Merge pull request #973 from RosettaCommons/rhiju/stepwise_lores_with_submotif_info
Rhiju/stepwise lores with submotif info
+ three rna tests (rna_denovo_bps, rna_denovo_bps_fixed_ends, and stepwise_lores) are expected to change due to a bug fix in closing chainbreaks in FARNA with base pair steps.
+ code_template_tests_src does not run in master (but a fix went in after these tests were queued)
+ mm_params changes -- one of those sporadic errors, presumably due to an ambiguous sort.
+ performance and profile have not run, but they appear to not be running on recent master commits.
+ unit test: CarbohydratePoseIOTests:test_sugar_modifications_from_suffix is broken -- as discussed on developer's list, this is a sporadic error.