Merge pull request #1556 from RosettaCommons/vmullig/sample_cispro
Add an option to simple_cycpep_predict to sample cis-omega values preceding D/L proline
This can be expanded later to include positions preceding N-methyl positions, too.
Tasks:
- Add option.
- Add code to do the sampling (the sample_cis_peptide_bond GeneralizedKICPerturber).
- Add integration test.
- Documentation.
- Beauty.
All tests pass except for the following integration tests:
- bridge_chains (known instability that Tom's fixing)
- simple_cycpep_predict_cispro (just added)