Merge pull request #869 from RosettaCommons/vmullig/peppredict_boinc
Make the simple_cycpep_predict app into something that runs on BOINC
Tasks completed:
Promote simple_cycpep_predict to a public app.
Move much of its core functionality to protocols.
Move options to options_rosetta.py.
Load options from the options system on initialization, and store values in private member variables.
Modify the minirosetta app to allow the SimpleCycpepPredictApplication class to be called.
Add support for BOINC graphics.
Figure out inputs and outputs.
Figure out a reasonable definition of a work unit.
Add RMSD output to the score in the output silent file.
Test.
Gave the BOINC graphics a little bit of a facelift while I was at it. (Rosetta@Home did celebrate its tenth birthday earlier this month, so it was about time.)
Beauty.
Documentation.