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Revisions №61388

branch: master 「№61388」
Commited by: Rocco Moretti
GitHub commit link: 「09a361a3e8078743」 「№4929」
Difference from previous tested commit:  code diff
Commit date: 2020-08-27 12:41:11
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
PyRosetta4.notebook gcc-9.gcc.python37.PyRosetta4.unit linux.clang.cxx11thread.serialization.python37.PyRosetta4.unit linux.gcc.python36.PyRosetta4.unit mac.PyRosetta.unit build.clean.debug alpine.gcc.build.debug clang-10.clang.cxx11thread.mpi.serialization.tensorflow.build.debug gcc-9.gcc.build.debug mysql postgres linux.clang.python36.build.debug linux.zeromq.debug mpi mpi.serialization linux.icc.build.debug OpenCL mac.clang.python36.build.debug build.header build.levels build.ninja_debug graphics static mac.clang.static.build.release build.xcode beautification code_quality.clang_analysis code_quality.clang_tidy code_quality.cppcheck serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration performance profile release.source scientific.antibody_grafting.debug scientific.antibody_grafting scientific.peptide_pnear_vs_ic50.beta.debug scientific.peptide_pnear_vs_ic50.beta scientific.peptide_pnear_vs_ic50.debug scientific.peptide_pnear_vs_ic50 scientific.relax_fast_5iter scientific.simple_cycpep_predict.debug scientific.simple_cycpep_predict linux.clang.score linux.gcc.score mac.clang.score linux.scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify linux.clang.unit.release linux.gcc.unit.release gcc-9.gcc.unit util.apps

Merge pull request #4929 from RosettaCommons/roccomoretti/no_ascii_options Try to give better feedback with non-ASCII options. An error that comes up semi-regularly is where someone uses an en-dash instead of a hyphen in Rosetta options. (Certain Word processors like autoconverting things.) Adjust option parsing to try to better highlight cases where this may be happening. Additionally, we can handle dos/unix file ending issues in option files by broadening the meaning of 'whitespace'.

Vikram K. Mulligan 10 months
Note: tests peptide_pnear_vs_ic50.beta.debug and peptide_pnear_vs_ic50.beta are known failures at this time. They should not fail to *run*, but on analysis, they do fail. Tests simple_cycpep_predict, simple_cycpep_predict.debug, peptide_pnear_vs_ic50, and peptide_pnear_vs_ic50.debug should all run and pass.
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Test: mac.clang.python27.build.xcode

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Test: linux.gcc.code_quality.beautification

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Test: mac.clang.integration

Failed sub-tests (click for more details):
database_md5
Test: linux.clang.profile

Failed sub-tests (click for more details):
jd2test
Test: linux.gcc.cxx11thread.mpi.serialization.scientific.peptide_pnear_vs_ic50.beta.debug

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Test: linux.gcc.cxx11thread.mpi.serialization.scientific.peptide_pnear_vs_ic50.beta

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Test: linux.gcc.cxx11thread.mpi.serialization.scientific.simple_cycpep_predict

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