Merge pull request #1391 from RosettaCommons/vmullig/avoid_iplus1
In SimpleCycpepPredictApplication, prevent the countng of hydrogen bonds to adjacent residues. This is a common pathology that inflates the hydrogen bond count.
Tasks:
- Add an option for preventing counting of hydrogen bonds to adjacent residues (default true).
- Have this option set up ResidueSelectors based on the pose geometry.
- Documentation.
- Beauty.