Pull Request №5551 RosettaCommons/main/master ← RosettaCommons/main/Rituparnasamanta/membrane-pH-energy Merge: 16053a988b826295a0609b92328089e5aed0ce7e←4dbcda237bf7b12abcce32ede7fff63bd774008c Rituparnasamanta/membrane pH energy ---------------- Merge commit message: adding teh most recent master

• Summary
• linux.clang.cxx11thread.serialization.python37.PyRosetta.unit
• linux.gcc.cxx11thread.serialization.build.debug
• mpi.serialization
• beautification
• code_quality.merge_size
• serialization 「1」
• integration.mpi
• integration.release_debug 「11」
• integration.tensorflow 「1」
• integration.thread 「1」
• integration 「11」
• linux.clang.score 「1」
• linux.gcc.score 「1」
• mac.clang.score 「1」
• linux.gcc.cxx11thread.serialization.unit

Pull Request №5551 RosettaCommons/main/master ← RosettaCommons/main/Rituparnasamanta/membrane-pH-energy Merge: 77416ff00d9502e23689b6dcbd70a91fa060d887←99562de28fc8577135591851b781612b5433c4ed Rituparnasamanta/membrane pH energy ---------------- Merge commit message: adding the electrostaic field variables to serialization load and save functions

• Summary
• profile 「1」

removed pore_transition_steepness_ since its there in MembraneGeometry.cc (verified by Hope). added a sfxn_fingerprinting test similar to Franklin2019

• Summary

Pull Request №6478 RosettaCommons/main/master ← RosettaCommons/main/roccomoretti/submodule_tweak Merge: 44a2f03f080e346089d9ee3f410647be83a1c0a7←92dc16ac0c87ea14a16641017ce4a977f71fd41a Adjust the git submodule paths for Forking potential. ---------------- Merge commit message: Also update submodules to their most recent master state.

• Summary
• integration.mpi 「1」

Pull Request №6478 RosettaCommons/main/master ← RosettaCommons/main/roccomoretti/submodule_tweak Merge: 44a2f03f080e346089d9ee3f410647be83a1c0a7←d87c4db14074301479f7f2cb7e4cfc213b5e5d29 Adjust the git submodule paths for Forking potential. ---------------- Merge commit message: Adjust the git submodule paths. We use relative paths for many of the RosettaCommons submodules, to allow for https/ssh flexibility. However, for the open repository if someone were working off a fork, they wouldn't be able to get the submodules unless they also forked the submodule. To fix that, we can be explicit about the RosettaCommons organization in the submodule URL.

• Summary

Pull Request №5551 RosettaCommons/main/master ← RosettaCommons/main/Rituparnasamanta/membrane-pH-energy Merge: 77416ff00d9502e23689b6dcbd70a91fa060d887←b1067d21ba4015953fd8a9be9d9ca187eb06db20 Rituparnasamanta/membrane pH energy ---------------- Merge commit message: removed pore_transition_steepness_ since its there in MembraneGeometry.cc (verified by Hope). added a sfxn_fingerprinting test similar to Franklin2019

• Summary
• beautification
• code_quality.merge_size
• serialization 「1」
• integration.mpi 「4」
• integration.release_debug 「14」
• integration.tensorflow 「1」
• integration.thread 「1」
• integration 「13」
• profile 「1」
• linux.clang.score 「1」
• linux.gcc.score 「1」
• mac.clang.score 「1」

Pull Request №6477 RosettaCommons/main/master ← RosettaCommons/main/roccomoretti/pilot_app_trim Merge: 44a2f03f080e346089d9ee3f410647be83a1c0a7←9545785881a0289563e66a34628c7dc05556550c Clean up pilot apps ---------------- Merge commit message: Clean up pilot apps Especially now that we'll be exposing pilot apps to 'regular' users with the open repo, we probably don't need to be compiling all the pilot apps we are. The general concept here is that if the app isn't tested with an integration test, it probably isn't important enough to be generally compiled. If you're seeing this in the future (e.g. from a git blame) feel free to uncomment any of these apps, but I'd *HIGHLY* recommend also adding an integration test with a short sample run, to avoid this sort of issue in the future.

