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Revisions №61911

branch: master 「№61911」
Commited by: John Wang
GitHub commit link: 「fc0fea1e324ec999」 「№6082」
Difference from previous tested commit:  code diff
Commit date: 2022-07-21 20:06:57
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
PyRosetta.notebook gcc-9.gcc.python37.PyRosetta.unit linux.clang.cxx11thread.serialization.python37.PyRosetta.unit linux.clang.python310.PyRosetta.unit linux.gcc.python36.PyRosetta.unit m1.clang.python310.PyRosetta.unit m1.clang.python38.PyRosetta.unit m1.clang.python39.PyRosetta.unit mac.clang.python310.PyRosetta.unit mac.clang.python38.PyRosetta.unit mac.clang.python39.PyRosetta.unit ubuntu-20.04.clang.python39.PyRosetta.unit ubuntu-22.04.clang.python39.PyRosetta.unit build.clean.debug alpine.gcc.build.debug clang-10.clang.cxx11thread.mpi.serialization.tensorflow.build.debug gcc-10.gcc.build.debug gcc-11.gcc.python39.build.debug gcc-9.gcc.build.debug linux.clang.bcl.build.debug linux.clang.hdf5.build.debug mysql postgres linux.clang.python36.build.debug linux.zeromq.debug linux.gcc.bcl.build.debug mpi mpi.serialization linux.icc.build.debug mac.clang.bcl.build.debug OpenCL ubuntu.clang.bcl.build.debug ubuntu.gcc.bcl.build.debug build.header build.levels build.ninja_debug graphics static mac.clang.static.build.release beautification code_quality.clang_analysis code_quality.clang_tidy code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.addsan integration.mpi integration.release_debug integration.tensorflow integration.thread integration.tutorials integration.ubsan integration.valgrind integration maintenance.documentation performance profile linux.clang.python310.release.PyRosetta.Debug linux.clang.python36.release.PyRosetta.Debug linux.clang.python37.release.PyRosetta.Debug linux.clang.python38.release.PyRosetta.Debug linux.clang.python39.release.PyRosetta.Debug mac.clang.python310.release.PyRosetta.Debug mac.clang.python36.release.PyRosetta.Debug mac.clang.python38.release.PyRosetta.Debug mac.clang.python39.release.PyRosetta.Debug linux.clang.python310.release.PyRosetta.MinSizeRel linux.clang.python36.release.PyRosetta.MinSizeRel linux.clang.python37.release.PyRosetta.MinSizeRel linux.clang.python38.release.PyRosetta.MinSizeRel linux.clang.python39.release.PyRosetta.MinSizeRel m1.clang.python310.release.PyRosetta.MinSizeRel m1.clang.python38.release.PyRosetta.MinSizeRel m1.clang.python39.release.PyRosetta.MinSizeRel mac.clang.python310.release.PyRosetta.MinSizeRel mac.clang.python38.release.PyRosetta.MinSizeRel mac.clang.python39.release.PyRosetta.MinSizeRel ubuntu.clang.python310.release.PyRosetta.MinSizeRel ubuntu.clang.python36.release.PyRosetta.MinSizeRel ubuntu.clang.python37.release.PyRosetta.MinSizeRel ubuntu.clang.python38.release.PyRosetta.MinSizeRel ubuntu.clang.python39.release.PyRosetta.MinSizeRel linux.clang.python310.release.PyRosetta.Release linux.clang.python36.release.PyRosetta.Release linux.clang.python37.release.PyRosetta.Release linux.clang.python38.release.PyRosetta.Release linux.clang.python39.release.PyRosetta.Release m1.clang.python310.release.PyRosetta.Release m1.clang.python38.release.PyRosetta.Release m1.clang.python39.release.PyRosetta.Release mac.clang.python310.release.PyRosetta.Release mac.clang.python36.release.PyRosetta.Release mac.clang.python38.release.PyRosetta.Release mac.clang.python39.release.PyRosetta.Release ubuntu.clang.python310.release.PyRosetta.Release