Merge pull request #116 from RosettaCommons/nollikai/coupled_moves
Adding coupled_moves application and integration test
coupled_moves is a simple design application that runs a constant temperature Monte Carlo simulation using the CoupledMover, a new mover that performs coupled side-chain / backbone moves as well as coupled ligand rigid-body rotation, translation and rotamer optimization.
All sequences that are accepted during the simulation are recorded and are output in a fasta file at the end of the simulation. This application is useful for predicting the set of tolerated sequences for a given design problem and makes it very easy to incorporate backbone flexibility into design.