Merge pull request #905 from RosettaCommons/JWLabonte/sugars/input
Carbohydrates: Further simplifying loading-in of glycan-containing PDB files
This merge makes Rosetta is somewhat more robust in handling glycan-containing PDB files. If a system of 3-letter codes is used in the PDB file that does not include main-chain connectivity, Rosetta will now rely on `LINK` records to assign the proper `ResidueType`s.
All unit tests pass.
fold_and_dock has tracer volume jacked way up, so it registers with integration test changes because of more tracer output I also added with this merge.