ubuntu.clang.python36.release.PyRosetta.Release ubuntu.clang.python37.release.PyRosetta.Release ubuntu.clang.python38.release.PyRosetta.Release ubuntu.clang.python39.release.PyRosetta.Release release.PyRosetta.conda.Release release.source scientific.FlexPepDock.debug scientific.FlexPepDock scientific.RosettaCM.debug scientific.RosettaCM scientific.abinitio_RosettaNMR_pcs.debug scientific.abinitio_RosettaNMR_pcs scientific.abinitio_RosettaNMR_rdc.debug scientific.abinitio_RosettaNMR_rdc scientific.antibody_grafting.debug scientific.antibody_grafting scientific.antibody_h3_modeling.debug scientific.antibody_h3_modeling scientific.antibody_snugdock.debug scientific.antibody_snugdock scientific.cofactor_binding_sites.debug scientific.cofactor_binding_sites scientific.ddg_ala_scan.debug scientific.ddg_ala_scan scientific.design_fast.debug scientific.design_fast scientific.docking.debug scientific.docking_ensemble.debug scientific.docking_ensemble scientific.docking scientific.enzyme_design.debug scientific.enzyme_design scientific.fragments_picking.debug scientific.fragments_picking scientific.glycan_dock.debug scientific.glycan_dock scientific.ligand_docking.debug scientific.ligand_docking scientific.ligand_scoring_ranking.debug scientific.ligand_scoring_ranking scientific.loop_modeling_ccd_12res.debug scientific.loop_modeling_ccd_12res scientific.loop_modeling_kic_12res.debug scientific.loop_modeling_kic_12res scientific.loop_modeling_kic_fragments_12res.debug scientific.loop_modeling_kic_fragments_12res scientific.loop_modeling_ngk_12res.debug scientific.loop_modeling_ngk_12res scientific.make_fragments.debug scientific.make_fragments scientific.mhc_epitope_energy.debug scientific.mhc_epitope_energy scientific.mp_dock.debug scientific.mp_dock scientific.mp_domain_assembly.debug scientific.mp_domain_assembly scientific.mp_f19_ddG_of_mutation.debug scientific.mp_f19_ddG_of_mutation scientific.mp_f19_decoy_discrimination.debug scientific.mp_f19_decoy_discrimination scientific.mp_f19_sequence_recovery.debug scientific.mp_f19_sequence_recovery scientific.mp_f19_tilt_angle.debug scientific.mp_f19_tilt_angle scientific.mp_lipid_acc.debug scientific.mp_lipid_acc scientific.mp_relax.debug scientific.mp_relax scientific.mp_symdock.debug scientific.mp_symdock scientific.peptide_pnear_vs_ic50.debug scientific.peptide_pnear_vs_ic50 scientific.protein_data_bank_diagnostic.cif scientific.protein_data_bank_diagnostic.full scientific.relax_cartesian.debug scientific.relax_cartesian scientific.relax_fast.debug scientific.relax_fast_5iter.debug scientific.relax_fast_5iter scientific.relax_fast scientific.rna_denovo_favorites.debug scientific.rna_denovo_favorites scientific.sb_franklin2019_mpddg_cartesian.debug scientific.sb_franklin2019_mpddg_cartesian scientific.sb_ref2015_docking.debug scientific.sb_ref2015_docking scientific.sb_ref2015_fast_design.debug scientific.sb_ref2015_fast_design scientific.sb_ref2015_loop_modeling_ccd_12res.debug scientific.sb_ref2015_loop_modeling_ccd_12res scientific.sb_ref2015_loop_modeling_kic_12res.debug scientific.sb_ref2015_loop_modeling_kic_12res scientific.sb_ref2015_loop_modeling_kic_fragments_12res.debug scientific.sb_ref2015_loop_modeling_kic_fragments_12res scientific.sb_ref2015_loop_modeling_ngk_12res.debug scientific.sb_ref2015_loop_modeling_ngk_12res scientific.sb_ref2015_relax_cartesian.debug scientific.sb_ref2015_relax_cartesian scientific.sb_ref2015_relax_fast.debug scientific.sb_ref2015_relax_fast_5iter.debug