Merge pull request #5108 from RosettaCommons/vmullig/update_energy_method_tracers
Update tracer names for classes in core/energy_methods
This is a follow-up PR to #5103 . That PR corrected the namespaces for files in `core/energy_methods`, but was not intended to alter output (so that I could confirm that there were no integration test changes). This replaces the tracer names with ones reflecting the new namespaces, which _will_ change a lot of integration tests (but trivially in each case).
<b>Note:</b> The initial diff includes all the changes from PR #5103, since this is branched off of that branch. Once #5103 is merged, I will merge the latest master into this branch to make it clearer that the only changes are from commit d6df11b, only updating tracer names.
- [x] PR #5103 must be merged before this PR.
- [x] Update integration tests that selectively unmute tracers.