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branch: commits 「№20216」
Commited by: nannemdp
GitHub commit link: 「349059559bff0dc4」
Commit date: 2023-10-05 14:55:01
code_quality.beautify

added line to parse_my_tag function so "refine" option is parsed.

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branch: commits 「№20215」
Commited by: nannemdp
GitHub Pull Request link: 「№6449」
Merge: 「96fa3c54b」← 「349059559」  code diff
Scheduled at: 2023-10-05 11:02:03.058147
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
linux.clang.cxx11thread.serialization.python37.PyRosetta.unit mac.clang.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.pytorch integration.release_debug integration.tensorflow integration.thread integration performance profile linux.clang.score linux.gcc.score mac.clang.score linux.scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №6449 master←nannemdp/adding_refine_option_to_parse_my_tag_of_GlycanSampler_mover Merge: 96fa3c54b9f6e46b5bfdeb343261506bc4369812←349059559bff0dc48934cb3a11080b1f5c5dfbb5 adding refine option to parse_my_tag of GlycanSampler mover ---------------- Merge commit message: added line to parse_my_tag function so "refine" option is parsed.

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Test: linux.gcc.code_quality.beautification

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Test: linux.gcc.mpi.serialization.integration.mpi

Failed sub-tests (click for more details):
replica_docking


branch: commits 「№20214」
Commited by: gfzhou
GitHub Pull Request link: 「№6448」
Merge: 「96fa3c54b」← 「254887ca0」  code diff
Scheduled at: 2023-10-05 03:22:39.421383
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
linux.clang.cxx11thread.serialization.python37.PyRosetta.unit mac.clang.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.pytorch integration.release_debug integration.tensorflow integration.thread integration performance profile linux.clang.score linux.gcc.score mac.clang.score linux.scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №6448 master←guangfeng/galiganddock_vsx_update Merge: 96fa3c54b9f6e46b5bfdeb343261506bc4369812←254887ca0ec2b00714c55c6481becc2c5bd25605 GALigandDock update ---------------- Merge commit message: beautifying

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Test: linux.gcc.mpi.serialization.integration.mpi

Failed sub-tests (click for more details):
replica_docking


branch: commits 「№20213」
Commited by: gfzhou
GitHub commit link: 「eebaa4563df4ff41」
Commit date: 2023-10-05 07:13:34
code_quality.beautify

Merge branch 'master' of github.com:RosettaCommons/main into guangfeng/galiganddock_vsx_update

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branch: commits 「№20212」
Commited by: nannemdp
GitHub Pull Request link: 「№6447」
Merge: 「fd93346ab」← 「9c19fef04」  code diff
Scheduled at: 2023-10-03 17:26:51.347499
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
linux.clang.cxx11thread.serialization.python37.PyRosetta.unit mac.clang.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.pytorch integration.release_debug integration.tensorflow integration.thread integration performance profile linux.clang.score linux.gcc.score mac.clang.score linux.scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №6447 master←nannemdp/correcting_xml_schema_to_match_parse_my_tag_of_DihedralConstraintsGenerator Merge: fd93346ab8e3317e20d7bbe95233b5eba4ab9f0f←9c19fef0427b6027d353838c260b19c1acde6880 Correcting xml schema to match parse_tag of DihedralConstraintsGenerator ---------------- Merge commit message: small change so that the xml schema and the parse_my_tag functions use mathcing terms. Specifically, changed "dihedral_resnums" to "dihedral_residues". No functionality should differ.

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Test: linux.gcc.mpi.serialization.integration.mpi

Failed sub-tests (click for more details):
replica_docking
Test: linux.clang.tensorflow.integration.tensorflow

Failed sub-tests (click for more details):
tensorflow_manager


branch: commits 「№20211」
Commited by: Labonte
GitHub Pull Request link: 「№6410」
Merge: 「be9206938」← 「a370bca7d」  code diff
Scheduled at: 2023-09-27 14:18:36.137924
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
gcc-9.gcc.build.debug integration.release_debug integration gcc-9.gcc.unit m1.clang.python39.unit

Pull Request №6410 master←acassell1/Chlorination-1 Merge: be92069389921d63b734b63c5a8e58bff55c97df←a370bca7d3ff963448582faa1cc554bf430c6402 Carbohydrates: Adding chlorination ---------------- Merge commit message: think that I might need -mute all off also :(

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branch: commits 「№20210」
Commited by: Labonte
GitHub Pull Request link: 「№6410」
Merge: 「be9206938」← 「e8e3eb6dc」  code diff
Scheduled at: 2023-09-25 14:12:11.878510
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
gcc-9.gcc.build.debug integration.release_debug integration gcc-9.gcc.unit m1.clang.python39.unit

Pull Request №6410 master←acassell1/Chlorination-1 Merge: be92069389921d63b734b63c5a8e58bff55c97df←e8e3eb6dce079a7782f6a1396c0ea250b3ddcd14 Carbohydrates: Adding chlorination ---------------- Merge commit message: dummy post to retrigger testing, because I was too busy to check the log before it vanished :(

