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Revisions №61144

branch: master 「№61144」
Commited by: Vikram K. Mulligan
GitHub commit link: 「321d95b6c7a2f2df」 「№4509」
Difference from previous tested commit:  code diff
Commit date: 2020-02-19 19:48:15
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
PyRosetta4.notebook gcc-9.gcc.python37.PyRosetta4.unit linux.clang.cxx11thread.serialization.python37.PyRosetta4.unit linux.gcc.python36.PyRosetta4.unit mac.PyRosetta.unit build.clean.debug build.cppcheck alpine.gcc.build.debug gcc-9.gcc.build.debug mysql postgres linux.clang.python36.build.debug linux.zeromq.debug mpi mpi.serialization linux.icc.build.debug OpenCL mac.clang.python36.build.debug build.header build.levels build.ninja_debug graphics static mac.clang.static.build.release build.xcode beautification code_quality.clang_analysis code_quality.clang_tidy serialization code_quality.submodule_regression integration.addsan integration.mpi integration.release_debug integration.tensorflow integration.thread integration.tutorials integration.ubsan integration maintenance.documentation performance profile linux.clang.python36.release.PyRosetta4.Debug linux.clang.python37.release.PyRosetta4.Debug mac.clang.python37.release.PyRosetta4.Debug linux.clang.python27.release.PyRosetta4.MinSizeRel linux.clang.python35.release.PyRosetta4.MinSizeRel linux.clang.python36.release.PyRosetta4.MinSizeRel ubuntu.clang.python27.release.PyRosetta4.MinSizeRel ubuntu.clang.python35.release.PyRosetta4.MinSizeRel ubuntu.clang.python36.release.PyRosetta4.MinSizeRel ubuntu.clang.python37.release.PyRosetta4.MinSizeRel linux.clang.python37.release.PyRosetta4.Release ubuntu.clang.python27.release.PyRosetta4.Release ubuntu.clang.python35.release.PyRosetta4.Release ubuntu.clang.python36.release.PyRosetta4.Release ubuntu.clang.python37.release.PyRosetta4.Release release.PyRosetta4.conda.Release release.source scientific.antibody_grafting.debug scientific.antibody_grafting scientific.docking scientific.mhc_epitope_energy scientific.mp_domain_assembly scientific.simple_cycpep_predict.debug scientific.simple_cycpep_predict linux.clang.score linux.gcc.score mac.clang.score linux.scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify unit.addsan linux.clang.unit.release linux.gcc.unit.release unit.ubsan unit.valgrind gcc-9.gcc.unit util.apps

Merge pull request #4509 from RosettaCommons/vmullig/fix_simple_cycpep_predict_bug Fix a bug in simple_cycpep_predict with disulfides in MPI mode The addition of the DISULFIDE variants to the native pose when predicting structures of disulfide-cyclized peptides was messed up, but only in MPI mode. The issue was that the SimpleCycpepPredictApplication object is initialized differently in the non-MPI mode (reading directly from disk) or in MPI mode (one process reads from disk and broadcasts stuff to all other processes). The initialization of the native pose was depending on information that had not yet been received by all processes in the latter case (the sequence length). TODO: - [x] Check the `simple_cycpep_predict` scientific test (queued here: https://b3.graylab.jhu.edu/revision/commits/14718 ). --> Yes, this runs correctly still.