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Revisions №61124

branch: master 「№61124」
Commited by: Steven Lewis
GitHub commit link: 「aaafe23d795c1705」 「№4464」
Difference from previous tested commit:  code diff
Commit date: 2020-02-01 01:53:32
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
PyRosetta4.notebook gcc-9.gcc.python37.PyRosetta4.unit linux.clang.cxx11thread.serialization.python37.PyRosetta4.unit linux.gcc.python36.PyRosetta4.unit mac.PyRosetta.unit build.clean.debug build.cppcheck alpine.gcc.build.debug gcc-9.gcc.build.debug mysql postgres linux.clang.python36.build.debug linux.zeromq.debug mpi mpi.serialization linux.icc.build.debug OpenCL mac.clang.python36.build.debug build.header build.levels build.ninja_debug graphics static mac.clang.static.build.release linux.ui mac.ui build.xcode beautification code_quality.clang_analysis code_quality.clang_tidy serialization code_quality.submodule_regression integration.addsan integration.mpi integration.release_debug integration.tensorflow integration.thread integration.tutorials integration.ubsan integration.valgrind integration maintenance.documentation performance profile linux.clang.python27.release.PyRosetta4.Debug linux.clang.python35.release.PyRosetta4.Debug linux.clang.python36.release.PyRosetta4.Debug linux.clang.python37.release.PyRosetta4.Debug linux.clang.python27.release.PyRosetta4.MinSizeRel linux.clang.python35.release.PyRosetta4.MinSizeRel linux.clang.python36.release.PyRosetta4.MinSizeRel linux.clang.python37.release.PyRosetta4.MinSizeRel ubuntu.clang.python27.release.PyRosetta4.MinSizeRel ubuntu.clang.python35.release.PyRosetta4.MinSizeRel ubuntu.clang.python36.release.PyRosetta4.MinSizeRel ubuntu.clang.python37.release.PyRosetta4.MinSizeRel linux.clang.python27.release.PyRosetta4.Release linux.clang.python35.release.PyRosetta4.Release linux.clang.python36.release.PyRosetta4.Release linux.clang.python37.release.PyRosetta4.Release ubuntu.clang.python27.release.PyRosetta4.Release ubuntu.clang.python35.release.PyRosetta4.Release ubuntu.clang.python36.release.PyRosetta4.Release ubuntu.clang.python37.release.PyRosetta4.Release release.PyRosetta4.conda.Release release.source scientific.FlexPepDock.debug scientific.FlexPepDock scientific.antibody_grafting.debug scientific.antibody_grafting scientific.antibody_h3_modeling.debug scientific.antibody_h3_modeling scientific.cofactor_binding_sites.debug scientific.ddg_ala_scan.debug scientific.ddg_ala_scan scientific.dock_glycans.debug scientific.dock_glycans scientific.docking.debug scientific.docking scientific.enzyme_design.debug scientific.enzyme_design scientific.ligand_scoring_ranking scientific.loop_modeling_ccd_12res scientific.loop_modeling_ngk_12res scientific.mhc_epitope_energy scientific.mp_dock.debug scientific.mp_domain_assembly.debug scientific.mp_domain_assembly scientific.mp_f19_ddG_of_mutation.debug scientific.mp_f19_ddG_of_mutation scientific.mp_f19_decoy_discrimination.debug scientific.mp_f19_decoy_discrimination scientific.mp_f19_sequence_recovery scientific.mp_lipid_acc.debug scientific.mp_lipid_acc scientific.mp_relax.debug scientific.mp_symdock.debug scientific.protein_data_bank_diagnostic.cif scientific.protein_data_bank_diagnostic.full scientific.relax_fast_5iter scientific.rna_denovo_favorites.debug scientific.sewing.debug scientific.simple_cycpep_predict.debug linux.clang.score linux.gcc.score mac.clang.score linux.scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify unit.addsan linux.clang.unit.release linux.gcc.unit.release unit.ubsan unit.valgrind gcc-9.gcc.unit util.apps

Merge pull request #4464 from CyrusBiotechnology/smlewis/mangle_job_id_with_HOSTNAME This adds an option (`HOSTNAME_in_jobname`) to mangle JD2 job names with $HOSTNAME. In a context where job distribution is not being done inside Rosetta, but instead being done externally, you will run into the case where the low job numbers (like 0001) recur. Instead of managing job completion by moving them around, we can make them unique by mangling them on the host on which they occur. In containerized systems $HOSTNAME is usually set; in kubernetes specifically it includes a hash unique to the problem. The option does nothing if $HOSTNAME is not set.

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Test: linux.clang.integration.tutorials

Failed sub-tests (click for more details):
prepare_ligand protein_design
Test: mac.clang.integration

Failed sub-tests (click for more details):
glycan_tree_relax glycan_tree_relax_build_single
Test: linux.clang.performance

Failed sub-tests (click for more details):
protocols_ligand_docking_LigandDockProtocol
Test: linux.clang.scientific.dock_glycans.debug

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Test: linux.clang.scientific.dock_glycans

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Test: linux.clang.scientific.relax_fast_5iter

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Test: linux.gcc.cxx11thread.mpi.serialization.scientific.simple_cycpep_predict.debug

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