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branch: commits 「№20209」
Commited by: moritzertelt
GitHub Pull Request link: 「№6428」
Merge: 「8e2068a4e」← 「68b77381d」  code diff
Scheduled at: 2023-09-21 15:10:49.071048
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
linux.clang.cxx11thread.serialization.python37.PyRosetta.unit mac.clang.python310.PyRosetta.unit mac.clang.python38.PyRosetta.unit mac.clang.python39.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug graphics static torch.gcc.pytorch.python39.build.release beautification ubuntu.clang.code_quality.cppcheck ubuntu.gcc.code_quality.cppcheck code_quality.merge_size serialization linux.clang.code_quality.submodule_regression linux.gcc.code_quality.submodule_regression integration.mpi integration.pytorch integration.release_debug integration.tensorflow integration.thread integration performance profile linux.clang.score linux.gcc.score mac.clang.score linux.scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №6428 master←moritzertelt/per_residue_probabilities_mpnn Merge: 8e2068a4eb74cbb1a14335fab8254a5094600cae←68b77381de545093cf211f93c57771b170c91a13 Add a PerResidueProbabilitiesMetric for ProteinMPNN ---------------- Merge commit message: address Roccos comments

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Test: linux.gcc.mpi.serialization.integration.mpi

Failed sub-tests (click for more details):
replica_docking
Test: linux.clang.tensorflow.integration.tensorflow

Failed sub-tests (click for more details):
esm_model_perplexity


branch: commits 「№20208」
Commited by: Sergey Lyskov
GitHub Pull Request link: 「№6441」
Merge: 「8e2068a4e」← 「a18decbe1」  code diff
Scheduled at: 2023-09-19 17:25:00.436222
gcc-12.gcc.serialization.python312.PyRosetta.notebook gcc-9.gcc.serialization.python311.PyRosetta.notebook gcc-9.gcc.serialization.python312.PyRosetta.notebook linux.clang.cxx11thread.serialization.python312.PyRosetta.unit linux.clang.cxx11thread.serialization.python37.PyRosetta.unit linux.clang.cxx11thread.serialization.python38.PyRosetta.unit linux.clang.python312.PyRosetta.unit m1.clang.python312.PyRosetta.unit mac.clang.python312.PyRosetta.unit linux.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release m1.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release mac.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release linux.gcc.python312.self.python m1.clang.python312.self.python mac.clang.python312.self.python ubuntu.gcc.python312.self.python

Pull Request №6441 master←sergey/binder Merge: 8e2068a4eb74cbb1a14335fab8254a5094600cae←a18decbe1c06ce283740e56862932b9d50f1176e adding support for PyRosetta builds with Python-3.12 ---------------- Merge commit message: adding support for PyRosetta builds with Python-3.12

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Test: gcc-9.gcc.serialization.python312.PyRosetta.notebook

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Test: linux.clang.cxx11thread.serialization.python312.PyRosetta.unit

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Test: m1.clang.python312.PyRosetta.unit

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Test: linux.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release

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Test: m1.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release

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Test: mac.clang.cxx11thread.serialization.python312.release.PyRosetta.conda.Release

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Test: m1.clang.python312.self.python

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branch: commits 「№20207」
Commited by: Rocco Moretti
GitHub Pull Request link: 「№6440」
Merge: 「fa8215268」← 「2a35b2304」  code diff
Scheduled at: 2023-09-19 05:38:43.044337
foldit.build.debug foldit.build.release foldit.defines foldit.levels foldit.unit.debug foldit.unit.release

Pull Request №6440 interactive/develop←roccomoretti/interactive_fix_dna_idealize Merge: fa8215268a7df745c94a1f04d74ea5dc7619392e←2a35b2304e973cef2c77875ffc8bf0d08b38abe9 [Foldit] Bug fix for idealization of DNA-containing poses. ---------------- Merge commit message: Fix idealization of DNA-containing poses.

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Test: mac.clang.foldit.build.release

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branch: commits 「№20206」
Commited by: Jared Adolf-Bryfogle
GitHub Pull Request link: 「№6438」
Merge: 「76e2f63f7」← 「6b6aaee51」  code diff
Scheduled at: 2023-09-18 15:25:10.903816
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
linux.clang.cxx11thread.serialization.python37.PyRosetta.unit mac.clang.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration performance profile linux.clang.score linux.gcc.score mac.clang.score linux.scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №6438 master←jadolfbr/fix_pdb_load Merge: 76e2f63f750b32d50338385a5e1d99ecb36da226←6b6aaee512a2edc0b3e6030fc6a9736935598fa2 Jadolfbr/fix pdb load ---------------- Merge commit message: beautifying

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Test: linux.gcc.mpi.serialization.integration.mpi

Failed sub-tests (click for more details):
replica_docking
Test: linux.gcc.cxx11thread.integration.thread

