Revisions №61843

branch: master 「№61843」
Commited by: Davide Sala
GitHub commit link: 「40397749c6e2b105」「№5869」
Difference from previous tested commit: code diff
Commit date: 2022-03-02 11:29:40

Merge pull request #5869 from RosettaCommons/davidesala/CCM_release documentation improved

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Test: linux.gcc.integration.valgrind

Failed sub-tests (click for more details):
AddConstraintsToCurrentConformationMover ConsensusLoopDesign ContactMolecularSurface DumpTrajectoryEnergy DumpTrajectoryEnergy_packing Enzrevert_xml FilterReportAsPoseExtraScoresMover FlipChirality HelixBendFilter InterfaceDdG LayerDesign LayerDesign_symm LayerSelector LoopAnalyzer LoopLengthChange ModifyVariantTypeMover MutateResidue_selector PeptideCyclizeMover PeptideStubMover_prependRepeat PolarDesign2019 RBOut ReadResfile_with_selector SSElementSelector SecondaryStructureFilter StrandCurvatureByLevels StrandHelixGeometryFilter TryDisulfPermutations UnsatSelector add_constraints_to_current_conformation add_helix_sequence_constraints add_helix_sequence_constraints_advanced_setup add_job_pair_data antibody_designer_xml autosetup_metals_centroid backbonegridsampler backbonegridsampler_multiresidue backbonegridsampler_nstruct_mode backrub backrub_interface_ddG bin_initialization bin_perturbation binselector binselector_probins bundlegridsampler bundlegridsampler_composition_energy bundlegridsampler_composition_energy_fract_range bundlegridsampler_copy_pitch bundlegridsampler_design bundlegridsampler_design_nstruct_mode bundlegridsampler_epsilon bundlegridsampler_multirepeat bundlegridsampler_z0_offset bundlegridsampler_z1_offset buried_area_filter buried_unsat_voids_hbnet_design buried_unsat_voids_hbnet_design_symm cart_min_glycans ccd_ends_graft_mover_rs centroid_from_fullatom cleanAlignment coarse_rna_scoring composition_energy_layers constraints_metric control_flow_rs copy_rotamer_mover create_sequence_motif crosslinkermover_1_4_bbmb_asymm crosslinkermover_1_4_bbmb_c2_symmetry crosslinkermover_1_4_bbmb_s2_symm crosslinkermover_octahedral crosslinkermover_octahedral_s2_symm crosslinkermover_square_planar crosslinkermover_square_planar_d2_symm crosslinkermover_square_pyramidal crosslinkermover_tetrahedral_metal crosslinkermover_tetrahedral_metal_asp crosslinkermover_tetrahedral_metal_c2_symmetry crosslinkermover_tetrahedral_metal_d2_symmetry crosslinkermover_trigonal_planar crosslinkermover_trigonal_planar_c3_symm crosslinkermover_trigonal_pyramidal crosslinkermover_trigonal_pyramidal_c3_symm cst_info custom_basetype_packer_palette cycpep_design_pipeline cycpep_rdkit_metric cycpep_rigid_body_permutation_mover d_workflow database_session_resource ddG_scan ddG_sym design_w_custom_palette-CAAs design_w_custom_palette-NCAAs design_w_custom_palette-RNA dna_interface_design dock_with_hotspot_place_simultaneously enumerative_sampling enzscore_filter_dimetal enzscore_filter_dimetal_sym enzscore_filter_ligand enzscore_filter_metal enzscore_filter_metal_sym evolution farnesyl favor_coupling_tensor favor_native_residue features features_parallel features_pdb fold_from_loops fuzzy ga_ligand_dock ga_ligand_dock_amino_acid genkic_bin_perturbing genkic_bin_sampling genkic_bin_setting genkic_dihedral_copying genkic_lowmemory_mode genkic_rama_filter genkic_sugars glycan_anomers glycan_refinment glycan_sequon_scanner glycan_tree_relax grid_scores_features hbnet hbnet_asymm hbnet_energy hbnet_energy_rosettascripts_linear hbnet_energy_symm hbnet_use_input_rot hbondstoresidue_selector helical_bundle helical_bundle_nonideal homodimer_fnd_ref2015_memb hotspot_graft hts_io hybridization interaction_graph_summary_metric job_definition_script_vars kinemage_grid_output ligand_database_io ligand_dock_ensemble ligand_dock_grid ligand_dock_script ligand_motif_design ligand_water_docking longest_continuous_polar_segment_filter loop_creation make_and_perturb_bundle_multirepeat make_symmdef_file metropolis_hastings mf_fixbb_des mf_fixbb_sc mf_flexbb_sc mhc_epitope mhc_epitope_nmer_preload minimize_with_elec_dens mirror_symm motif_score_filter mp_ligand_interface mp_quick_relax_ref2015_memb mp_relax mp_span_ang_ref2015_memb mp_symmetry_load multistage_rosetta_scripts_clustering netcharge_design netcharge_design_symm nonideal_rtmin pertmin perturb_helical_bundle perturb_helical_bundle_copying_pitch perturb_helical_bundle_epsilon perturb_helical_bundle_setting perturb_helical_bundle_z_offset phiselector place_simultaneously pna_base_pairs pose_sewing posttranslationalmod_io ppi_v3_suiteA ppi_v3_suiteB ppi_v3_suiteC ppi_v3_suiteD ppi_v3_suiteE ppi_v3_suiteF ppi_v3_suiteG ppk protocol_metric rama_mutation_selector rdkit_metrics real_virt_mover recon_design referencepose_mutateresidue remodel_disulfides_rosettascripts remodel_helical_repeat repack_with_elec_dens repeat_propagate repeat_propagate_v2 repeat_propagate_v3 repeat_relax res_lipo_ref2015_memb resource_database_locator rollmover rosetta_scripts_hbond_options rosetta_scripts_include rosetta_scripts_jd3 rosetta_scripts_loops rosetta_scripts_setup rosie_ligand_docking rotamer_probability rs_flexbbmoves rs_loophash sasa_metric_options score12_docking score_only_silence sdf_reader secondary_structure_output selected_residue_count_metric sequence_profile_constraints set_torsion simple_glycosylation simple_grafting_movers simple_hbondstoatom simple_metric_cache simple_metric_features simple_metric_filter simple_metrics simple_metrics_in_protocols simple_metrics_per_residue small_molecule_lattice_dock smallmover_resselector splice_in_4loops_longer splice_in_4loops_shorter splice_out_H1_H2_longer splice_out_H1_H2_same splice_out_H1_H2_shorter splice_out_H3_longer splice_out_H3_same splice_out_H3_shorter splice_out_L1_L2_longer splice_out_L1_L2_same splice_out_L1_L2_shorter splice_out_L3_longer splice_out_L3_same splice_out_L3_shorter startfrom_file stored_residue_subset swm_add_rosettascripts symm_rotamer_boltzmann symmetric_cycpep_align_and_symmetrize symmetrical_residue_selector symmetry_data_resource target_clash task_selector tna_base_pairs voids_penalty_energy_design voids_penalty_energy_design_symmetry write_mol_file

Test: linux.gcc.unit.valgrind