_water_docking loop_hash make_exemplar make_symmdef_file match_1c2t match_1n9l match_6cpa match_xml metal_setup metropolis_hastings mmtfIO_score_test mp_dock mp_dock_ensemble mp_dock_prepack mp_interface_statistics mp_loadtime mp_mutate_relax mp_mutate_repack mp_range_relax mp_relax mp_relax_w_ligand mp_score_jd2 mp_span_from_pdb mp_symdock mp_symmetry_load mp_transform mp_transform_optimize mp_vis_emb mpi_multistate_design mpil_find_pore_ahelical mpil_find_pore_bbarrel mpil_load_implicit_lipids mr_protocols multistage_rosetta_scripts mutate nucleobase_sample_around orbitals pH_mode per_residue_sc_sasa per_residue_solvent_exposure pertmin phosphonate pna_base_pairs pocket_measure pocket_relax pocket_suggest_targets protocol_metric range_relax_w_cst rb_recces readin_dna_rna_protein real_virt_mover recces_turner relax_w_allatom_cst rna_assemble rna_denovo rna_denovo_RNP_low_res rna_denovo_RNP_refine_native rna_denovo_bps rna_denovo_bps_fixed_ends rna_denovo_bps_helix_ends rna_denovo_dna_bridge rna_denovo_fragment_homology_exclusion rna_denovo_grid_vdw rna_denovo_new_FT_2in_dens rna_denovo_new_FT_5P_j12_leadzyme rna_denovo_new_FT_RNP_2prot_dens rna_denovo_new_FT_rna_two_chains rna_denovo_new_libs rna_design rna_farfar_noncanonical_hairpin rna_helix rna_minimize rna_motif rna_predict_chem_map rna_puzzle11_H2H3H4_run3_connectU40 rna_puzzle12_P5P6P7_DMS rna_puzzle5_P15P3P8_noP4P6_4RB_G208phosphate_ligation rna_puzzle6_U75G76A77_on_thread1 rna_puzzle6_j67_into_p6p7rigidbody_thread1 rna_ribosome_tether rna_score rna_screen_phosphates rnp_ddg_calc_mut rnp_ddg_calc_wt rnp_ddg_relax_command_1 rnp_ddg_relax_command_2 rosetta_scripts_jd3 rosie_ligand_docking rs_flexbbmoves sample_seq_from_probs sasa_metric_options secondary_structure_output seed_ensemble_JD2_JI sequence_tolerance sim_cryo simple_dna_test simple_glycosylation_alternate_AAs simple_metric_cache simple_metric_features simple_metric_filter simple_metrics simple_metrics_b_factor simple_metrics_in_protocols simple_metrics_per_residue site_constraint stepwise_lores struc_set_fragment_picker swa_rna_erraser swa_rna_gagu_01_append swa_rna_gagu_02_prepend swa_rna_gagu_03_append_to_silent swa_rna_gagu_05_prepend_to_5primeterminus swa_rna_gagu_06_append_to_3primeterminus swa_rna_gagu_07_prepend_dinucleotide swa_rna_gagu_08_append_dinucleotide swa_rna_gagu_09_sample_virtual_ribose swa_rna_gagu_10_prepend_and_ccd_close swa_rna_gagu_11_append_and_ccd_close swa_rna_gagu_12_helix_addition swa_rna_gagu_13_chunk_combination_and_closure swa_rna_gagu_15_combine_long_loop_sampling swa_rna_gagu_16_prepend_dinucleotide_on_dinucleotide swa_rna_gagu_17_append_floating_base swa_rna_gagu_18_rebuild_bulge swa_rna_gagu_19_prepend_floating_base_by_jump swa_rna_gagu_20_append_floating_base_by_jump swa_rna_gagu_21_prepend_dinucleotide_on_dinucleotide_by_jump swa_rna_gagu_22_prepend_and_kic_close swa_rna_gagu_23_append_and_kic_close swa_rna_loop_sampler swm_add_rosettascripts swm_beta_peptide_loop swm_build_full_model swm_dna_bridge swm_dna_loop swm_general_polymer_sampler swm_l_rna swm_protein_CCDmove swm_protein_from_scratch swm_protein_loop_sampler swm_protein_move_inside_coiledcoil_by_bond swm_protein_move_inside_helix_by_bond swm_protein_preminimize swm_rna_base_pair_constraints swm_rna_checkpoint_partition swm_rna_fourwayjunction swm_rna_loop_design swm_rna_move_align_dock swm_rna_move_inside_helix_by_bond swm_rna_move_inside_helix_by_jump swm_rna_move_two_strands swm_rna_nickedhelix swm_rna_protonated_adenosine swm_rna_singleloop swm_rna_srl_triplet symmetry_multicomponent test1_benchmark test_computed_saxs_spectrum thermal_sampler zinc_heterodimer zinc_homodimer_setup