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  1. toyfold3 toyfold3 Public

    RNA convolutions, ensembles, free energies in 3D

    Jupyter Notebook 5 1

  2. loop_close loop_close Public

    Scripts used to derive 6D potential for RNA loop_close

    Scala 2

  3. rhiju_python rhiju_python Public

    Rhiju Das' python scripts from https://svn.rosettacommons.org/source/workspaces/rhiju/python

    Python 3

  4. matlab_scripts matlab_scripts Public

    collection of useful matlab scripts

    MATLAB

  5. codon_riboswitch codon_riboswitch Public

    Jupyter Notebook

  6. condensing_macromolecules condensing_macromolecules Public

    Simulations of biomolecule condensation for Stanford BIOC/BIOP/SBIO/BIOE 241

    Rich Text Format

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Contribution activity

July 2025

Created 1 commit in 1 repository

Created an issue in jwohlwend/boltz that received 1 comment

contact_constraints

We'd love to test RNA modeling with known/alternative secondary structure through the contact-based steering code in Boltz-2. However, the current …

1 comment
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