scientific.sb_ref2015_relax_fast_5iter scientific.sb_ref2015_relax_fast scientific.sb_score12_fast_design.debug scientific.sb_talaris13_docking.debug scientific.sb_talaris13_docking scientific.sb_talaris13_fast_design.debug scientific.sb_talaris13_fast_design scientific.sb_talaris13_loop_modeling_ccd_12res.debug scientific.sb_talaris13_loop_modeling_ccd_12res scientific.sb_talaris13_loop_modeling_kic_12res.debug scientific.sb_talaris13_loop_modeling_kic_12res scientific.sb_talaris13_loop_modeling_kic_fragments_12res.debug scientific.sb_talaris13_loop_modeling_kic_fragments_12res scientific.sb_talaris13_loop_modeling_ngk_12res.debug scientific.sb_talaris13_loop_modeling_ngk_12res scientific.sb_talaris13_relax_cartesian.debug scientific.sb_talaris13_relax_cartesian scientific.sb_talaris13_relax_fast.debug scientific.sb_talaris13_relax_fast_5iter.debug scientific.sb_talaris13_relax_fast_5iter scientific.sb_talaris13_relax_fast scientific.sb_talaris14_docking.debug scientific.sb_talaris14_docking scientific.sb_talaris14_fast_design.debug scientific.sb_talaris14_fast_design scientific.sb_talaris14_loop_modeling_kic_12res.debug scientific.sb_talaris14_loop_modeling_kic_12res scientific.sb_talaris14_loop_modeling_kic_fragments_12res.debug scientific.sb_talaris14_loop_modeling_kic_fragments_12res scientific.sb_talaris14_loop_modeling_ngk_12res.debug scientific.sb_talaris14_loop_modeling_ngk_12res scientific.sewing.debug scientific.sewing scientific.simple_cycpep_predict.debug scientific.simple_cycpep_predict scientific.stepwise_rna_favorites.debug scientific.stepwise_rna_favorites linux.clang.score linux.gcc.score mac.clang.score linux.scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify unit.addsan linux.clang.unit.release linux.gcc.unit.release mac.clang.unit.release unit.ubsan unit.valgrind gcc-10.gcc.unit gcc-11.gcc.python39.unit gcc-9.gcc.unit m1.clang.python39.unit ubuntu-20.04.clang.python39.unit ubuntu-20.04.gcc.python39.unit ubuntu-22.04.clang.python39.unit ubuntu-22.04.gcc.python39.unit util.apps windows.build.debug windows.build.release

Merge pull request #6082 from RosettaCommons/revert-6081-revert-5520-jyjwang/degreaser-fresh fixed things so that the tests that were broken passed. main culprits: unused variables / functions. annoying fix: indexing with Size instead of SSize. Thanks Sergey for checking in on the original PR ! Revert "Revert "Degreaser v 1.0""

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Test: linux.clang.integration.tutorials

Failed sub-tests (click for more details):
Protein-Protein-Docking
Test: ubuntu.gcc.integration.ubsan

Failed sub-tests (click for more details):
simple_cycpep_predict_square_pyramidal_metal
Test: mac.clang.python39.integration

Failed sub-tests (click for more details):
match_xml output_schema test_degreaser
Test: linux.clang.profile

Failed sub-tests (click for more details):
AnchoredDesign monte_carlo_hbnet
Test: linux.clang.python36.scientific.make_fragments.debug

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Test: linux.clang.python36.scientific.make_fragments

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Test: linux.clang.python36.scientific.mp_lipid_acc

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Test: linux.clang.python36.scientific.sb_talaris13_relax_fast

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Test: linux.clang.python36.scientific.sb_talaris14_fast_design

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