Failed sub-tests (click for more details):
multithreaded_fastdesign


branch: commits 「№20205」
Commited by: Jared Adolf-Bryfogle
GitHub commit link: 「4c0d6e2d0b544fcb」
Commit date: 2023-09-15 22:58:10
code_quality.beautify

Merge branch 'master' into jadolfbr/fix_pdb_load

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branch: commits 「№20204」
Commited by: Yang Hsia
GitHub Pull Request link: 「№6437」
Merge: 「76e2f63f7」← 「a08f6458f」  code diff
Scheduled at: 2023-09-18 12:48:50.813514
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
linux.clang.cxx11thread.serialization.python37.PyRosetta.unit mac.clang.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration performance profile linux.clang.score linux.gcc.score mac.clang.score linux.scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №6437 master←yhsia/ddgfilter_missing_repack_unbound Merge: 76e2f63f750b32d50338385a5e1d99ecb36da226←a08f6458fbd3d6556af5d32d5a00c60fc52ded95 hooked up `repack_unbound` in `ddGFilter.cc` ---------------- Merge commit message: restored DumpPDB

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Test: linux.gcc.mpi.serialization.integration.mpi

Failed sub-tests (click for more details):
replica_docking
Test: linux.gcc.cxx11thread.integration.thread

Failed sub-tests (click for more details):
multithreaded_fastdesign


branch: commits 「№20203」
Commited by: MoritzErtelt
GitHub Pull Request link: 「№6439」
Merge: 「76e2f63f7」← 「80dc9dd63」  code diff
Scheduled at: 2023-09-18 04:52:05.160494
integration.mpi integration.release_debug integration.thread integration

Pull Request №6439 master←moritzertelt/sample_seq_from_probs Merge: 76e2f63f750b32d50338385a5e1d99ecb36da226←80dc9dd63402edc577210f17cf750f8057972701 Add support for saving, loading and using PerResidueProbabilities for design ---------------- Merge commit message: index change when using WeightedSampler instead of std::discrete_distribution

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Test: linux.gcc.mpi.serialization.integration.mpi

Failed sub-tests (click for more details):
replica_docking
Test: linux.gcc.cxx11thread.integration.thread

Failed sub-tests (click for more details):
multithreaded_fastdesign


branch: commits 「№20202」
Commited by: moritzertelt
GitHub Pull Request link: 「№6439」
Merge: 「76e2f63f7」← 「cda888e0d」  code diff
Scheduled at: 2023-09-17 13:47:31.467017
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
linux.clang.cxx11thread.serialization.python37.PyRosetta.unit mac.clang.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration performance profile linux.clang.score linux.gcc.score mac.clang.score linux.scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №6439 master←moritzertelt/sample_seq_from_probs Merge: 76e2f63f750b32d50338385a5e1d99ecb36da226←cda888e0d4f514ea71af90c58304f202687b7b30 Add support for saving, loading and using PerResidueProbabilities for design ---------------- Merge commit message: missing space

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Test: linux.gcc.mpi.serialization.integration.mpi

Failed sub-tests (click for more details):
replica_docking
Test: linux.gcc.cxx11thread.integration.thread

Failed sub-tests (click for more details):
multithreaded_fastdesign


branch: commits 「№20201」
Commited by: moritzertelt
GitHub Pull Request link: 「№6439」
Merge: 「76e2f63f7」← 「4df3cd9f4」  code diff
Scheduled at: 2023-09-17 12:35:05.883904
linux.clang linux.gcc linux.srlz mac.clang
debug
release
unit
linux.clang.cxx11thread.serialization.python37.PyRosetta.unit mac.clang.python38.PyRosetta.unit mpi mpi.serialization build.header build.levels build.ninja_debug beautification code_quality.cppcheck code_quality.merge_size serialization code_quality.submodule_regression integration.mpi integration.release_debug integration.tensorflow integration.thread integration performance profile linux.clang.score linux.gcc.score mac.clang.score linux.scripts.pyrosetta scripts.rosetta.parse scripts.rosetta.validate scripts.rosetta.verify util.apps windows.build.debug windows.build.release

Pull Request №6439 master←moritzertelt/sample_seq_from_probs Merge: 76e2f63f750b32d50338385a5e1d99ecb36da226←4df3cd9f4dd22b971f85d890e4089eb8100d964f Add support for saving, loading and using PerResidueProbabilities for design ---------------- Merge commit message: attempting to fix mac clang build

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Test: mac.clang.python38.PyRosetta.unit

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Test: mac.clang.build.debug

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Test: mac.clang.build.release

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Test: linux.gcc.mpi.serialization.integration.mpi

Failed sub-tests (click for more details):
replica_docking
Test: linux.gcc.cxx11thread.integration.thread

Failed sub-tests (click for more details):
multithreaded_fastdesign
Test: mac.clang.python39.integration

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Test: mac.clang.score

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