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Revisions №61308

branch: master 「№61308」
Commited by: Vikram K. Mulligan
GitHub commit link: 「f07b96794c9915d7」 「№4773」
Difference from previous tested commit:  code diff
Commit date: 2020-06-08 14:10:01
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
PyRosetta4.notebook gcc-9.gcc.python37.PyRosetta4.unit linux.clang.cxx11thread.serialization.python37.PyRosetta4.unit linux.gcc.python36.PyRosetta4.unit mac.PyRosetta.unit build.clean.debug alpine.gcc.build.debug clang-10.clang.cxx11thread.mpi.serialization.tensorflow.build.debug gcc-9.gcc.build.debug mysql postgres linux.clang.python36.build.debug linux.zeromq.debug mpi mpi.serialization linux.icc.build.debug OpenCL mac.clang.python36.build.debug build.header build.levels build.ninja_debug graphics static mac.clang.static.build.release build.xcode beautification code_quality.clang_analysis code_quality.clang_tidy code_quality.cppcheck serialization code_quality.submodule_regression integration.addsan integration.mpi integration.release_debug integration.tensorflow integration.thread integration.tutorials integration.ubsan integration maintenance.documentation performance profile linux.clang.python27.release.PyRosetta4.Debug linux.clang.python35.release.PyRosetta4.Debug linux.clang.python36.release.PyRosetta4.Debug linux.clang.python37.release.PyRosetta4.Debug linux.clang.python27.release.PyRosetta4.MinSizeRel linux.clang.python35.release.PyRosetta4.MinSizeRel linux.clang.python36.release.PyRosetta4.MinSizeRel linux.clang.python37.release.PyRosetta4.MinSizeRel ubuntu.clang.python27.release.PyRosetta4.MinSizeRel ubuntu.clang.python35.release.PyRosetta4.MinSizeRel ubuntu.clang.python36.release.PyRosetta4.MinSizeRel ubuntu.clang.python37.release.PyRosetta4.MinSizeRel linux.clang.python27.release.PyRosetta4.Release linux.clang.python35.release.PyRosetta4.Release linux.clang.python36.release.PyRosetta4.Release linux.clang.python37.release.PyRosetta4.Release ubuntu.clang.python27.release.PyRosetta4.Release ubuntu.clang.python35.release.PyRosetta4.Release ubuntu.clang.python36.release.PyRosetta4.Release ubuntu.clang.python37.release.PyRosetta4.Release release.PyRosetta4.conda.Release release.source scientific.antibody_grafting.debug scientific.antibody_grafting scientific.antibody_h3_modeling.debug scientific.antibody_snugdock.debug scientific.cofactor_binding_sites.debug scientific.cofactor_binding_sites scientific.ddg_ala_scan.debug scientific.ddg_ala_scan scientific.dock_glycans.debug scientific.docking.debug scientific.enzyme_design scientific.fragments_picking.debug scientific.fragments_picking scientific.ligand_docking.debug scientific.ligand_scoring_ranking.debug scientific.ligand_scoring_ranking scientific.loop_modeling_kic_12res.debug scientific.loop_modeling_kic_fragments_12res.debug scientific.mhc_epitope_energy.debug scientific.mhc_epitope_energy scientific.mp_dock.debug scientific.mp_dock scientific.mp_domain_assembly.debug scientific.mp_f19_ddG_of_mutation scientific.mp_f19_decoy_discrimination.debug scientific.mp_f19_decoy_discrimination scientific.mp_f19_energy_landscape.debug scientific.mp_f19_energy_landscape scientific.mp_f19_sequence_recovery scientific.mp_lipid_acc.debug scientific.mp_lipid_acc scientific.mp_relax.debug scientific.mp_symdock.debug scientific.protein_data_bank_diagnostic.full scientific.relax_cartesian.debug scientific.relax_fast.debug scientific.relax_fast_5iter.debug scientific.relax_fast scientific.rna_denovo_favorites.debug scientific.rna_denovo_favorites scientific.sewing.debug scientific.sewing scientific.simple_cycpep_predict scientific.stepwise_rna_favorites.debug linux.clang.score linux.gcc.score mac.clang.score linux.scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify unit.addsan linux.clang.unit.release linux.gcc.unit.release unit.ubsan gcc-9.gcc.unit util.apps

Merge pull request #4773 from RosettaCommons/vmullig/skip_submodule_update_with_nover_option Two small tweaks to scons build system This pull request: - Alters the behaviour of the --nover flag, so that in addition to skipping the versioning script, it skips the submodule update script. This saves time on slower filesystems during rapid rounds of development and compilation, if the developer knows that these submodules do not need to be updated. - Updates the help that one sees with `./scons.py --help` to: - Add examples for mpi, serialization, and cxx11thread builds. - Add the recommended default compilation command to build vanilla Rosetta for production runs. - Clarifies that `-j` accelerates _builds_ and not _Rosetta execution_, while `extras=mpi` or `extras=cxx11thread` can accelerate _Rosetta execution_ and not _builds_. - Adds the `--nover` flag to the help.

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