Merge pull request #927 from RosettaCommons/jadolfbr/ab_graft_mover
Add AntibodyCDRGrafter mover
Overview
------------
This PR adds a mover for antibody grafting with settings I've used for antibody design with a RosettaScript implementation that can graft from file or save_pose_mover reference name. It is usually quite fast, and using both graft movers (the default) results in 100% graft closure as measured by bond lengths and angles at the connection points. Unit tests and Docs added.
Documentation:
---------------------
https://www.rosettacommons.org/docs/wiki/scripting_documentation/RosettaScripts/Movers/movers_pages/AntibodyCDRGrafter
Test Changes:
-------------------
No integration test changes expected other than cosmetic changes to antibody designer due to name change of AntibodyDesignModeler.
Sample Script
-------------------
```
<ROSETTASCRIPTS>
<MOVERS>
<AntibodyCDRGrafter name=grafter cdrs=L2,L1,H4 cdr_definition=North numbering_scheme=AHO_Scheme donor_structure_from_pdb=mis_start.pdb use_secondary_graft_mover=1 optimize_cdrs=1 optimize_cdr4_if_neighbor=1/>
</MOVERS>
<PROTOCOLS>
<Add mover_name=grafter/>
</PROTOCOLS>
</ROSETTASCRIPTS>
```