Merge pull request #523 from RosettaCommons/rfalford12/release_mpframework
Release RosettaMP Framework Applications
All of these applications are described in the paper:
Alford RF, Koehler Leman J, Weitzner BW, Duran AM, Tiley DC, Elazar A, Gray JJ (2015) "An Integrated framework advancing membrane protein modeling and design" PLoS CompBio
Documentation is provided in the Rosetta/demos directory and on the gollum wiki (currently under construction by the XRW team). More info also provided in the README.
Adding the following membrane framework applications to apps/public/membrane for release:
= mp_dock: Membrane protein-protein docking
= mp_dock_setup: Setup application for membrane protein-protein docking
= mp_span_from_pdb: Predict transmembrane spans from the PDB
= mp_transform: Transform protein into the membrane coordinate frame
= mp_symdock: Assemble C-Symmetric membrane pose in the bilayer
= mp_viewer: Visualize membrane planes via the PyMOL Mover
= mp_relax: High resolution refinement of membrane proteins (RosettaScripts)
= mp_ddG: Predict ddGs for membrane proteins (PyRosetta script)
Testing:
mp_dock, mp_symdock, and mp_relax have integration tests. The remaining apps encapsulate single movers and are tested via unit test.
Test Changes:
mp_dock and mp_symdock expected because command files changed