Merge pull request #745 from RosettaCommons/rhiju/remove_RNA_residue_type_set
Getting rid of RNA residue type sets
Last full set of tests: http://benchmark.graylab.jhu.edu/revision?id=2377&branch=
(ran a few more after that, but cancelled after unit & integration. They were just to check merge conflicts.)
Tests look good:
+ Cosmetic change: removal of line loading in rna_residue_type set. But no further changes, as desired.
+ Cosmetic changes: removed unnecessary packer initialization when pack_missing_sidechains() is called but there is nothing to pack. (In a couple tests, exposes warnings about unused options like -packing:use_input_sc.) Sorry, this changes one line in a lot of tests, but I figure folks wouldn't mind removing this extra unnecessary step.
+ cstfile_to_theozyme_pdb, match_1n9l is unstable in integration, unfortunately, despite my prior attempt to fix. Those still run stably in integration.release_debug. Will be setting up a separate branch to try to resolve remaining instabilities.