「view this page in B3 βῆτα server」

Revisions №231

branch: release 「№231」
Commited by: Andrew Leaver-Fay
GitHub commit link: 「767c1ea25c572fbc」
Difference from previous tested commit:  code diff
Commit date: 2019-08-22 09:19:33

Fix bug: InterfaceGroupByVector order dependency (#4142) The InterfaceGroupByVector selector was sensitive to the order in which residues were presented it, failing to detect interactions between residue i in group 1 and residue j in group 2 if j < i. Why? The UpperEdgeGraph stores only the edges to higher- indexed nodes and is used for neighbor detection because it is fast to add edges to this kind of graph. It's not the right choice, however, if you're trying to iterate across all neighbors of a particular set of residues. Because the InterfaceGroupByVector class used this graph, it would miss residues at the interface between two sets if the lower-indexed residues were listed second; e.g. if you have a pose w/ chains A and B (and A comes first) and you created an IGBV where you said the two groups were chain B and chain A (in that order), then the IGBV would find no residues at the interface.

...