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Revisions №61162

branch: master 「№61162」
Commited by: Labonte
GitHub commit link: 「694df237d54d4f19」 「№4490」
Difference from previous tested commit:  code diff
Commit date: 2020-03-04 13:17:53
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
PyRosetta4.notebook gcc-9.gcc.python37.PyRosetta4.unit linux.clang.cxx11thread.serialization.python37.PyRosetta4.unit linux.gcc.python36.PyRosetta4.unit mac.PyRosetta.unit build.clean.debug build.cppcheck alpine.gcc.build.debug gcc-9.gcc.build.debug mysql postgres linux.clang.python36.build.debug linux.zeromq.debug mpi mpi.serialization linux.icc.build.debug OpenCL mac.clang.python36.build.debug build.header build.levels build.ninja_debug graphics static build.xcode beautification code_quality.clang_analysis serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration performance profile release.source linux.clang.score linux.gcc.score mac.clang.score linux.scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify linux.clang.unit.release linux.gcc.unit.release gcc-9.gcc.unit util.apps

Merge pull request #4490 from RosettaCommons/Add-params-of-Aldopentofuranosyls-to-Database Add Aldopentofuranosyls to Database Add to5-alpha/beta-D-Arabinofuranosyls based on the to5-L-Arabinofuranosyls already present in the database (bond angles and torsions angles conform to the two exisiting files). Those files are further taken as an example .params file for to2- and to3- arabinofuranosyls as well as other aldopentofuranosyl parameter files.

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Test: mac.clang.python27.build.xcode

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Test: mac.clang.integration

Failed sub-tests (click for more details):
c-term_conjugation design_glycans
Test: linux.clang.performance

Failed sub-tests (click for more details):
core_pack_denseig_current_default_sfxn
Test: gcc-9.gcc.unit

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Test: mac.clang.unit

Failed sub-tests (click for more details):
core:CenRotModelEnergyTests:test_cen_rot_atomtree_min core:CenRotModelEnergyTests:test_cen_rot_cart_min core:CenRotModelEnergyTests:test_cen_rot_dun core:CenRotModelEnergyTests:test_cen_rot_pair_env_energy core:CenRotModelEnergyTests:test_cen_rot_repack core:CenRotModelEnergyTests:test_cen_rot_vdw core:CyclicGeometry_peptoid_Tests:test_cyclic_permutation_beta_nov15 core:CyclicGeometry_peptoid_Tests:test_cyclic_permutation_cart_bonded core:CyclicGeometry_peptoid_Tests:test_cyclic_permutation_current_default_scorefxn core:CyclicGeometry_peptoid_Tests:test_cyclic_permutation_dslf_fa13 core:CyclicGeometry_peptoid_Tests:test_cyclic_permutation_fa_atr core:CyclicGeometry_peptoid_Tests:test_cyclic_permutation_fa_dun core:CyclicGeometry_peptoid_Tests:test_cyclic_permutation_fa_elec core:CyclicGeometry_peptoid_Tests:test_cyclic_permutation_fa_intra_rep core:CyclicGeometry_peptoid_Tests:test_cyclic_permutation_fa_intra_sol_xover4 core:CyclicGeometry_peptoid_Tests:test_cyclic_permutation_fa_rep core:CyclicGeometry_peptoid_Tests:test_cyclic_permutation_fa_sol core:CyclicGeometry_peptoid_Tests:test_cyclic_permutation_hbonds core:CyclicGeometry_peptoid_Tests:test_cyclic_permutation_lk_ball_wtd core:CyclicGeometry_peptoid_Tests:test_cyclic_permutation_omega core:CyclicGeometry_peptoid_Tests:test_cyclic_permutation_p_aa_pp core:CyclicGeometry_peptoid_Tests:test_cyclic_permutation_pro_close core:CyclicGeometry_peptoid_Tests:test_cyclic_permutation_rama core:CyclicGeometry_peptoid_Tests:test_cyclic_permutation_rama_prepro core:CyclicGeometry_peptoid_Tests:test_cyclic_permutation_yhh_planarity core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_beta_nov16 core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_cart_bonded core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_current_default_scorefxn core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_dslf_fa13 core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_atr core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_dun_dev core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_dun_rot core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_dun_semi core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_elec core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_intra_atr_xover4 core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_intra_elec core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_intra_rep core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_intra_rep_xover4 core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_intra_sol_xover4 core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_rep core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_fa_sol core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_hbonds core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_hxl_tors core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_lk_ball core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_lk_ball_bridge core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_lk_ball_bridge_uncpl core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_lk_ball_iso core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_omega core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_p_aa_pp core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_pro_close core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_rama core:CyclicGeometry_peptoid_beta_Tests:test_cyclic_permutation_rama_prepro core:Dunbrack2002Test:test_chi_derivatives_w_dunE core:Dunbrack2002Test:test_d_equiv core:Dunbrack2002Test:test_d_equiv_NEUTRALS core:Dunbrack2002Test:test_dunbrack_best_rotamer_energy core:Dunbrack2002Test:test_dunbrack_get_rotamer_probability core:Dunbrack2002Test:test_dunbrack_rotamers core:Dunbrack2002Test:test_phipsi_derivatives_w_dunE core:DunbrackEnergyTests:test_get_bb_bins_range core:DunbrackEnergyTests:test_peptoid_energy_snap core:DunbrackEnergyTests_oligourea:test_beta_aa_dunbrack_scoring core:DunbrackEnergyTests_oligourea:test_oligourea_dunbrack_derivs core:DunbrackEnergyTests_oligourea:test_oligourea_dunbrack_derivs2 core:DunbrackEnergyTests_oligourea:test_oligourea_dunbrack_scoring core:DunbrackEnergyTests_oligourea:test_oligourea_dunbrack_scoring2 core:DunbrackEnergyTests_oligourea:test_oligourea_proline_pack core:DunbrackEnergyTests_oligourea:test_oligourea_proline_score core:DunbrackEnergyTests_peptoid:test_peptoid_dunbrack_derivs core:DunbrackEnergyTests_peptoid:test_peptoid_dunbrack_scoring core:FASTERAnnealerTests:test_instantiate_FASTER_annealer protocols:EnergyBasedClusteringTests_oligourea:test_cartesian_cluster_cyclic_oligourea protocols:EnergyBasedClusteringTests_oligourea:test_cartesian_cluster_cyclic_oligourea_s2_symm protocols:EnergyBasedClusteringTests_oligourea:test_dihedral_cluster_cyclic_oligourea protocols:FastRelaxTests:test_beta_custom_script protocols:FastRelaxTests:test_fastrelax_B3N protocols:FastRelaxTests:test_fastrelax_B3N_mod_termini protocols:FastRelaxTests:test_legacy_dualspace_script protocols:FastRelaxTests:test_legacy_script protocols:FastRelaxTests:test_local_script protocols:FastRelaxTests:test_nonexistent_local_script protocols:FragmentCandidatesTests:test_DiversifyCrmsdByClustering protocols:FragmentCandidatesTests:test_DiversifyCrmsdSelector protocols:FragmentCandidatesTests:test_DiversifyDihedralsSelector protocols:FragmentCandidatesTests:test_read_vall2 protocols:FragmentCandidatesTests:test_read_vall_fragments