• Summary
• integration.mpi 「1」

Pull Request №5551 RosettaCommons/main/master ← RosettaCommons/main/Rituparnasamanta/membrane-pH-energy Merge: 77416ff00d9502e23689b6dcbd70a91fa060d887←ab5f99f3329be8223c679ee66b08322acc8f9971 Rituparnasamanta/membrane pH energy ---------------- Merge commit message: changing the value of dGfreeB for OOC from 9.269 to 9.2649 (old correct version), there was a typo

• Summary
• mac.clang.build.debug
• mac.clang.build.release
• beautification
• code_quality.merge_size
• serialization 「1」
• integration.mpi 「4」
• integration.release_debug 「13」
• integration.tensorflow 「1」
• integration.thread 「1」
• integration
• profile 「1」
• mac.clang.score
• mac.clang.unit

Pull Request №6475 RosettaCommons/main/master ← RosettaCommons/main/benchmark Merge: c295d8ba33fafdfe252cee860ec678bf2920e83a←adb7fd03faa1902e57843bb6bd9f311641b1d7e6 adding self.info test ---------------- Merge commit message: updating self.info

• Summary

Pull Request №6476 RosettaCommons/main/master ← RosettaCommons/main/roccomoretti/mp_f19_relax_test Merge: 061fc94f96970211ed614a486f14e62138206ced←3a0a9f5d5a5068b45611f36cd0fd07c3e395ee55 Test for mp_f19_decoy_discrimination failure ---------------- Merge commit message: Merge remote-tracking branch 'origin/master' into roccomoretti/mp_f19_relax_test

• Summary
• integration.release_debug 「2」
• integration 「2」

Pull Request №6475 RosettaCommons/main/master ← RosettaCommons/main/benchmark Merge: c295d8ba33fafdfe252cee860ec678bf2920e83a←255a3e0178939dded309578e91179b0eeb4a7f53 adding self.info test ---------------- Merge commit message: updating self.info test

• Summary
• code_quality.clang_tidy 「7」
• integration.mpi 「1」
• integration.release_debug 「3」
• integration 「2」

Test server updating documentation submodule

• Summary
• integration.mpi 「1」
• integration.release_debug 「2」
• integration 「2」

Pull Request №5551 RosettaCommons/main/master ← RosettaCommons/main/Rituparnasamanta/membrane-pH-energy Merge: 77416ff00d9502e23689b6dcbd70a91fa060d887←45468669df4f78fe23ce65b7ba0cb31f4801f032 Rituparnasamanta/membrane pH energy ---------------- Merge commit message: namespace corrected

• Summary
• mac.clang.build.debug
• mac.clang.build.release
• beautification
• code_quality.merge_size
• serialization 「1」
• integration.mpi 「4」
• integration.release_debug 「13」
• integration.tensorflow 「1」
• integration.thread 「1」
• integration
• profile 「1」
• linux.clang.score 「1」
• linux.gcc.score 「1」
• mac.clang.score
• mac.clang.unit

Pull Request №5551 RosettaCommons/main/master ← RosettaCommons/main/Rituparnasamanta/membrane-pH-energy Merge: 77416ff00d9502e23689b6dcbd70a91fa060d887←b2aaa85cb19163b68d23384a822dddefa8dcd980 Rituparnasamanta/membrane pH energy ---------------- Merge commit message: adding override, and removing pHvariantTask.hh

• Summary
• linux.clang.cxx11thread.serialization.python37.PyRosetta.unit
• mac.clang.python38.PyRosetta.unit
• linux.clang.build.debug
• linux.gcc.build.debug
• linux.gcc.cxx11thread.serialization.build.debug
• mpi
• mpi.serialization
• mac.clang.build.debug
• build.ninja_debug
• linux.clang.build.release
• linux.gcc.build.release
• mac.clang.build.release
• beautification
• code_quality.merge_size
• serialization 「2」
• integration.mpi
• integration.pytorch
• integration.release_debug
• integration.tensorflow
• integration.thread
• integration
• performance
• profile
• linux.clang.score
• linux.gcc.score
• mac.clang.score
• scripts.pyrosetta
• scripts.rosetta.parse
• scripts.rosetta.validate
• scripts.rosetta.verify
• linux.clang.unit
• linux.gcc.cxx11thread.serialization.unit
• linux.gcc.unit
• mac.clang.unit
• windows.build.debug
• windows.build.release

Pull Request №6474 RosettaCommons/main/master ← RosettaCommons/main/roccomoretti/fix_tests Merge: c295d8ba33fafdfe252cee860ec678bf2920e83a←fbc37d049122040e39199b44067946884babc1e0 Attempt to fix tests in master ---------------- Merge commit message: Attempt to fix transform_loodo clang tidy error (again)

• Summary

Pull Request №6474 RosettaCommons/main/master ← RosettaCommons/main/roccomoretti/fix_tests Merge: c295d8ba33fafdfe252cee860ec678bf2920e83a←57a5938aa9208516f50fe39611657c5097897407 Attempt to fix tests in master ---------------- Merge commit message: Fix script

• Summary
• scientific.make_fragments.debug

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